RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 ARHGEF10LQ9HCE6 1279 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 GUCA1BQ9UMX6 200 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 LUC7L2Q9Y383 392 aaKnown RBP17.31■□□□□ 0.36
PTPN21-201ENST00000328736 CCDC25Q86WR0 208 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 IFT74Q96LB3 600 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 CPA1P15085 419 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 APOBRQ0VD83 1088 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 LIN9Q5TKA1 542 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 CDAN1Q8IWY9 1227 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 ZMYND15Q9H091 742 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 CALUO43852 315 aaPredicted RBP17.31■□□□□ 0.36
PTPN21-201ENST00000328736 ERCC5P28715 1186 aaPredicted RBP17.31■□□□□ 0.36
PTPN21-201ENST00000328736 STRN3Q13033 797 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 NOLC1Q14978 699 aaKnown RBP eCLIP17.31■□□□□ 0.36
PTPN21-201ENST00000328736 HAUS2Q9NVX0 235 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 FAM184BQ9ULE4 1060 aa17.31■□□□□ 0.36
PTPN21-201ENST00000328736 ARID4AP29374 1257 aaPredicted RBP17.3■□□□□ 0.36
PTPN21-201ENST00000328736 SP4Q02446 784 aa17.3■□□□□ 0.36
PTPN21-201ENST00000328736 CEP85Q6P2H3 762 aa17.3■□□□□ 0.36
PTPN21-201ENST00000328736 CPLX4Q7Z7G2 160 aa17.3■□□□□ 0.36
PTPN21-201ENST00000328736 CARD14Q9BXL6 1004 aa17.3■□□□□ 0.36
PTPN21-201ENST00000328736 CIB2O75838 187 aa17.3■□□□□ 0.36
PTPN21-201ENST00000328736 RASA3Q14644 834 aa17.3■□□□□ 0.36
PTPN21-201ENST00000328736 CNGA4Q8IV77 575 aa17.3■□□□□ 0.36
PTPN21-201ENST00000328736 GLT8D2Q9H1C3 349 aa17.3■□□□□ 0.36
PTPN21-201ENST00000328736 CLUL1Q15846 466 aa17.3■□□□□ 0.36
PTPN21-201ENST00000328736 ATL3Q6DD88 541 aa17.3■□□□□ 0.36
PTPN21-201ENST00000328736 LINS1Q8NG48 757 aa17.3■□□□□ 0.36
PTPN21-201ENST00000328736 GPHNQ9NQX3 736 aaPredicted RBP17.3■□□□□ 0.36
PTPN21-201ENST00000328736 SMIM23A6NLE4 172 aa17.3■□□□□ 0.36
PTPN21-201ENST00000328736 IFT81Q8WYA0 676 aa17.3■□□□□ 0.36
PTPN21-201ENST00000328736 HOOK2Q96ED9 719 aa17.3■□□□□ 0.36
PTPN21-201ENST00000328736 AFAP1L2Q8N4X5 818 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 MAST3O60307 1309 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 RIMS2Q9UQ26 1411 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 GEN1Q17RS7 908 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 ZNF569Q5MCW4 686 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 HAUS3Q68CZ6 603 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 PRPF31Q8WWY3 499 aaKnown RBP17.29■□□□□ 0.36
PTPN21-201ENST00000328736 NKIRAS1Q9NYS0 192 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 ATP10BO94823 1461 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 DUOX2Q9NRD8 1548 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 AK2P54819 239 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 TRPC3Q13507 836 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 LEO1Q8WVC0 666 aaPredicted RBP17.29■□□□□ 0.36
PTPN21-201ENST00000328736 PFDN4Q9NQP4 134 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 HELLSQ9NRZ9 838 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 PLCH2O75038 1416 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 ITSN2Q9NZM3 1697 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 DHX32Q7L7V1 743 aaKnown RBP17.29■□□□□ 0.36
PTPN21-201ENST00000328736 NOX5Q96PH1 765 aa17.29■□□□□ 0.36
PTPN21-201ENST00000328736 TNFAIP3P21580 790 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 CCT6AP40227 531 aaKnown RBP17.28■□□□□ 0.36
PTPN21-201ENST00000328736 PARD3Q8TEW0 1356 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 PTPDC1A2A3K4 754 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 STX17P56962 302 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 TYRO3Q06418 890 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 NBPF11Q86T75 865 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 RPUSD2Q8IZ73 545 aaKnown RBP17.28■□□□□ 0.36
PTPN21-201ENST00000328736 VPS52Q8N1B4 723 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 PPP1R9BQ96SB3 815 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 TRIM14Q14142 442 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 CREB3L3Q68CJ9 461 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 CERS3Q8IU89 383 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 BICC1Q9H694 974 aaKnown RBP17.28■□□□□ 0.36
PTPN21-201ENST00000328736 PCDH11XQ9BZA7 1347 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 PCDH11YQ9BZA8 1340 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 DAPK3O43293 454 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 TRAPPC3LQ5T215 181 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 ABCC1P33527 1531 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 ELP1O95163 1332 aa17.28■□□□□ 0.36
PTPN21-201ENST00000328736 ECM2O94769 699 aaPredicted RBP17.27■□□□□ 0.36
PTPN21-201ENST00000328736 CNNM4Q6P4Q7 775 aa17.27■□□□□ 0.36
PTPN21-201ENST00000328736 TEX11Q8IYF3 940 aa17.27■□□□□ 0.36
PTPN21-201ENST00000328736 VAMP4O75379 141 aa17.27■□□□□ 0.36
PTPN21-201ENST00000328736 RAB3GAP1Q15042 981 aa17.27■□□□□ 0.36
PTPN21-201ENST00000328736 RUFY3Q7L099 469 aa17.27■□□□□ 0.36
PTPN21-201ENST00000328736 UBLCP1Q8WVY7 318 aaPredicted RBP17.27■□□□□ 0.36
PTPN21-201ENST00000328736 ZKSCAN3Q9BRR0 538 aa17.27■□□□□ 0.36
PTPN21-201ENST00000328736 SPOPO43791 374 aa17.27■□□□□ 0.35
PTPN21-201ENST00000328736 PPP1R21Q6ZMI0 780 aa17.27■□□□□ 0.35
PTPN21-201ENST00000328736 INTS8Q75QN2 995 aaKnown RBP17.27■□□□□ 0.35
PTPN21-201ENST00000328736 PLIN2Q99541 437 aa17.27■□□□□ 0.35
PTPN21-201ENST00000328736 TLDC2A0PJX2 215 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 CCDC169A6NNP5 214 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 G2E3Q7L622 706 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 TRAPPC8Q9Y2L5 1435 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 TRAF5O00463 557 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 EBAG9O00559 213 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 HARSP12081 509 aaKnown RBP17.26■□□□□ 0.35
PTPN21-201ENST00000328736 FYB2Q5VWT5 728 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 TBC1D31Q96DN5 1066 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.26■□□□□ 0.35
PTPN21-201ENST00000328736 LPXNO60711 386 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 PRIM1P49642 420 aaKnown RBP17.26■□□□□ 0.35
PTPN21-201ENST00000328736 KARSQ15046 597 aaKnown RBP17.26■□□□□ 0.35
PTPN21-201ENST00000328736 PPFIBP2Q8ND30 876 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 GJA3Q9Y6H8 435 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 MAP3K5Q99683 1374 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 XRCC6P12956 609 aaKnown RBP eCLIP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms