RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 MYRIPQ8NFW9 859 aa20.59■□□□□ 0.89
LRCH3-201ENST00000334859 PHKBQ93100 1093 aa20.59■□□□□ 0.89
LRCH3-201ENST00000334859 ARMT1Q9H993 441 aa20.59■□□□□ 0.89
LRCH3-201ENST00000334859 EPB41L4AQ9HCS5 686 aaPredicted RBP20.59■□□□□ 0.89
LRCH3-201ENST00000334859 ROBO1Q9Y6N7 1651 aa20.59■□□□□ 0.89
LRCH3-201ENST00000334859 ZBTB43O43298 467 aa20.58■□□□□ 0.89
LRCH3-201ENST00000334859 GNL2Q13823 731 aaKnown RBP20.58■□□□□ 0.89
LRCH3-201ENST00000334859 ZRSR1Q15695 479 aaKnown RBP20.58■□□□□ 0.89
LRCH3-201ENST00000334859 TMEM67Q5HYA8 995 aa20.58■□□□□ 0.89
LRCH3-201ENST00000334859 TMEM87BQ96K49 555 aa20.58■□□□□ 0.89
LRCH3-201ENST00000334859 INCENPQ9NQS7 918 aa20.58■□□□□ 0.89
LRCH3-201ENST00000334859 CTDSPL2Q05D32 466 aa20.58■□□□□ 0.88
LRCH3-201ENST00000334859 DDB1Q16531 1140 aa20.58■□□□□ 0.88
LRCH3-201ENST00000334859 CCDC152Q4G0S7 254 aa20.58■□□□□ 0.88
LRCH3-201ENST00000334859 ANO1Q5XXA6 986 aa20.58■□□□□ 0.88
LRCH3-201ENST00000334859 MYL10Q9BUA6 226 aa20.58■□□□□ 0.88
LRCH3-201ENST00000334859 GOLGA8AA7E2F4 631 aa20.57■□□□□ 0.88
LRCH3-201ENST00000334859 CDC27P30260 824 aa20.57■□□□□ 0.88
LRCH3-201ENST00000334859 IFNL3Q8IZI9 196 aa20.57■□□□□ 0.88
LRCH3-201ENST00000334859 PATL2C9JE40 543 aaKnown RBP20.57■□□□□ 0.88
LRCH3-201ENST00000334859 ADAMTS2O95450 1211 aa20.57■□□□□ 0.88
LRCH3-201ENST00000334859 SARM1Q6SZW1 724 aa20.57■□□□□ 0.88
LRCH3-201ENST00000334859 VPS37DQ86XT2 251 aa20.57■□□□□ 0.88
LRCH3-201ENST00000334859 DHX40Q8IX18 779 aaKnown RBP20.57■□□□□ 0.88
LRCH3-201ENST00000334859 AOPEPQ8N6M6 819 aa20.57■□□□□ 0.88
LRCH3-201ENST00000334859 NAT10Q9H0A0 1025 aaKnown RBP20.57■□□□□ 0.88
LRCH3-201ENST00000334859 LY9Q9HBG7 655 aa20.57■□□□□ 0.88
LRCH3-201ENST00000334859 DOCK2Q92608 1830 aa20.56■□□□□ 0.88
LRCH3-201ENST00000334859 IGHMBP2P38935 993 aaKnown RBP20.56■□□□□ 0.88
LRCH3-201ENST00000334859 ALX1Q15699 326 aa20.56■□□□□ 0.88
LRCH3-201ENST00000334859 NIP7Q9Y221 180 aaKnown RBP eCLIP20.56■□□□□ 0.88
LRCH3-201ENST00000334859 CHD4Q14839 1912 aa20.56■□□□□ 0.88
LRCH3-201ENST00000334859 LOC102724428A0A0B4J2F2 783 aa20.56■□□□□ 0.88
LRCH3-201ENST00000334859 CDC25BP30305 580 aa20.56■□□□□ 0.88
LRCH3-201ENST00000334859 SIK1P57059 783 aa20.56■□□□□ 0.88
LRCH3-201ENST00000334859 CHAF1AQ13111 956 aaPredicted RBP20.56■□□□□ 0.88
LRCH3-201ENST00000334859 KRT40Q6A162 431 aa20.56■□□□□ 0.88
LRCH3-201ENST00000334859 IGDCC4Q8TDY8 1250 aa20.56■□□□□ 0.88
LRCH3-201ENST00000334859 PHLPP1O60346 1717 aa20.55■□□□□ 0.88
LRCH3-201ENST00000334859 IFIT3O14879 490 aaKnown RBP20.55■□□□□ 0.88
LRCH3-201ENST00000334859 CAMTA2O94983 1202 aa20.55■□□□□ 0.88
LRCH3-201ENST00000334859 TDO2P48775 406 aa20.55■□□□□ 0.88
LRCH3-201ENST00000334859 BCAMP50895 628 aa20.55■□□□□ 0.88
LRCH3-201ENST00000334859 PARP10Q53GL7 1025 aa20.55■□□□□ 0.88
LRCH3-201ENST00000334859 PDCL3Q9H2J4 239 aa20.55■□□□□ 0.88
LRCH3-201ENST00000334859 TOMM22Q9NS69 142 aa20.55■□□□□ 0.88
LRCH3-201ENST00000334859 COL22A1Q8NFW1 1626 aaPredicted RBP20.55■□□□□ 0.88
LRCH3-201ENST00000334859 MARCKSP29966 332 aaPredicted RBP20.55■□□□□ 0.88
LRCH3-201ENST00000334859 IARSP41252 1262 aaKnown RBP20.55■□□□□ 0.88
LRCH3-201ENST00000334859 TRIM29Q14134 588 aa20.55■□□□□ 0.88
LRCH3-201ENST00000334859 CCDC144BQ3MJ40 725 aa20.55■□□□□ 0.88
LRCH3-201ENST00000334859 RRP12Q5JTH9 1297 aaKnown RBP20.55■□□□□ 0.88
LRCH3-201ENST00000334859 CDCA7Q9BWT1 371 aaPredicted RBP20.55■□□□□ 0.88
LRCH3-201ENST00000334859 SLC12A7Q9Y666 1083 aa20.55■□□□□ 0.88
LRCH3-201ENST00000334859 ECM29Q5VYK3 1845 aa20.54■□□□□ 0.88
LRCH3-201ENST00000334859 CCDC69A6NI79 296 aa20.54■□□□□ 0.88
LRCH3-201ENST00000334859 SGMS1Q86VZ5 419 aa20.54■□□□□ 0.88
LRCH3-201ENST00000334859 MRFAP1L1Q96HT8 127 aa20.54■□□□□ 0.88
LRCH3-201ENST00000334859 CNNM2Q9H8M5 875 aa20.54■□□□□ 0.88
LRCH3-201ENST00000334859 KIAA1468Q9P260 1216 aa20.54■□□□□ 0.88
LRCH3-201ENST00000334859 MROH7-TTC4A0A0A0MT08 1334 aa20.54■□□□□ 0.88
LRCH3-201ENST00000334859 PRKAB2O43741 272 aa20.53■□□□□ 0.88
LRCH3-201ENST00000334859 PFKFB1P16118 471 aa20.53■□□□□ 0.88
LRCH3-201ENST00000334859 ITPK1Q13572 414 aa20.53■□□□□ 0.88
LRCH3-201ENST00000334859 LCORLQ8N3X6 602 aa20.53■□□□□ 0.88
LRCH3-201ENST00000334859 NACAP1Q9BZK3 213 aa20.53■□□□□ 0.88
LRCH3-201ENST00000334859 ZSWIM5Q9P217 1185 aa20.53■□□□□ 0.88
LRCH3-201ENST00000334859 GSG1L2A8MUP6 293 aa20.53■□□□□ 0.88
LRCH3-201ENST00000334859 RANBP6O60518 1105 aaKnown RBP20.53■□□□□ 0.88
LRCH3-201ENST00000334859 DPCR1Q3MIW9 517 aa20.53■□□□□ 0.88
LRCH3-201ENST00000334859 AKNAD1Q5T1N1 836 aa20.53■□□□□ 0.88
LRCH3-201ENST00000334859 MFSD6Q6ZSS7 791 aa20.53■□□□□ 0.88
LRCH3-201ENST00000334859 STK11IPQ8N1F8 1099 aa20.53■□□□□ 0.88
LRCH3-201ENST00000334859 MIGA1Q8NAN2 632 aa20.53■□□□□ 0.88
LRCH3-201ENST00000334859 CACTINQ8WUQ7 758 aaKnown RBP20.53■□□□□ 0.88
LRCH3-201ENST00000334859 LRP2BPQ9P2M1 347 aa20.53■□□□□ 0.88
LRCH3-201ENST00000334859 SLC4A4Q9Y6R1 1079 aa20.53■□□□□ 0.88
LRCH3-201ENST00000334859 SPATA31A1Q5TZJ5 1347 aa20.53■□□□□ 0.88
LRCH3-201ENST00000334859 ZNF202O95125 648 aa20.52■□□□□ 0.88
LRCH3-201ENST00000334859 NTSR2O95665 410 aa20.52■□□□□ 0.88
LRCH3-201ENST00000334859 SLC3A2P08195 630 aaKnown RBP20.52■□□□□ 0.88
LRCH3-201ENST00000334859 SLC39A14Q15043 492 aa20.52■□□□□ 0.88
LRCH3-201ENST00000334859 AXDND1Q5T1B0 1012 aaPredicted RBP20.52■□□□□ 0.88
LRCH3-201ENST00000334859 SLC26A6Q9BXS9 759 aa20.52■□□□□ 0.88
LRCH3-201ENST00000334859 BIN1O00499 593 aa20.52■□□□□ 0.88
LRCH3-201ENST00000334859 CMA1P23946 247 aa20.52■□□□□ 0.88
LRCH3-201ENST00000334859 LIFRP42702 1097 aa20.52■□□□□ 0.88
LRCH3-201ENST00000334859 NTRK3Q16288 839 aa20.52■□□□□ 0.88
LRCH3-201ENST00000334859 KRT23Q9C075 422 aa20.52■□□□□ 0.88
LRCH3-201ENST00000334859 IQSEC3Q9UPP2 1182 aaPredicted RBP20.52■□□□□ 0.88
LRCH3-201ENST00000334859 AHDC1Q5TGY3 1603 aaPredicted RBP20.51■□□□□ 0.87
LRCH3-201ENST00000334859 TIAM2Q8IVF5 1701 aa20.51■□□□□ 0.87
LRCH3-201ENST00000334859 WDHD1O75717 1129 aaPredicted RBP20.51■□□□□ 0.87
LRCH3-201ENST00000334859 CHRNDQ07001 517 aa20.51■□□□□ 0.87
LRCH3-201ENST00000334859 RGS22Q8NE09 1264 aa20.51■□□□□ 0.87
LRCH3-201ENST00000334859 MYH14Q7Z406 1995 aaKnown RBP20.51■□□□□ 0.87
LRCH3-201ENST00000334859 UBE2Q2LH0YL09 131 aa20.51■□□□□ 0.87
LRCH3-201ENST00000334859 GNAT2P19087 354 aa20.51■□□□□ 0.87
LRCH3-201ENST00000334859 MARCH10Q8NA82 808 aaPredicted RBP20.51■□□□□ 0.87
LRCH3-201ENST00000334859 TSC1Q92574 1164 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms