RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 NFIAQ12857 509 aa25.78■■□□□ 1.72
RAB28-203ENST00000338176 EAF2Q96CJ1 260 aaPredicted RBP25.78■■□□□ 1.72
RAB28-203ENST00000338176 DZIP1Q86YF9 867 aaKnown RBP25.77■■□□□ 1.72
RAB28-203ENST00000338176 ZGPATQ8N5A5 531 aaKnown RBP25.77■■□□□ 1.72
RAB28-203ENST00000338176 RNF186Q9NXI6 227 aa25.77■■□□□ 1.72
RAB28-203ENST00000338176 DBNLQ9UJU6 430 aaKnown RBP25.77■■□□□ 1.72
RAB28-203ENST00000338176 AKAP11Q9UKA4 1901 aa25.77■■□□□ 1.72
RAB28-203ENST00000338176 TRPA1O75762 1119 aa25.77■■□□□ 1.72
RAB28-203ENST00000338176 TCP10Q12799 353 aa25.77■■□□□ 1.72
RAB28-203ENST00000338176 USP40Q9NVE5 1235 aa25.77■■□□□ 1.72
RAB28-203ENST00000338176 CASP8AP2Q9UKL3 1982 aa25.76■■□□□ 1.71
RAB28-203ENST00000338176 MECOMQ03112 1051 aa25.76■■□□□ 1.71
RAB28-203ENST00000338176 TTC39AQ5SRH9 613 aa25.76■■□□□ 1.71
RAB28-203ENST00000338176 SLC10A4Q96EP9 437 aa25.76■■□□□ 1.71
RAB28-203ENST00000338176 APBB1O00213 710 aa25.75■■□□□ 1.71
RAB28-203ENST00000338176 IREB2P48200 963 aaKnown RBP25.75■■□□□ 1.71
RAB28-203ENST00000338176 PDE3AQ14432 1141 aa25.75■■□□□ 1.71
RAB28-203ENST00000338176 SPRYD7Q5W111 196 aa25.75■■□□□ 1.71
RAB28-203ENST00000338176 ERICH6Q7L0X2 663 aa25.75■■□□□ 1.71
RAB28-203ENST00000338176 FAM83AQ86UY5 434 aa25.75■■□□□ 1.71
RAB28-203ENST00000338176 GAKO14976 1311 aa25.75■■□□□ 1.71
RAB28-203ENST00000338176 CA12O43570 354 aa25.74■■□□□ 1.71
RAB28-203ENST00000338176 UQCRFS1P1P0C7P4 283 aa25.74■■□□□ 1.71
RAB28-203ENST00000338176 FKBP1CQ5VVH2 108 aa25.74■■□□□ 1.71
RAB28-203ENST00000338176 ZFPM1Q8IX07 1006 aa25.74■■□□□ 1.71
RAB28-203ENST00000338176 FAM198AQ9UFP1 575 aa25.74■■□□□ 1.71
RAB28-203ENST00000338176 GJA5P36382 358 aa25.74■■□□□ 1.71
RAB28-203ENST00000338176 SPTY2D1Q68D10 685 aaPredicted RBP25.74■■□□□ 1.71
RAB28-203ENST00000338176 IL1RAPL2Q9NP60 686 aa25.74■■□□□ 1.71
RAB28-203ENST00000338176 RPAP2Q8IXW5 612 aaPredicted RBP25.73■■□□□ 1.71
RAB28-203ENST00000338176 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.73■■□□□ 1.71
RAB28-203ENST00000338176 WNK4Q96J92 1243 aa25.73■■□□□ 1.71
RAB28-203ENST00000338176 BCL11AQ9H165 835 aa25.73■■□□□ 1.71
RAB28-203ENST00000338176 MYO5AQ9Y4I1 1855 aaKnown RBP25.73■■□□□ 1.71
RAB28-203ENST00000338176 CCDC158Q5M9N0 1113 aa25.72■■□□□ 1.71
RAB28-203ENST00000338176 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.72■■□□□ 1.71
RAB28-203ENST00000338176 CNKSR2Q8WXI2 1034 aa25.72■■□□□ 1.71
RAB28-203ENST00000338176 ELP3Q9H9T3 547 aa25.72■■□□□ 1.71
RAB28-203ENST00000338176 AK9Q5TCS8 1911 aa25.72■■□□□ 1.71
RAB28-203ENST00000338176 BTDP43251 543 aa25.72■■□□□ 1.71
RAB28-203ENST00000338176 NSUN4Q96CB9 384 aaKnown RBP25.72■■□□□ 1.71
RAB28-203ENST00000338176 RAI14Q9P0K7 980 aa25.72■■□□□ 1.71
RAB28-203ENST00000338176 MROH7-TTC4A0A0A0MT08 1334 aa25.71■■□□□ 1.71
RAB28-203ENST00000338176 MIGA2Q7L4E1 593 aa25.71■■□□□ 1.71
RAB28-203ENST00000338176 AACSQ86V21 672 aa25.71■■□□□ 1.71
RAB28-203ENST00000338176 ANKRD13AQ8IZ07 590 aa25.71■■□□□ 1.71
RAB28-203ENST00000338176 FAM151AQ8WW52 585 aa25.71■■□□□ 1.71
RAB28-203ENST00000338176 NDUFB9Q9Y6M9 179 aa25.71■■□□□ 1.71
RAB28-203ENST00000338176 CYP2E1P05181 493 aaPredicted RBP25.7■■□□□ 1.7
RAB28-203ENST00000338176 ZAP70P43403 619 aa25.7■■□□□ 1.7
RAB28-203ENST00000338176 RHPN1Q8TCX5 695 aa25.7■■□□□ 1.7
RAB28-203ENST00000338176 FAM163AQ96GL9 167 aaPredicted RBP25.7■■□□□ 1.7
RAB28-203ENST00000338176 VGLL4Q14135 290 aa25.69■■□□□ 1.7
RAB28-203ENST00000338176 ERC1Q8IUD2 1116 aa25.69■■□□□ 1.7
RAB28-203ENST00000338176 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.69■■□□□ 1.72e-7■□□□□ 9.2
RAB28-203ENST00000338176 SAGE1Q9NXZ1 904 aa25.69■■□□□ 1.7
RAB28-203ENST00000338176 LRP2BPQ9P2M1 347 aa25.69■■□□□ 1.7
RAB28-203ENST00000338176 CAPN15O75808 1086 aa25.69■■□□□ 1.7
RAB28-203ENST00000338176 TM4SF4P48230 202 aa25.69■■□□□ 1.7
RAB28-203ENST00000338176 RGS3P49796 1198 aa25.69■■□□□ 1.7
RAB28-203ENST00000338176 DDX4Q9NQI0 724 aaKnown RBP25.69■■□□□ 1.7
RAB28-203ENST00000338176 MAP3K9P80192 1104 aa25.68■■□□□ 1.7
RAB28-203ENST00000338176 PIH1D3Q9NQM4 214 aaKnown RBP25.68■■□□□ 1.7
RAB28-203ENST00000338176 RPAP1Q9BWH6 1393 aaPredicted RBP25.68■■□□□ 1.7
RAB28-203ENST00000338176 HMMRO75330 724 aa25.67■■□□□ 1.7
RAB28-203ENST00000338176 WDHD1O75717 1129 aaPredicted RBP25.67■■□□□ 1.7
RAB28-203ENST00000338176 SLURP2P0DP57 97 aa25.67■■□□□ 1.7
RAB28-203ENST00000338176 RHBDL3P58872 404 aa25.67■■□□□ 1.7
RAB28-203ENST00000338176 SLF2Q8IX21 1173 aa25.67■■□□□ 1.7
RAB28-203ENST00000338176 REM2Q8IYK8 340 aaPredicted RBP25.67■■□□□ 1.7
RAB28-203ENST00000338176 ZKSCAN4Q969J2 545 aaPredicted RBP25.67■■□□□ 1.7
RAB28-203ENST00000338176 OPTNQ96CV9 577 aa25.67■■□□□ 1.7
RAB28-203ENST00000338176 RFX7Q2KHR2 1363 aa25.67■■□□□ 1.7
RAB28-203ENST00000338176 GPR75-ASB3A0A0A6YYF3 556 aa25.67■■□□□ 1.7
RAB28-203ENST00000338176 TBC1D8O95759 1140 aa25.67■■□□□ 1.7
RAB28-203ENST00000338176 ZNF512BQ96KM6 892 aaPredicted RBP25.67■■□□□ 1.7
RAB28-203ENST00000338176 WRNIP1Q96S55 665 aa25.67■■□□□ 1.7
RAB28-203ENST00000338176 UNCXA6NJT0 531 aa25.66■■□□□ 1.7
RAB28-203ENST00000338176 PICALMQ13492 652 aa25.66■■□□□ 1.7
RAB28-203ENST00000338176 HSP90AB4PQ58FF6 505 aa25.66■■□□□ 1.7
RAB28-203ENST00000338176 SH3BP5LQ7L8J4 393 aa25.66■■□□□ 1.7
RAB28-203ENST00000338176 IDI2Q9BXS1 227 aa25.66■■□□□ 1.7
RAB28-203ENST00000338176 CHMP4BQ9H444 224 aaKnown RBP25.66■■□□□ 1.7
RAB28-203ENST00000338176 ZBTB48P10074 688 aaPredicted RBP25.65■■□□□ 1.7
RAB28-203ENST00000338176 R3HDMLQ9H3Y0 253 aa25.65■■□□□ 1.7
RAB28-203ENST00000338176 SREBF2Q12772 1141 aa25.64■■□□□ 1.7
RAB28-203ENST00000338176 SNCAIPQ9Y6H5 919 aa25.64■■□□□ 1.7
RAB28-203ENST00000338176 INPP5BP32019 993 aa25.64■■□□□ 1.69
RAB28-203ENST00000338176 GSTO1P78417 241 aa25.64■■□□□ 1.69
RAB28-203ENST00000338176 ADGRA1Q86SQ6 560 aa25.64■■□□□ 1.69
RAB28-203ENST00000338176 KIF1BPQ96EK5 621 aa25.64■■□□□ 1.69
RAB28-203ENST00000338176 CSADQ9Y600 493 aa25.64■■□□□ 1.69
RAB28-203ENST00000338176 DDTLA6NHG4 134 aaPredicted RBP25.63■■□□□ 1.69
RAB28-203ENST00000338176 MANSC4A6NHS7 340 aaPredicted RBP25.63■■□□□ 1.69
RAB28-203ENST00000338176 IGF2BP3O00425 579 aaKnown RBP eCLIP25.63■■□□□ 1.69
RAB28-203ENST00000338176 RRP1P56182 461 aaKnown RBP25.63■■□□□ 1.69
RAB28-203ENST00000338176 ANTXR1Q9H6X2 564 aa25.63■■□□□ 1.69
RAB28-203ENST00000338176 LAMB1P07942 1786 aa25.62■■□□□ 1.69
RAB28-203ENST00000338176 MAST2Q6P0Q8 1798 aa25.62■■□□□ 1.69
RAB28-203ENST00000338176 LDHCP07864 332 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms