RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ARID5AQ03989 594 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 PPP2R5BQ15173 497 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 KRBA2Q6ZNG9 492 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 IFT81Q8WYA0 676 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 LIN9Q5TKA1 542 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 EXOC7Q9UPT5 735 aa14.65□□□□□ -0.06
HLCS-201ENST00000336648 DISP3Q9P2K9 1392 aa14.64□□□□□ -0.07
HLCS-201ENST00000336648 HAUS3Q68CZ6 603 aa14.64□□□□□ -0.07
HLCS-201ENST00000336648 BABAM1Q9NWV8 329 aa14.64□□□□□ -0.07
HLCS-201ENST00000336648 SH3BGRP55822 239 aaPredicted RBP14.64□□□□□ -0.07
HLCS-201ENST00000336648 CYP26C1Q6V0L0 522 aa14.64□□□□□ -0.07
HLCS-201ENST00000336648 CAPZA3Q96KX2 299 aa14.64□□□□□ -0.07
HLCS-201ENST00000336648 NAPGQ99747 312 aaPredicted RBP14.64□□□□□ -0.07
HLCS-201ENST00000336648 AOX1Q06278 1338 aa14.64□□□□□ -0.07
HLCS-201ENST00000336648 ZFYVE9O95405 1425 aa14.64□□□□□ -0.07
HLCS-201ENST00000336648 PARP1P09874 1014 aaKnown RBP14.64□□□□□ -0.07
HLCS-201ENST00000336648 PRIM1P49642 420 aaKnown RBP14.64□□□□□ -0.07
HLCS-201ENST00000336648 NUF2Q9BZD4 464 aa14.64□□□□□ -0.07
HLCS-201ENST00000336648 TSKSQ9UJT2 592 aa14.64□□□□□ -0.07
HLCS-201ENST00000336648 SYT10Q6XYQ8 523 aa14.64□□□□□ -0.07
HLCS-201ENST00000336648 WHAMMQ8TF30 809 aa14.64□□□□□ -0.07
HLCS-201ENST00000336648 LZTFL1Q9NQ48 299 aa14.64□□□□□ -0.07
HLCS-201ENST00000336648 MCM9Q9NXL9 1143 aa14.64□□□□□ -0.07
HLCS-201ENST00000336648 UBL4BQ8N7F7 174 aa14.64□□□□□ -0.07
HLCS-201ENST00000336648 PCDHB15Q9Y5E8 787 aa14.64□□□□□ -0.07
HLCS-201ENST00000336648 MSH6P52701 1360 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 CALUO43852 315 aaPredicted RBP14.63□□□□□ -0.07
HLCS-201ENST00000336648 SMTNP53814 917 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 SATB1Q01826 763 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 CCT6BQ92526 530 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 DDX27Q96GQ7 796 aaKnown RBP14.63□□□□□ -0.07
HLCS-201ENST00000336648 DENND2AQ9ULE3 1009 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 DEXIO95424 95 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 ATP6V1AP38606 617 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 RUFY4Q6ZNE9 571 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 PPP1R12CQ9BZL4 782 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 FAM204AQ9H8W3 233 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 ERCC3P19447 782 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 MCM7P33993 719 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 ZC3H12CQ9C0D7 883 aaKnown RBP14.63□□□□□ -0.07
HLCS-201ENST00000336648 IMPACTQ9P2X3 320 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 NIP7Q9Y221 180 aaKnown RBP eCLIP14.63□□□□□ -0.07
HLCS-201ENST00000336648 TLDC2A0PJX2 215 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 STK10O94804 968 aaKnown RBP14.63□□□□□ -0.07
HLCS-201ENST00000336648 SH2D4BQ5SQS7 431 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 ARHGAP24Q8N264 748 aa14.63□□□□□ -0.07
HLCS-201ENST00000336648 TSPYL2Q9H2G4 693 aaPredicted RBP14.63□□□□□ -0.07
HLCS-201ENST00000336648 PPP2R3AQ06190 1150 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 KARSQ15046 597 aaKnown RBP14.62□□□□□ -0.07
HLCS-201ENST00000336648 CEP85Q6P2H3 762 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 TTC16Q8NEE8 873 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 NOX5Q96PH1 765 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 FLT4P35916 1363 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 LDHBP07195 334 aaKnown RBP14.62□□□□□ -0.07
HLCS-201ENST00000336648 TNFAIP3P21580 790 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 AFAP1L1Q8TED9 768 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 NOC4LQ9BVI4 516 aaKnown RBP14.62□□□□□ -0.07
HLCS-201ENST00000336648 HSP90AA4PQ58FG1 418 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 IFT20Q8IY31 132 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 UBLCP1Q8WVY7 318 aaPredicted RBP14.62□□□□□ -0.07
HLCS-201ENST00000336648 FNBP1Q96RU3 617 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 TAOK1Q7L7X3 1001 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 LEO1Q8WVC0 666 aaPredicted RBP14.62□□□□□ -0.07
HLCS-201ENST00000336648 KCNG1Q9UIX4 513 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 APOBRQ0VD83 1088 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 PICALMQ13492 652 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 SKAP1Q86WV1 359 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 EPSTI1Q96J88 318 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 HAUS2Q9NVX0 235 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 TNRQ92752 1358 aa14.62□□□□□ -0.07
HLCS-201ENST00000336648 SH3BP5O60239 455 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 PHLDB2Q86SQ0 1253 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 MLKLQ8NB16 471 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 TCEANC2Q96MN5 208 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 UTP11Q9Y3A2 253 aaKnown RBP14.61□□□□□ -0.07
HLCS-201ENST00000336648 RHOXF2BP0C7M4 288 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 CNGA1P29973 690 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 VPS52Q8N1B4 723 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 RHOXF2Q9BQY4 288 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 CHMLP26374 656 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 CCDC25Q86WR0 208 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 TRAF5O00463 557 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 STX17P56962 302 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 EVCP57679 992 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 TBC1D8BQ0IIM8 1120 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 ZBTB17Q13105 803 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 C8orf74Q6P047 294 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 MAIP1Q8WWC4 291 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 NUCKS1Q9H1E3 243 aaKnown RBP14.61□□□□□ -0.07
HLCS-201ENST00000336648 SPOPO43791 374 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 MGEA5O60502 916 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 PPFIA3O75145 1194 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 LGSNQ5TDP6 509 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 MAGEB6Q8N7X4 407 aa14.61□□□□□ -0.07
HLCS-201ENST00000336648 RAPGEF1Q13905 1077 aa14.6□□□□□ -0.07
HLCS-201ENST00000336648 CUTAO60888 179 aa14.6□□□□□ -0.07
HLCS-201ENST00000336648 MTMR3Q13615 1198 aa14.6□□□□□ -0.07
HLCS-201ENST00000336648 PRR16Q569H4 304 aa14.6□□□□□ -0.07
HLCS-201ENST00000336648 FCHSD1Q86WN1 690 aa14.6□□□□□ -0.07
HLCS-201ENST00000336648 DZIP3Q86Y13 1208 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms