RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 FANCIQ9NVI1 1328 aa8.11□□□□□ -1.11
SMG1-201ENST00000330588 LTBP1Q14766 1721 aa8.11□□□□□ -1.11
SMG1-201ENST00000330588 RTL9Q8NET4 1388 aa8.11□□□□□ -1.11
SMG1-201ENST00000330588 ADAMTSL1Q8N6G6 1762 aa8.11□□□□□ -1.11
SMG1-201ENST00000330588 CCER2I3L3R5 266 aa8.1□□□□□ -1.11
SMG1-201ENST00000330588 C4orf48Q5BLP8 95 aa8.1□□□□□ -1.11
SMG1-201ENST00000330588 MYSM1Q5VVJ2 828 aa8.1□□□□□ -1.11
SMG1-201ENST00000330588 SYNE4Q8N205 404 aa8.1□□□□□ -1.11
SMG1-201ENST00000330588 TSPYL6Q8N831 410 aa8.1□□□□□ -1.11
SMG1-201ENST00000330588 JDP2Q8WYK2 163 aa8.1□□□□□ -1.11
SMG1-201ENST00000330588 PHAXQ9H814 394 aaKnown RBP8.1□□□□□ -1.11
SMG1-201ENST00000330588 RRAGCQ9HB90 399 aa8.1□□□□□ -1.11
SMG1-201ENST00000330588 PDE8AO60658 829 aa8.1□□□□□ -1.11
SMG1-201ENST00000330588 GMPRP36959 345 aa8.1□□□□□ -1.11
SMG1-201ENST00000330588 WDR4P57081 412 aaKnown RBP8.1□□□□□ -1.11
SMG1-201ENST00000330588 NEXNQ0ZGT2 675 aa8.1□□□□□ -1.11
SMG1-201ENST00000330588 GPC2Q8N158 579 aa8.1□□□□□ -1.11
SMG1-201ENST00000330588 IRF7Q92985 503 aa8.1□□□□□ -1.11
SMG1-201ENST00000330588 TSR2Q969E8 191 aaKnown RBP8.1□□□□□ -1.11
SMG1-201ENST00000330588 ZNF428Q96B54 188 aa8.1□□□□□ -1.11
SMG1-201ENST00000330588 CWC25Q9NXE8 425 aaPredicted RBP8.1□□□□□ -1.11
SMG1-201ENST00000330588 MYH3P11055 1940 aa8.09□□□□□ -1.11
SMG1-201ENST00000330588 IRS4O14654 1257 aaPredicted RBP8.09□□□□□ -1.11
SMG1-201ENST00000330588 VAMP4O75379 141 aa8.09□□□□□ -1.11
SMG1-201ENST00000330588 HCLS1P14317 486 aaPredicted RBP8.09□□□□□ -1.11
SMG1-201ENST00000330588 KIAA2012Q0VF49 1180 aa8.09□□□□□ -1.11
SMG1-201ENST00000330588 ZNF277Q9NRM2 450 aaPredicted RBP8.09□□□□□ -1.11
SMG1-201ENST00000330588 LIMD1Q9UGP4 676 aa8.09□□□□□ -1.11
SMG1-201ENST00000330588 DUOX1Q9NRD9 1551 aa8.09□□□□□ -1.11
SMG1-201ENST00000330588 ZNF609O15014 1411 aa8.08□□□□□ -1.12
SMG1-201ENST00000330588 ELL2O00472 640 aaPredicted RBP8.08□□□□□ -1.12
SMG1-201ENST00000330588 LILRB3O75022 631 aa8.08□□□□□ -1.12
SMG1-201ENST00000330588 EIF6P56537 245 aaKnown RBP8.08□□□□□ -1.12
SMG1-201ENST00000330588 CCDC152Q4G0S7 254 aa8.08□□□□□ -1.12
SMG1-201ENST00000330588 PNMA8AQ86V59 439 aaPredicted RBP8.08□□□□□ -1.12
SMG1-201ENST00000330588 FAM89AQ96GI7 184 aa8.08□□□□□ -1.12
SMG1-201ENST00000330588 MYD88Q99836 296 aa8.08□□□□□ -1.12
SMG1-201ENST00000330588 PLA2G12BQ9BX93 195 aa8.08□□□□□ -1.12
SMG1-201ENST00000330588 PODXL2Q9NZ53 605 aa8.08□□□□□ -1.12
SMG1-201ENST00000330588 MAP3K2Q9Y2U5 619 aa8.08□□□□□ -1.12
SMG1-201ENST00000330588 COL4A5P29400 1685 aa8.08□□□□□ -1.12
SMG1-201ENST00000330588 PI4KAP2A4QPH2 592 aa8.07□□□□□ -1.12
SMG1-201ENST00000330588 ATP5J2-PTCD1G3V325 749 aa8.07□□□□□ -1.12
SMG1-201ENST00000330588 DDNO94850 711 aaPredicted RBP8.07□□□□□ -1.12
SMG1-201ENST00000330588 GRM5P41594 1212 aa8.07□□□□□ -1.12
SMG1-201ENST00000330588 FLIIQ13045 1269 aa8.07□□□□□ -1.12
SMG1-201ENST00000330588 NR5A1Q13285 461 aa8.07□□□□□ -1.12
SMG1-201ENST00000330588 SCARF1Q14162 830 aa8.07□□□□□ -1.12
SMG1-201ENST00000330588 QPCTQ16769 361 aa8.07□□□□□ -1.12
SMG1-201ENST00000330588 DPP8Q6V1X1 898 aaPredicted RBP8.07□□□□□ -1.12
SMG1-201ENST00000330588 LDHDQ86WU2 507 aa8.07□□□□□ -1.12
SMG1-201ENST00000330588 NIM1KQ8IY84 436 aa8.07□□□□□ -1.12
SMG1-201ENST00000330588 LARGE2Q8N3Y3 721 aa8.07□□□□□ -1.12
SMG1-201ENST00000330588 PI4KAP1Q8N8J0 262 aa8.07□□□□□ -1.12
SMG1-201ENST00000330588 LINS1Q8NG48 757 aa8.07□□□□□ -1.12
SMG1-201ENST00000330588 C1QTNF2Q9BXJ5 285 aa8.07□□□□□ -1.12
SMG1-201ENST00000330588 HACL1Q9UJ83 578 aa8.07□□□□□ -1.12
SMG1-201ENST00000330588 ZNF541Q9H0D2 1346 aa8.07□□□□□ -1.12
SMG1-201ENST00000330588 NEURL1BA8MQ27 555 aa8.06□□□□□ -1.12
SMG1-201ENST00000330588 E9PSI1 815 aa8.06□□□□□ -1.12
SMG1-201ENST00000330588 H7C1W4 665 aa8.06□□□□□ -1.12
SMG1-201ENST00000330588 IGKV5-2P06315 115 aa8.06□□□□□ -1.12
SMG1-201ENST00000330588 NR3C2P08235 984 aa8.06□□□□□ -1.12
SMG1-201ENST00000330588 CT47B1P0C2W7 299 aaPredicted RBP8.06□□□□□ -1.12
SMG1-201ENST00000330588 VEGFBP49765 207 aa8.06□□□□□ -1.12
SMG1-201ENST00000330588 RPS8P62241 208 aaKnown RBP8.06□□□□□ -1.12
SMG1-201ENST00000330588 SKIV2LQ15477 1246 aaKnown RBP8.06□□□□□ -1.12
SMG1-201ENST00000330588 OLFM4Q6UX06 510 aa8.06□□□□□ -1.12
SMG1-201ENST00000330588 FAM9BQ8IZU0 186 aa8.06□□□□□ -1.12
SMG1-201ENST00000330588 PROCA1Q8NCQ7 364 aaPredicted RBP8.06□□□□□ -1.12
SMG1-201ENST00000330588 DNAAF4Q8WXU2 420 aa8.06□□□□□ -1.12
SMG1-201ENST00000330588 PURBQ96QR8 312 aaKnown RBP8.06□□□□□ -1.12
SMG1-201ENST00000330588 TAF1DQ9H5J8 278 aaPredicted RBP8.06□□□□□ -1.12
SMG1-201ENST00000330588 POLR3EQ9NVU0 708 aa8.06□□□□□ -1.12
SMG1-201ENST00000330588 ZNRF3Q9ULT6 936 aa8.06□□□□□ -1.12
SMG1-201ENST00000330588 PPIP5K2O43314 1243 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 CLK2P49760 499 aaKnown RBP8.05□□□□□ -1.12
SMG1-201ENST00000330588 CTSWP56202 376 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 EXOSC9Q06265 439 aaKnown RBP8.05□□□□□ -1.12
SMG1-201ENST00000330588 SH3RF1Q7Z6J0 888 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 BPHLQ86WA6 291 aaPredicted RBP8.05□□□□□ -1.12
SMG1-201ENST00000330588 CDC5LQ99459 802 aaKnown RBP8.05□□□□□ -1.12
SMG1-201ENST00000330588 EYA3Q99504 573 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMG1-201ENST00000330588 PSME4Q14997 1843 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 ALDH1L1O75891 902 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 VSIG8P0DPA2 414 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 EPHX2P34913 555 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 GCKRQ14397 625 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 TNIP1Q15025 636 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 CSPP1Q1MSJ5 1256 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 USP50Q70EL3 339 aaPredicted RBP8.05□□□□□ -1.12
SMG1-201ENST00000330588 DNAJC5GQ8N7S2 189 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 JMYQ8N9B5 988 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 TTLL11Q8NHH1 800 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 CELF1Q92879 486 aaKnown RBP8.05□□□□□ -1.12
SMG1-201ENST00000330588 ITPKCQ96DU7 683 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 PCMTD1Q96MG8 357 aaPredicted RBP8.05□□□□□ -1.12
SMG1-201ENST00000330588 ZFAND3Q9H8U3 227 aa8.05□□□□□ -1.12
SMG1-201ENST00000330588 TAF1P21675 1872 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms