RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 BAG3O95817 575 aa18.64■□□□□ 0.57
PDGFB-201ENST00000331163 NPR1P16066 1061 aa18.64■□□□□ 0.57
PDGFB-201ENST00000331163 USP17L8P0C7I0 530 aa18.64■□□□□ 0.57
PDGFB-201ENST00000331163 IFNL3Q8IZI9 196 aa18.64■□□□□ 0.57
PDGFB-201ENST00000331163 TBC1D16Q8TBP0 767 aa18.64■□□□□ 0.57
PDGFB-201ENST00000331163 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.64■□□□□ 0.57
PDGFB-201ENST00000331163 ECM2O94769 699 aaPredicted RBP18.63■□□□□ 0.57
PDGFB-201ENST00000331163 ARHGAP27Q6ZUM4 889 aa18.63■□□□□ 0.57
PDGFB-201ENST00000331163 FBXO3Q9UK99 471 aa18.63■□□□□ 0.57
PDGFB-201ENST00000331163 GRIK5Q16478 980 aa18.63■□□□□ 0.57
PDGFB-201ENST00000331163 JDP2Q8WYK2 163 aa18.63■□□□□ 0.57
PDGFB-201ENST00000331163 DYNLL2Q96FJ2 89 aa18.63■□□□□ 0.57
PDGFB-201ENST00000331163 ZNF609O15014 1411 aa18.63■□□□□ 0.57
PDGFB-201ENST00000331163 SPTY2D1Q68D10 685 aaPredicted RBP18.62■□□□□ 0.57
PDGFB-201ENST00000331163 ZNF444Q8N0Y2 327 aaPredicted RBP18.62■□□□□ 0.57
PDGFB-201ENST00000331163 PRDM10Q9NQV6 1147 aa18.62■□□□□ 0.57
PDGFB-201ENST00000331163 ATP2B4P23634 1241 aa18.62■□□□□ 0.57
PDGFB-201ENST00000331163 ME3Q16798 604 aa18.62■□□□□ 0.57
PDGFB-201ENST00000331163 TTLL6Q8N841 843 aa18.62■□□□□ 0.57
PDGFB-201ENST00000331163 SLC44A5Q8NCS7 719 aa18.62■□□□□ 0.57
PDGFB-201ENST00000331163 TPCN1Q9ULQ1 816 aa18.62■□□□□ 0.57
PDGFB-201ENST00000331163 SLURP2P0DP57 97 aa18.61■□□□□ 0.57
PDGFB-201ENST00000331163 MCM5P33992 734 aa18.61■□□□□ 0.57
PDGFB-201ENST00000331163 CPLX2Q6PUV4 134 aaKnown RBP18.61■□□□□ 0.57
PDGFB-201ENST00000331163 RNF214Q8ND24 703 aa18.61■□□□□ 0.57
PDGFB-201ENST00000331163 SF3A1Q15459 793 aaKnown RBP18.61■□□□□ 0.57
PDGFB-201ENST00000331163 ADGRA1Q86SQ6 560 aa18.61■□□□□ 0.57
PDGFB-201ENST00000331163 KDM3BQ7LBC6 1761 aa18.61■□□□□ 0.57
PDGFB-201ENST00000331163 SRGNP10124 158 aa18.61■□□□□ 0.57
PDGFB-201ENST00000331163 BTDP43251 543 aa18.61■□□□□ 0.57
PDGFB-201ENST00000331163 OGFOD1Q8N543 542 aa18.61■□□□□ 0.57
PDGFB-201ENST00000331163 WDR66Q8TBY9 1149 aa18.61■□□□□ 0.57
PDGFB-201ENST00000331163 SLC12A7Q9Y666 1083 aa18.61■□□□□ 0.57
PDGFB-201ENST00000331163 TPM2P07951 284 aa18.6■□□□□ 0.57
PDGFB-201ENST00000331163 DNTTIP2Q5QJE6 756 aaKnown RBP18.6■□□□□ 0.57
PDGFB-201ENST00000331163 HOMER1Q86YM7 354 aa18.6■□□□□ 0.57
PDGFB-201ENST00000331163 CNKSR1Q969H4 720 aa18.6■□□□□ 0.57
PDGFB-201ENST00000331163 DHX32Q7L7V1 743 aaKnown RBP18.6■□□□□ 0.57
PDGFB-201ENST00000331163 PTMAP06454 111 aaKnown RBP18.59■□□□□ 0.57
PDGFB-201ENST00000331163 RPS6KB1P23443 525 aa18.59■□□□□ 0.57
PDGFB-201ENST00000331163 EVX2Q03828 476 aa18.59■□□□□ 0.57
PDGFB-201ENST00000331163 NECTIN1Q15223 517 aa18.59■□□□□ 0.57
PDGFB-201ENST00000331163 VGLL2Q8N8G2 317 aa18.59■□□□□ 0.57
PDGFB-201ENST00000331163 PHKBQ93100 1093 aa18.59■□□□□ 0.57
PDGFB-201ENST00000331163 EYA3Q99504 573 aa18.59■□□□□ 0.57
PDGFB-201ENST00000331163 LEMD3Q9Y2U8 911 aa18.59■□□□□ 0.57
PDGFB-201ENST00000331163 MYH14Q7Z406 1995 aaKnown RBP18.59■□□□□ 0.57
PDGFB-201ENST00000331163 LRRC37A3O60309 1634 aa18.59■□□□□ 0.57
PDGFB-201ENST00000331163 LDHCP07864 332 aa18.59■□□□□ 0.57
PDGFB-201ENST00000331163 SLC3A2P08195 630 aaKnown RBP18.59■□□□□ 0.57
PDGFB-201ENST00000331163 ZRSR1Q15695 479 aaKnown RBP18.59■□□□□ 0.57
PDGFB-201ENST00000331163 TM4SF1P30408 202 aa18.59■□□□□ 0.57
PDGFB-201ENST00000331163 MCM2P49736 904 aa18.59■□□□□ 0.57
PDGFB-201ENST00000331163 ZSCAN30Q86W11 494 aa18.59■□□□□ 0.57
PDGFB-201ENST00000331163 CAMKK2Q96RR4 588 aa18.59■□□□□ 0.57
PDGFB-201ENST00000331163 GOLGA8AA7E2F4 631 aa18.58■□□□□ 0.57
PDGFB-201ENST00000331163 TCP10L2B9ZVM9 353 aa18.58■□□□□ 0.57
PDGFB-201ENST00000331163 SKOR2Q2VWA4 1001 aaPredicted RBP18.58■□□□□ 0.57
PDGFB-201ENST00000331163 STOX1Q6ZVD7 989 aa18.58■□□□□ 0.57
PDGFB-201ENST00000331163 USP40Q9NVE5 1235 aa18.58■□□□□ 0.57
PDGFB-201ENST00000331163 ABCC6O95255 1503 aa18.58■□□□□ 0.56
PDGFB-201ENST00000331163 ZYXQ15942 572 aaKnown RBP18.58■□□□□ 0.56
PDGFB-201ENST00000331163 SH3RF3Q8TEJ3 882 aaPredicted RBP18.58■□□□□ 0.56
PDGFB-201ENST00000331163 STRBPQ96SI9 672 aaKnown RBP18.58■□□□□ 0.56
PDGFB-201ENST00000331163 GJB4Q9NTQ9 266 aa18.58■□□□□ 0.56
PDGFB-201ENST00000331163 GLI3P10071 1580 aa18.58■□□□□ 0.56
PDGFB-201ENST00000331163 SLC10A5Q5PT55 438 aa18.58■□□□□ 0.56
PDGFB-201ENST00000331163 NMT2O60551 498 aa18.57■□□□□ 0.56
PDGFB-201ENST00000331163 NUCB2P80303 420 aa18.57■□□□□ 0.56
PDGFB-201ENST00000331163 IQCA1Q86XH1 822 aa18.57■□□□□ 0.56
PDGFB-201ENST00000331163 SLC26A6Q9BXS9 759 aa18.57■□□□□ 0.56
PDGFB-201ENST00000331163 PDCL3Q9H2J4 239 aa18.57■□□□□ 0.56
PDGFB-201ENST00000331163 RBM27Q9P2N5 1060 aaKnown RBP18.57■□□□□ 0.56
PDGFB-201ENST00000331163 ABCA3Q99758 1704 aa18.57■□□□□ 0.56
PDGFB-201ENST00000331163 FGFR2P21802 821 aa18.57■□□□□ 0.56
PDGFB-201ENST00000331163 HMGB2P26583 209 aaKnown RBP18.57■□□□□ 0.56
PDGFB-201ENST00000331163 ADD1P35611 737 aaKnown RBP18.57■□□□□ 0.56
PDGFB-201ENST00000331163 ANAPC15P60006 121 aa18.57■□□□□ 0.56
PDGFB-201ENST00000331163 CCDC173Q0VFZ6 552 aa18.57■□□□□ 0.56
PDGFB-201ENST00000331163 ANKRD1Q15327 319 aa18.57■□□□□ 0.56
PDGFB-201ENST00000331163 PATL2C9JE40 543 aaKnown RBP18.57■□□□□ 0.56
PDGFB-201ENST00000331163 TRIM29Q14134 588 aa18.57■□□□□ 0.56
PDGFB-201ENST00000331163 TSPY3P0CV98 308 aa18.56■□□□□ 0.56
PDGFB-201ENST00000331163 TSPY8P0CW00 308 aa18.56■□□□□ 0.56
PDGFB-201ENST00000331163 METAP2P50579 478 aaKnown RBP eCLIP18.56■□□□□ 0.56
PDGFB-201ENST00000331163 WTAPQ15007 396 aa18.56■□□□□ 0.56
PDGFB-201ENST00000331163 TBC1D10CQ8IV04 446 aa18.56■□□□□ 0.56
PDGFB-201ENST00000331163 PCDHAC2Q9Y5I4 1007 aa18.56■□□□□ 0.56
PDGFB-201ENST00000331163 BAZ2BQ9UIF8 2168 aaKnown RBP18.56■□□□□ 0.56
PDGFB-201ENST00000331163 AKT1S1Q96B36 256 aa18.56■□□□□ 0.56
PDGFB-201ENST00000331163 UBE3CQ15386 1083 aa18.55■□□□□ 0.56
PDGFB-201ENST00000331163 TMOD2Q9NZR1 351 aa18.55■□□□□ 0.56
PDGFB-201ENST00000331163 ORC3Q9UBD5 711 aaPredicted RBP18.55■□□□□ 0.56
PDGFB-201ENST00000331163 ITGB4P16144 1822 aa18.55■□□□□ 0.56
PDGFB-201ENST00000331163 PPARAQ07869 468 aa18.55■□□□□ 0.56
PDGFB-201ENST00000331163 RAB3GAP1Q15042 981 aa18.55■□□□□ 0.56
PDGFB-201ENST00000331163 ATP6V0A2Q9Y487 856 aa18.55■□□□□ 0.56
PDGFB-201ENST00000331163 TOGARAM1Q9Y4F4 1720 aa18.54■□□□□ 0.56
PDGFB-201ENST00000331163 BICD2Q8TD16 824 aa18.54■□□□□ 0.56
PDGFB-201ENST00000331163 UQCRHLA0A096LP55 91 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms