RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 C15orf52Q6ZUT6 534 aaKnown RBP19.06■□□□□ 0.64
CTHRC1-201ENST00000330295 ZNF804AQ7Z570 1209 aa19.06■□□□□ 0.64
CTHRC1-201ENST00000330295 PHAXQ9H814 394 aaKnown RBP19.06■□□□□ 0.64
CTHRC1-201ENST00000330295 KCNH4Q9UQ05 1017 aa19.06■□□□□ 0.64
CTHRC1-201ENST00000330295 SNAP23O00161 211 aa19.05■□□□□ 0.64
CTHRC1-201ENST00000330295 TNPO2O14787 897 aaKnown RBP19.05■□□□□ 0.64
CTHRC1-201ENST00000330295 CHRNDQ07001 517 aa19.05■□□□□ 0.64
CTHRC1-201ENST00000330295 MPHOSPH8Q99549 860 aa19.05■□□□□ 0.64
CTHRC1-201ENST00000330295 TAOK2Q9UL54 1235 aa19.05■□□□□ 0.64
CTHRC1-201ENST00000330295 TTF2Q9UNY4 1162 aaKnown RBP19.05■□□□□ 0.64
CTHRC1-201ENST00000330295 LMOD3Q0VAK6 560 aa19.04■□□□□ 0.64
CTHRC1-201ENST00000330295 METTL22Q9BUU2 404 aaPredicted RBP19.04■□□□□ 0.64
CTHRC1-201ENST00000330295 CDH23Q9H251 3354 aa19.04■□□□□ 0.64
CTHRC1-201ENST00000330295 SEMA6BQ9H3T3 888 aa19.04■□□□□ 0.64
CTHRC1-201ENST00000330295 DOCK3Q8IZD9 2030 aa19.03■□□□□ 0.64
CTHRC1-201ENST00000330295 MYLIPQ8WY64 445 aa19.03■□□□□ 0.64
CTHRC1-201ENST00000330295 HOOK2Q96ED9 719 aa19.03■□□□□ 0.64
CTHRC1-201ENST00000330295 LAS1LQ9Y4W2 734 aaKnown RBP19.03■□□□□ 0.64
CTHRC1-201ENST00000330295 PFASO15067 1338 aa19.02■□□□□ 0.64
CTHRC1-201ENST00000330295 ITGA6P23229 1130 aa19.02■□□□□ 0.64
CTHRC1-201ENST00000330295 MAP3K12Q12852 859 aa19.02■□□□□ 0.64
CTHRC1-201ENST00000330295 MFSD14BQ5SR56 506 aa19.02■□□□□ 0.64
CTHRC1-201ENST00000330295 INPP5BP32019 993 aa19.01■□□□□ 0.63
CTHRC1-201ENST00000330295 DUSP27Q5VZP5 1158 aa19.01■□□□□ 0.63
CTHRC1-201ENST00000330295 DCAF15Q66K64 600 aa19.01■□□□□ 0.63
CTHRC1-201ENST00000330295 GPAT2Q6NUI2 795 aa19.01■□□□□ 0.63
CTHRC1-201ENST00000330295 TAF5LO75529 589 aa19■□□□□ 0.63
CTHRC1-201ENST00000330295 FOSL2P15408 326 aa19■□□□□ 0.63
CTHRC1-201ENST00000330295 CRKP46108 304 aa19■□□□□ 0.63
CTHRC1-201ENST00000330295 CACNB3P54284 484 aa19■□□□□ 0.63
CTHRC1-201ENST00000330295 ZNF341Q9BYN7 854 aa19■□□□□ 0.63
CTHRC1-201ENST00000330295 HMX1Q9NP08 348 aaPredicted RBP19■□□□□ 0.63
CTHRC1-201ENST00000330295 OGDHLQ9ULD0 1010 aa19■□□□□ 0.63
CTHRC1-201ENST00000330295 A0A1B0GUL6 1792 aa18.99■□□□□ 0.63
CTHRC1-201ENST00000330295 HMGCRP04035 888 aa18.99■□□□□ 0.63
CTHRC1-201ENST00000330295 TMPOP42166 694 aaKnown RBP18.99■□□□□ 0.63
CTHRC1-201ENST00000330295 COA7Q96BR5 231 aa18.99■□□□□ 0.63
CTHRC1-201ENST00000330295 NCOR1O75376 2440 aa18.98■□□□□ 0.63
CTHRC1-201ENST00000330295 ZEB1P37275 1124 aaPredicted RBP18.98■□□□□ 0.63
CTHRC1-201ENST00000330295 LBHD1Q9BQE6 289 aaPredicted RBP18.98■□□□□ 0.63
CTHRC1-201ENST00000330295 IGKV5-2P06315 115 aa18.97■□□□□ 0.63
CTHRC1-201ENST00000330295 MIGA2Q7L4E1 593 aa18.97■□□□□ 0.63
CTHRC1-201ENST00000330295 FAM83AQ86UY5 434 aa18.97■□□□□ 0.63
CTHRC1-201ENST00000330295 TTYH1Q9H313 450 aaPredicted RBP18.97■□□□□ 0.63
CTHRC1-201ENST00000330295 DDX58O95786 925 aaKnown RBP18.96■□□□□ 0.63
CTHRC1-201ENST00000330295 COL6A1P12109 1028 aa18.96■□□□□ 0.63
CTHRC1-201ENST00000330295 LRRC26Q2I0M4 334 aa18.96■□□□□ 0.63
CTHRC1-201ENST00000330295 MAP3K2Q9Y2U5 619 aa18.96■□□□□ 0.63
CTHRC1-201ENST00000330295 SYNGAP1Q96PV0 1343 aa18.96■□□□□ 0.63
CTHRC1-201ENST00000330295 RPAP1Q9BWH6 1393 aaPredicted RBP18.95■□□□□ 0.62
CTHRC1-201ENST00000330295 CXCL11O14625 94 aa18.95■□□□□ 0.62
CTHRC1-201ENST00000330295 TRIM32Q13049 653 aa18.95■□□□□ 0.62
CTHRC1-201ENST00000330295 UBE3BQ7Z3V4 1068 aa18.95■□□□□ 0.62
CTHRC1-201ENST00000330295 TMOD2Q9NZR1 351 aa18.95■□□□□ 0.62
CTHRC1-201ENST00000330295 FKBP1CQ5VVH2 108 aa18.94■□□□□ 0.62
CTHRC1-201ENST00000330295 SMCR8Q8TEV9 937 aaPredicted RBP18.94■□□□□ 0.62
CTHRC1-201ENST00000330295 PLA2G12BQ9BX93 195 aa18.94■□□□□ 0.62
CTHRC1-201ENST00000330295 ZNF112Q9UJU3 913 aa18.94■□□□□ 0.62
CTHRC1-201ENST00000330295 NOL9Q5SY16 702 aaKnown RBP18.93■□□□□ 0.62
CTHRC1-201ENST00000330295 FASTKD5Q7L8L6 764 aaKnown RBP18.93■□□□□ 0.62
CTHRC1-201ENST00000330295 USP38Q8NB14 1042 aa18.93■□□□□ 0.62
CTHRC1-201ENST00000330295 TDRD7Q8NHU6 1098 aaKnown RBP18.93■□□□□ 0.62
CTHRC1-201ENST00000330295 SLC45A1Q9Y2W3 748 aa18.93■□□□□ 0.62
CTHRC1-201ENST00000330295 H7C1W4 665 aa18.92■□□□□ 0.62
CTHRC1-201ENST00000330295 CSF1RP07333 972 aa18.92■□□□□ 0.62
CTHRC1-201ENST00000330295 HDLBPQ00341 1268 aaKnown RBP18.92■□□□□ 0.62
CTHRC1-201ENST00000330295 A0A0G2JLL6 359 aaPredicted RBP18.91■□□□□ 0.62
CTHRC1-201ENST00000330295 NEUROD2Q15784 382 aa18.91■□□□□ 0.62
CTHRC1-201ENST00000330295 GRIK5Q16478 980 aa18.91■□□□□ 0.62
CTHRC1-201ENST00000330295 CWF19L2Q2TBE0 894 aaKnown RBP18.91■□□□□ 0.62
CTHRC1-201ENST00000330295 PRRT2Q7Z6L0 340 aaPredicted RBP18.91■□□□□ 0.62
CTHRC1-201ENST00000330295 PIEZO1Q92508 2521 aa18.9■□□□□ 0.62
CTHRC1-201ENST00000330295 ANKRD18BA2A2Z9 1011 aa18.9■□□□□ 0.62
CTHRC1-201ENST00000330295 NEURL1BA8MQ27 555 aa18.9■□□□□ 0.62
CTHRC1-201ENST00000330295 SMAD3P84022 425 aaKnown RBP18.9■□□□□ 0.62
CTHRC1-201ENST00000330295 NEXNQ0ZGT2 675 aa18.9■□□□□ 0.62
CTHRC1-201ENST00000330295 GADL1Q6ZQY3 521 aa18.9■□□□□ 0.62
CTHRC1-201ENST00000330295 ANKRD13CQ8N6S4 541 aa18.9■□□□□ 0.62
CTHRC1-201ENST00000330295 TEKT1Q969V4 418 aa18.9■□□□□ 0.62
CTHRC1-201ENST00000330295 ARIH1Q9Y4X5 557 aaPredicted RBP18.9■□□□□ 0.62
CTHRC1-201ENST00000330295 MAST2Q6P0Q8 1798 aa18.9■□□□□ 0.62
CTHRC1-201ENST00000330295 SHHQ15465 462 aa18.89■□□□□ 0.61
CTHRC1-201ENST00000330295 KSR2Q6VAB6 950 aa18.89■□□□□ 0.61
CTHRC1-201ENST00000330295 GJD2Q9UKL4 321 aa18.89■□□□□ 0.61
CTHRC1-201ENST00000330295 BDP1A6H8Y1 2624 aa18.89■□□□□ 0.61
CTHRC1-201ENST00000330295 LTBP2Q14767 1821 aa18.88■□□□□ 0.61
CTHRC1-201ENST00000330295 PI4KAP2A4QPH2 592 aa18.88■□□□□ 0.61
CTHRC1-201ENST00000330295 FAM110CQ1W6H9 321 aa18.88■□□□□ 0.61
CTHRC1-201ENST00000330295 MAP3K21Q5TCX8 1036 aa18.88■□□□□ 0.61
CTHRC1-201ENST00000330295 PI4KAP1Q8N8J0 262 aa18.88■□□□□ 0.61
CTHRC1-201ENST00000330295 ZDHHC15Q96MV8 337 aa18.88■□□□□ 0.61
CTHRC1-201ENST00000330295 TRIM35Q9UPQ4 493 aa18.88■□□□□ 0.61
CTHRC1-201ENST00000330295 PTPRFP10586 1907 aa18.88■□□□□ 0.61
CTHRC1-201ENST00000330295 PRKAR2AP13861 404 aaKnown RBP18.87■□□□□ 0.61
CTHRC1-201ENST00000330295 C9orf50Q5SZB4 431 aa18.87■□□□□ 0.61
CTHRC1-201ENST00000330295 APOBEC3HQ6NTF7 200 aaKnown RBP18.87■□□□□ 0.61
CTHRC1-201ENST00000330295 ADAMTS19Q8TE59 1207 aa18.87■□□□□ 0.61
CTHRC1-201ENST00000330295 TRIB2Q92519 343 aa18.87■□□□□ 0.61
CTHRC1-201ENST00000330295 MBIPQ9NS73 344 aa18.87■□□□□ 0.61
CTHRC1-201ENST00000330295 ZHX2Q9Y6X8 837 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms