RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 GPRC5DQ9NZD1 345 aa19.88■□□□□ 0.77
SHOX-201ENST00000334060 MAGEB6P1A0A0J9YX57 407 aa19.87■□□□□ 0.77
SHOX-201ENST00000334060 CDC42EP5Q6NZY7 148 aa19.87■□□□□ 0.77
SHOX-201ENST00000334060 ZFPM1Q8IX07 1006 aa19.87■□□□□ 0.77
SHOX-201ENST00000334060 TEKT1Q969V4 418 aa19.87■□□□□ 0.77
SHOX-201ENST00000334060 BACH2Q9BYV9 841 aa19.87■□□□□ 0.77
SHOX-201ENST00000334060 GPR75-ASB3A0A0A6YYF3 556 aa19.86■□□□□ 0.77
SHOX-201ENST00000334060 POTEIP0CG38 1075 aa19.86■□□□□ 0.77
SHOX-201ENST00000334060 POTEJP0CG39 1038 aa19.86■□□□□ 0.77
SHOX-201ENST00000334060 CDAN1Q8IWY9 1227 aa19.86■□□□□ 0.77
SHOX-201ENST00000334060 LSG1Q9H089 658 aaKnown RBP19.86■□□□□ 0.77
SHOX-201ENST00000334060 MYOZ2Q9NPC6 264 aa19.86■□□□□ 0.77
SHOX-201ENST00000334060 CCDC171Q6TFL3 1326 aa19.86■□□□□ 0.77
SHOX-201ENST00000334060 CYP2D7A0A087X1C5 515 aa19.86■□□□□ 0.77
SHOX-201ENST00000334060 GLTPD2A6NH11 291 aa19.86■□□□□ 0.77
SHOX-201ENST00000334060 ZFYP08048 801 aaPredicted RBP19.86■□□□□ 0.77
SHOX-201ENST00000334060 AIDAQ96BJ3 306 aa19.86■□□□□ 0.77
SHOX-201ENST00000334060 CDK5RAP2Q96SN8 1893 aa19.86■□□□□ 0.77
SHOX-201ENST00000334060 SPDYE2BA6NHP3 402 aa19.85■□□□□ 0.77
SHOX-201ENST00000334060 WNT10BO00744 389 aa19.85■□□□□ 0.77
SHOX-201ENST00000334060 SPDYE6P0CI01 402 aa19.85■□□□□ 0.77
SHOX-201ENST00000334060 ZNF280AP59817 542 aaPredicted RBP19.85■□□□□ 0.77
SHOX-201ENST00000334060 ZDHHC15Q96MV8 337 aa19.85■□□□□ 0.77
SHOX-201ENST00000334060 ANO2Q9NQ90 1003 aa19.85■□□□□ 0.77
SHOX-201ENST00000334060 HELLSQ9NRZ9 838 aa19.85■□□□□ 0.77
SHOX-201ENST00000334060 SUGT1Q9Y2Z0 365 aa19.85■□□□□ 0.77
SHOX-201ENST00000334060 MYO3BQ8WXR4 1341 aa19.85■□□□□ 0.77
SHOX-201ENST00000334060 ZSCAN25Q6NSZ9 544 aa19.84■□□□□ 0.77
SHOX-201ENST00000334060 NKX2-3Q8TAU0 364 aa19.84■□□□□ 0.77
SHOX-201ENST00000334060 ZBED3Q96IU2 234 aaPredicted RBP19.84■□□□□ 0.77
SHOX-201ENST00000334060 SERPINA10Q9UK55 444 aa19.84■□□□□ 0.77
SHOX-201ENST00000334060 GSG1L2A8MUP6 293 aa19.84■□□□□ 0.77
SHOX-201ENST00000334060 WDHD1O75717 1129 aaPredicted RBP19.84■□□□□ 0.77
SHOX-201ENST00000334060 HSPD1P10809 573 aaKnown RBP19.84■□□□□ 0.77
SHOX-201ENST00000334060 PICALMQ13492 652 aa19.84■□□□□ 0.77
SHOX-201ENST00000334060 HHIPL2Q6UWX4 724 aa19.84■□□□□ 0.77
SHOX-201ENST00000334060 MAPKAPK5Q8IW41 473 aa19.84■□□□□ 0.77
SHOX-201ENST00000334060 TGFBRAP1Q8WUH2 860 aa19.84■□□□□ 0.77
SHOX-201ENST00000334060 FAM163AQ96GL9 167 aaPredicted RBP19.84■□□□□ 0.77
SHOX-201ENST00000334060 CYP2D6P10635 497 aa19.83■□□□□ 0.77
SHOX-201ENST00000334060 STK11IPQ8N1F8 1099 aa19.83■□□□□ 0.77
SHOX-201ENST00000334060 DPF2Q92785 391 aa19.83■□□□□ 0.77
SHOX-201ENST00000334060 USP40Q9NVE5 1235 aa19.83■□□□□ 0.77
SHOX-201ENST00000334060 TACC3Q9Y6A5 838 aa19.83■□□□□ 0.77
SHOX-201ENST00000334060 SLC4A4Q9Y6R1 1079 aa19.83■□□□□ 0.77
SHOX-201ENST00000334060 BAZ2AQ9UIF9 1905 aaKnown RBP19.83■□□□□ 0.76
SHOX-201ENST00000334060 KIF4BQ2VIQ3 1234 aa19.83■□□□□ 0.76
SHOX-201ENST00000334060 OGFOD1Q8N543 542 aa19.83■□□□□ 0.76
SHOX-201ENST00000334060 NMRK2Q9NPI5 230 aa19.83■□□□□ 0.76
SHOX-201ENST00000334060 RPS12P25398 132 aaKnown RBP19.82■□□□□ 0.76
SHOX-201ENST00000334060 TCP10Q12799 353 aa19.82■□□□□ 0.76
SHOX-201ENST00000334060 DLGAP5Q15398 846 aa19.82■□□□□ 0.76
SHOX-201ENST00000334060 INCENPQ9NQS7 918 aa19.82■□□□□ 0.76
SHOX-201ENST00000334060 SAP30BPQ9UHR5 308 aaKnown RBP19.82■□□□□ 0.76
SHOX-201ENST00000334060 PALD1Q9ULE6 856 aa19.82■□□□□ 0.76
SHOX-201ENST00000334060 HIP1O00291 1037 aa19.81■□□□□ 0.76
SHOX-201ENST00000334060 GSTO1P78417 241 aa19.81■□□□□ 0.76
SHOX-201ENST00000334060 FAM198AQ9UFP1 575 aa19.81■□□□□ 0.76
SHOX-201ENST00000334060 TCP10L2B9ZVM9 353 aa19.81■□□□□ 0.76
SHOX-201ENST00000334060 PPP4CP60510 307 aa19.81■□□□□ 0.76
SHOX-201ENST00000334060 PRAMEF18Q5VWM3 479 aa19.81■□□□□ 0.76
SHOX-201ENST00000334060 DPY19L2Q6NUT2 758 aa19.81■□□□□ 0.76
SHOX-201ENST00000334060 TEX11Q8IYF3 940 aa19.81■□□□□ 0.76
SHOX-201ENST00000334060 L3MBTL3Q96JM7 780 aaPredicted RBP19.81■□□□□ 0.76
SHOX-201ENST00000334060 MKRN1Q9UHC7 482 aaKnown RBP19.81■□□□□ 0.76
SHOX-201ENST00000334060 HAND2P61296 217 aa19.8■□□□□ 0.76
SHOX-201ENST00000334060 RRAGCQ9HB90 399 aa19.8■□□□□ 0.76
SHOX-201ENST00000334060 DCP1AQ9NPI6 582 aaPredicted RBP19.8■□□□□ 0.76
SHOX-201ENST00000334060 ZNF70Q9UC06 446 aaPredicted RBP19.8■□□□□ 0.76
SHOX-201ENST00000334060 ECM29Q5VYK3 1845 aa19.8■□□□□ 0.76
SHOX-201ENST00000334060 APPP05067 770 aa19.79■□□□□ 0.76
SHOX-201ENST00000334060 LDHCP07864 332 aa19.79■□□□□ 0.76
SHOX-201ENST00000334060 HDLBPQ00341 1268 aaKnown RBP19.79■□□□□ 0.76
SHOX-201ENST00000334060 SH3BP5LQ7L8J4 393 aa19.79■□□□□ 0.76
SHOX-201ENST00000334060 USP26Q9BXU7 913 aa19.79■□□□□ 0.76
SHOX-201ENST00000334060 NBPF3Q9H094 633 aa19.79■□□□□ 0.76
SHOX-201ENST00000334060 VEZTQ9HBM0 779 aa19.79■□□□□ 0.76
SHOX-201ENST00000334060 HDAC9Q9UKV0 1011 aa19.79■□□□□ 0.76
SHOX-201ENST00000334060 FLT1P17948 1338 aa19.79■□□□□ 0.76
SHOX-201ENST00000334060 FGAP02671 866 aa19.79■□□□□ 0.76
SHOX-201ENST00000334060 RAD50Q92878 1312 aa19.79■□□□□ 0.76
SHOX-201ENST00000334060 CNTNAP1P78357 1384 aa19.78■□□□□ 0.76
SHOX-201ENST00000334060 ANGEL2Q5VTE6 544 aaKnown RBP19.78■□□□□ 0.76
SHOX-201ENST00000334060 CASC1Q6TDU7 716 aa19.78■□□□□ 0.76
SHOX-201ENST00000334060 RASEFQ8IZ41 740 aa19.78■□□□□ 0.76
SHOX-201ENST00000334060 IFNL3Q8IZI9 196 aa19.78■□□□□ 0.76
SHOX-201ENST00000334060 RUFY2Q8WXA3 655 aa19.78■□□□□ 0.76
SHOX-201ENST00000334060 HACL1Q9UJ83 578 aa19.78■□□□□ 0.76
SHOX-201ENST00000334060 RBM8AQ9Y5S9 174 aaKnown RBP19.78■□□□□ 0.76
SHOX-201ENST00000334060 DDX60LQ5H9U9 1706 aaKnown RBP19.78■□□□□ 0.76
SHOX-201ENST00000334060 H7C1D1 291 aa19.77■□□□□ 0.76
SHOX-201ENST00000334060 FMR1Q06787 632 aaKnown RBP eCLIP19.77■□□□□ 0.76
SHOX-201ENST00000334060 LRRFIP1Q32MZ4 808 aaKnown RBP19.77■□□□□ 0.76
SHOX-201ENST00000334060 SPDYE2Q495Y8 402 aa19.77■□□□□ 0.76
SHOX-201ENST00000334060 MRIQ9BWK5 157 aa19.77■□□□□ 0.76
SHOX-201ENST00000334060 FZD1Q9UP38 647 aa19.77■□□□□ 0.76
SHOX-201ENST00000334060 WDR90Q96KV7 1748 aa19.77■□□□□ 0.76
SHOX-201ENST00000334060 DCAF8L1A6NGE4 600 aa19.77■□□□□ 0.75
SHOX-201ENST00000334060 DDTLA6NHG4 134 aaPredicted RBP19.77■□□□□ 0.75
SHOX-201ENST00000334060 FAM196BA6NMK8 535 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms