RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 SNX14Q9Y5W7 946 aa12.96□□□□□ -0.33
COL4A5-201ENST00000328300 TSPYL1Q9H0U9 437 aa12.96□□□□□ -0.33
COL4A5-201ENST00000328300 HEG1Q9ULI3 1381 aa12.96□□□□□ -0.33
COL4A5-201ENST00000328300 N4BP3O15049 544 aa12.96□□□□□ -0.33
COL4A5-201ENST00000328300 HAUS3Q68CZ6 603 aa12.96□□□□□ -0.33
COL4A5-201ENST00000328300 LRRC2Q9BYS8 371 aa12.96□□□□□ -0.33
COL4A5-201ENST00000328300 CNPY2Q9Y2B0 182 aa12.96□□□□□ -0.33
COL4A5-201ENST00000328300 GBP2P32456 591 aaPredicted RBP12.96□□□□□ -0.34
COL4A5-201ENST00000328300 NCBP1Q09161 790 aaKnown RBP12.96□□□□□ -0.34
COL4A5-201ENST00000328300 AXDND1Q5T1B0 1012 aaPredicted RBP12.96□□□□□ -0.34
COL4A5-201ENST00000328300 UNC5CLQ8IV45 518 aa12.96□□□□□ -0.34
COL4A5-201ENST00000328300 FERMT1Q9BQL6 677 aa12.95□□□□□ -0.34
COL4A5-201ENST00000328300 LARGE2Q8N3Y3 721 aa12.95□□□□□ -0.34
COL4A5-201ENST00000328300 HAUS7Q99871 368 aa12.95□□□□□ -0.34
COL4A5-201ENST00000328300 ARMT1Q9H993 441 aa12.95□□□□□ -0.34
COL4A5-201ENST00000328300 FRMPD1Q5SYB0 1578 aa12.95□□□□□ -0.34
COL4A5-201ENST00000328300 ASIC1P78348 528 aa12.95□□□□□ -0.34
COL4A5-201ENST00000328300 UBE3CQ15386 1083 aa12.95□□□□□ -0.34
COL4A5-201ENST00000328300 TMC6Q7Z403 805 aa12.95□□□□□ -0.34
COL4A5-201ENST00000328300 FERMT2Q96AC1 680 aa12.95□□□□□ -0.34
COL4A5-201ENST00000328300 OSBPL3Q9H4L5 887 aa12.95□□□□□ -0.34
COL4A5-201ENST00000328300 RPL13P26373 211 aaKnown RBP12.95□□□□□ -0.34
COL4A5-201ENST00000328300 CC2D2BQ6DHV5 1058 aa12.95□□□□□ -0.34
COL4A5-201ENST00000328300 ARHGEF40Q8TER5 1519 aa12.95□□□□□ -0.34
COL4A5-201ENST00000328300 TCERG1LQ5VWI1 586 aa12.94□□□□□ -0.34
COL4A5-201ENST00000328300 BICD1Q96G01 975 aa12.94□□□□□ -0.34
COL4A5-201ENST00000328300 LARP6Q9BRS8 491 aaKnown RBP12.94□□□□□ -0.34
COL4A5-201ENST00000328300 KIF4BQ2VIQ3 1234 aa12.94□□□□□ -0.34
COL4A5-201ENST00000328300 HS2ST1Q7LGA3 356 aa12.94□□□□□ -0.34
COL4A5-201ENST00000328300 DDX17Q92841 729 aaKnown RBP12.94□□□□□ -0.34
COL4A5-201ENST00000328300 GOPCQ9HD26 462 aa12.94□□□□□ -0.34
COL4A5-201ENST00000328300 PODXL2Q9NZ53 605 aa12.94□□□□□ -0.34
COL4A5-201ENST00000328300 E9PCH4 1651 aa12.94□□□□□ -0.34
COL4A5-201ENST00000328300 ADCY5O95622 1261 aa12.94□□□□□ -0.34
COL4A5-201ENST00000328300 PAXIP1Q6ZW49 1069 aaPredicted RBP12.94□□□□□ -0.34
COL4A5-201ENST00000328300 FAM160A1Q05DH4 1040 aa12.94□□□□□ -0.34
COL4A5-201ENST00000328300 HS1BP3Q53T59 392 aa12.94□□□□□ -0.34
COL4A5-201ENST00000328300 GALNT17Q6IS24 598 aa12.94□□□□□ -0.34
COL4A5-201ENST00000328300 ZNF532Q9HCE3 1301 aa12.94□□□□□ -0.34
COL4A5-201ENST00000328300 RAB11FIP4Q86YS3 637 aa12.94□□□□□ -0.34
COL4A5-201ENST00000328300 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
COL4A5-201ENST00000328300 ABCA6Q8N139 1617 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 OVOS2A0A0G2JMS6 1433 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 OVOS2A0A0J9YW53 1432 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 OVOS2Q6IE36 1432 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 CUTAO60888 179 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 ZNF274Q96GC6 653 aaPredicted RBP12.93□□□□□ -0.34
COL4A5-201ENST00000328300 AS3MTQ9HBK9 375 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 FAM13AO94988 1023 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 BRINP3Q76B58 766 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 TEKT1Q969V4 418 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 PAXBP1Q9Y5B6 917 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 XDHP47989 1333 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 CRKLP46109 303 aaKnown RBP12.93□□□□□ -0.34
COL4A5-201ENST00000328300 DNM1Q05193 864 aaKnown RBP12.93□□□□□ -0.34
COL4A5-201ENST00000328300 AKNAD1Q5T1N1 836 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 DACT1Q9NYF0 836 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 UBASH3AP57075 661 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 CKAP4Q07065 602 aaKnown RBP12.93□□□□□ -0.34
COL4A5-201ENST00000328300 CLEC4GQ6UXB4 293 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 CCDC65Q8IXS2 484 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 TCEANC2Q96MN5 208 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 IMPG2Q9BZV3 1241 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 RPAP1Q9BWH6 1393 aaPredicted RBP12.93□□□□□ -0.34
COL4A5-201ENST00000328300 LMBR1Q8WVP7 490 aa12.93□□□□□ -0.34
COL4A5-201ENST00000328300 ZNF594Q96JF6 807 aaPredicted RBP12.93□□□□□ -0.34
COL4A5-201ENST00000328300 SYT1P21579 422 aa12.92□□□□□ -0.34
COL4A5-201ENST00000328300 SSR1P43307 286 aaKnown RBP12.92□□□□□ -0.34
COL4A5-201ENST00000328300 GDPD2Q9HCC8 539 aa12.92□□□□□ -0.34
COL4A5-201ENST00000328300 ZAP70P43403 619 aa12.92□□□□□ -0.34
COL4A5-201ENST00000328300 GRIPAP1Q4V328 841 aa12.92□□□□□ -0.34
COL4A5-201ENST00000328300 TMCO3Q6UWJ1 677 aa12.92□□□□□ -0.34
COL4A5-201ENST00000328300 B4E1Z4 1266 aa12.92□□□□□ -0.34
COL4A5-201ENST00000328300 BIN1O00499 593 aa12.92□□□□□ -0.34
COL4A5-201ENST00000328300 BBOX1O75936 387 aa12.92□□□□□ -0.34
COL4A5-201ENST00000328300 SV2BQ7L1I2 683 aa12.92□□□□□ -0.34
COL4A5-201ENST00000328300 SPAG5Q96R06 1193 aa12.92□□□□□ -0.34
COL4A5-201ENST00000328300 IGSF3O75054 1194 aa12.92□□□□□ -0.34
COL4A5-201ENST00000328300 KRT83P78385 493 aa12.92□□□□□ -0.34
COL4A5-201ENST00000328300 FAM177A1Q8N128 213 aaPredicted RBP12.92□□□□□ -0.34
COL4A5-201ENST00000328300 MSANTD4Q8NCY6 345 aa12.92□□□□□ -0.34
COL4A5-201ENST00000328300 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.92□□□□□ -0.34
COL4A5-201ENST00000328300 ZBED4O75132 1171 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 ADCY7P51828 1080 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 TRIM14Q14142 442 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 DLGAP5Q15398 846 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 LUZP1Q86V48 1076 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 CRACR2AQ9BSW2 395 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 QTRT2Q9H974 415 aaKnown RBP12.91□□□□□ -0.34
COL4A5-201ENST00000328300 QRICH2Q9H0J4 1663 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 CEP152O94986 1710 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 PTPRUQ92729 1446 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 IQCDQ96DY2 449 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 PLEKHG2Q9H7P9 1386 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 GOLGA6L7A0A1B0GV03 622 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 PPARAQ07869 468 aa12.91□□□□□ -0.34
COL4A5-201ENST00000328300 NONOQ15233 471 aaKnown RBP eCLIP12.91□□□□□ -0.34
COL4A5-201ENST00000328300 BRDTQ58F21 947 aaPredicted RBP12.91□□□□□ -0.34
COL4A5-201ENST00000328300 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.91□□□□□ -0.34
COL4A5-201ENST00000328300 ANO6Q4KMQ2 910 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms