RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 MTX1Q13505 466 aa16.58■□□□□ 0.24
NUDCD3-201ENST00000338427 RASGRF1Q13972 1273 aa16.58■□□□□ 0.24
NUDCD3-201ENST00000338427 ZKSCAN2Q63HK3 967 aa16.58■□□□□ 0.24
NUDCD3-201ENST00000338427 FAM83AQ86UY5 434 aa16.58■□□□□ 0.24
NUDCD3-201ENST00000338427 BRI3BPQ8WY22 251 aa16.58■□□□□ 0.24
NUDCD3-201ENST00000338427 OTUD5Q96G74 571 aa16.58■□□□□ 0.24
NUDCD3-201ENST00000338427 CFHR5Q9BXR6 569 aa16.58■□□□□ 0.24
NUDCD3-201ENST00000338427 TMOD2Q9NZR1 351 aa16.58■□□□□ 0.24
NUDCD3-201ENST00000338427 FAM198AQ9UFP1 575 aa16.58■□□□□ 0.24
NUDCD3-201ENST00000338427 ABCF2Q9UG63 623 aa16.58■□□□□ 0.24
NUDCD3-201ENST00000338427 SNCAIPQ9Y6H5 919 aa16.58■□□□□ 0.24
NUDCD3-201ENST00000338427 ARAP2Q8WZ64 1704 aa16.57■□□□□ 0.24
NUDCD3-201ENST00000338427 MAST3O60307 1309 aa16.57■□□□□ 0.24
NUDCD3-201ENST00000338427 TESPA1A2RU30 521 aaPredicted RBP16.57■□□□□ 0.24
NUDCD3-201ENST00000338427 ALDH1A1P00352 501 aa16.57■□□□□ 0.24
NUDCD3-201ENST00000338427 RLBP1P12271 317 aa16.57■□□□□ 0.24
NUDCD3-201ENST00000338427 INPP5BP32019 993 aa16.57■□□□□ 0.24
NUDCD3-201ENST00000338427 FKBP1CQ5VVH2 108 aa16.57■□□□□ 0.24
NUDCD3-201ENST00000338427 PI16Q6UXB8 463 aa16.57■□□□□ 0.24
NUDCD3-201ENST00000338427 TBC1D9Q6ZT07 1266 aa16.57■□□□□ 0.24
NUDCD3-201ENST00000338427 FAM151AQ8WW52 585 aa16.57■□□□□ 0.24
NUDCD3-201ENST00000338427 CCL15-CCL14A0A0B4J2E2 113 aa16.56■□□□□ 0.24
NUDCD3-201ENST00000338427 G3BP1Q13283 466 aaKnown RBP eCLIP16.56■□□□□ 0.24
NUDCD3-201ENST00000338427 CCL15Q16663 113 aa16.56■□□□□ 0.24
NUDCD3-201ENST00000338427 WRNIP1Q96S55 665 aa16.56■□□□□ 0.24
NUDCD3-201ENST00000338427 CSADQ9Y600 493 aa16.56■□□□□ 0.24
NUDCD3-201ENST00000338427 SALL1Q9NSC2 1324 aa16.55■□□□□ 0.24
NUDCD3-201ENST00000338427 NOM1Q5C9Z4 860 aaKnown RBP16.55■□□□□ 0.24
NUDCD3-201ENST00000338427 FAM43AQ8N2R8 423 aa16.55■□□□□ 0.24
NUDCD3-201ENST00000338427 CD99L2Q8TCZ2 262 aa16.55■□□□□ 0.24
NUDCD3-201ENST00000338427 ZNF384Q8TF68 577 aa16.55■□□□□ 0.24
NUDCD3-201ENST00000338427 HMG20BQ9P0W2 317 aa16.55■□□□□ 0.24
NUDCD3-201ENST00000338427 AKAP2Q9Y2D5 859 aa16.55■□□□□ 0.24
NUDCD3-201ENST00000338427 OTOFQ9HC10 1997 aa16.55■□□□□ 0.24
NUDCD3-201ENST00000338427 IRF6O14896 467 aa16.54■□□□□ 0.24
NUDCD3-201ENST00000338427 SEMA3EO15041 775 aa16.54■□□□□ 0.24
NUDCD3-201ENST00000338427 ATP8B2P98198 1209 aa16.54■□□□□ 0.24
NUDCD3-201ENST00000338427 SH3BP5LQ7L8J4 393 aa16.54■□□□□ 0.24
NUDCD3-201ENST00000338427 TRIM17Q9Y577 477 aa16.54■□□□□ 0.24
NUDCD3-201ENST00000338427 MYH13Q9UKX3 1938 aa16.53■□□□□ 0.24
NUDCD3-201ENST00000338427 SPDYE5A6NIY4 337 aa16.53■□□□□ 0.24
NUDCD3-201ENST00000338427 ZBTB7BO15156 539 aaPredicted RBP16.53■□□□□ 0.24
NUDCD3-201ENST00000338427 ECM2O94769 699 aaPredicted RBP16.53■□□□□ 0.24
NUDCD3-201ENST00000338427 RGS3P49796 1198 aa16.53■□□□□ 0.24
NUDCD3-201ENST00000338427 POLA2Q14181 598 aa16.53■□□□□ 0.24
NUDCD3-201ENST00000338427 GORABQ5T7V8 394 aa16.53■□□□□ 0.24
NUDCD3-201ENST00000338427 OTUD7BQ6GQQ9 843 aa16.53■□□□□ 0.24
NUDCD3-201ENST00000338427 FBXO46Q6PJ61 603 aaPredicted RBP16.53■□□□□ 0.24
NUDCD3-201ENST00000338427 OTOP1Q7RTM1 612 aa16.53■□□□□ 0.24
NUDCD3-201ENST00000338427 ZNF341Q9BYN7 854 aa16.53■□□□□ 0.24
NUDCD3-201ENST00000338427 DDX4Q9NQI0 724 aaKnown RBP16.53■□□□□ 0.24
NUDCD3-201ENST00000338427 SNRKQ9NRH2 765 aa16.53■□□□□ 0.24
NUDCD3-201ENST00000338427 AK9Q5TCS8 1911 aa16.53■□□□□ 0.24
NUDCD3-201ENST00000338427 GTF2A2P52657 109 aa16.52■□□□□ 0.24
NUDCD3-201ENST00000338427 MECOMQ03112 1051 aa16.52■□□□□ 0.24
NUDCD3-201ENST00000338427 PKN2Q16513 984 aaKnown RBP16.52■□□□□ 0.24
NUDCD3-201ENST00000338427 ERO1BQ86YB8 467 aa16.52■□□□□ 0.24
NUDCD3-201ENST00000338427 DZIP1Q86YF9 867 aaKnown RBP16.52■□□□□ 0.24
NUDCD3-201ENST00000338427 PANK1Q8TE04 598 aa16.52■□□□□ 0.24
NUDCD3-201ENST00000338427 ZNF112Q9UJU3 913 aa16.52■□□□□ 0.24
NUDCD3-201ENST00000338427 DDTLA6NHG4 134 aaPredicted RBP16.51■□□□□ 0.23
NUDCD3-201ENST00000338427 BTBD19C9JJ37 291 aa16.51■□□□□ 0.23
NUDCD3-201ENST00000338427 SURF6O75683 361 aaKnown RBP16.51■□□□□ 0.23
NUDCD3-201ENST00000338427 BTDP43251 543 aa16.51■□□□□ 0.23
NUDCD3-201ENST00000338427 SP3Q02447 781 aa16.51■□□□□ 0.23
NUDCD3-201ENST00000338427 MVPQ14764 893 aaKnown RBP16.51■□□□□ 0.23
NUDCD3-201ENST00000338427 TAF1CQ15572 869 aaPredicted RBP16.51■□□□□ 0.23
NUDCD3-201ENST00000338427 DCAF15Q66K64 600 aa16.51■□□□□ 0.23
NUDCD3-201ENST00000338427 ERICH6Q7L0X2 663 aa16.51■□□□□ 0.23
NUDCD3-201ENST00000338427 ITPRIPQ8IWB1 547 aa16.51■□□□□ 0.23
NUDCD3-201ENST00000338427 SPATA5Q8NB90 893 aa16.51■□□□□ 0.23
NUDCD3-201ENST00000338427 GAKO14976 1311 aa16.5■□□□□ 0.23
NUDCD3-201ENST00000338427 WDHD1O75717 1129 aaPredicted RBP16.5■□□□□ 0.23
NUDCD3-201ENST00000338427 MCAMP43121 646 aa16.5■□□□□ 0.23
NUDCD3-201ENST00000338427 PICALMQ13492 652 aa16.5■□□□□ 0.23
NUDCD3-201ENST00000338427 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.5■□□□□ 0.23
NUDCD3-201ENST00000338427 SSH3Q8TE77 659 aa16.5■□□□□ 0.23
NUDCD3-201ENST00000338427 FAM163AQ96GL9 167 aaPredicted RBP16.5■□□□□ 0.23
NUDCD3-201ENST00000338427 DBNDD2Q9BQY9 259 aa16.5■□□□□ 0.23
NUDCD3-201ENST00000338427 MYH2Q9UKX2 1941 aa16.5■□□□□ 0.23
NUDCD3-201ENST00000338427 PHF20L1A8MW92 1017 aa16.49■□□□□ 0.23
NUDCD3-201ENST00000338427 RHBDL3P58872 404 aa16.49■□□□□ 0.23
NUDCD3-201ENST00000338427 PPIL2Q13356 520 aa16.49■□□□□ 0.23
NUDCD3-201ENST00000338427 SPTY2D1Q68D10 685 aaPredicted RBP16.49■□□□□ 0.23
NUDCD3-201ENST00000338427 ZSCAN29Q8IWY8 852 aaPredicted RBP16.49■□□□□ 0.23
NUDCD3-201ENST00000338427 ZGPATQ8N5A5 531 aaKnown RBP16.49■□□□□ 0.23
NUDCD3-201ENST00000338427 IDI2Q9BXS1 227 aa16.49■□□□□ 0.23
NUDCD3-201ENST00000338427 CCDC8Q9H0W5 538 aaPredicted RBP16.49■□□□□ 0.23
NUDCD3-201ENST00000338427 ZFYVE28Q9HCC9 887 aa16.49■□□□□ 0.23
NUDCD3-201ENST00000338427 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.49■□□□□ 0.23
NUDCD3-201ENST00000338427 GPR75-ASB3A0A0A6YYF3 556 aa16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 ZBTB22O15209 634 aa16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 CETPP11597 493 aa16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 ARID4AP29374 1257 aaPredicted RBP16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 PPATQ06203 517 aa16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 OS9Q13438 667 aaPredicted RBP16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 SNAPC2Q13487 334 aa16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 TNNI3KQ59H18 835 aa16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 CCDC84Q86UT8 332 aaPredicted RBP16.48■□□□□ 0.23
NUDCD3-201ENST00000338427 FTSJ3Q8IY81 847 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms