RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 MYSM1Q5VVJ2 828 aa11.27□□□□□ -0.61
SP1-201ENST00000327443 CEP85Q6P2H3 762 aa11.27□□□□□ -0.61
SP1-201ENST00000327443 USP48Q86UV5 1035 aa11.27□□□□□ -0.61
SP1-201ENST00000327443 MSL3Q8N5Y2 521 aaKnown RBP11.27□□□□□ -0.61
SP1-201ENST00000327443 ZKSCAN4Q969J2 545 aaPredicted RBP11.27□□□□□ -0.61
SP1-201ENST00000327443 USP26Q9BXU7 913 aa11.27□□□□□ -0.61
SP1-201ENST00000327443 EPC1Q9H2F5 836 aa11.27□□□□□ -0.61
SP1-201ENST00000327443 BCORQ6W2J9 1755 aa11.27□□□□□ -0.61
SP1-201ENST00000327443 SBF2Q86WG5 1849 aa11.27□□□□□ -0.61
SP1-201ENST00000327443 APBB1O00213 710 aa11.27□□□□□ -0.61
SP1-201ENST00000327443 DDB1Q16531 1140 aa11.27□□□□□ -0.61
SP1-201ENST00000327443 NCAPG2Q86XI2 1143 aa11.27□□□□□ -0.61
SP1-201ENST00000327443 TUBGCP6Q96RT7 1819 aa11.26□□□□□ -0.61
SP1-201ENST00000327443 ENO4A6NNW6 628 aa11.26□□□□□ -0.61
SP1-201ENST00000327443 MX1P20591 662 aa11.26□□□□□ -0.61
SP1-201ENST00000327443 CD151P48509 253 aa11.26□□□□□ -0.61
SP1-201ENST00000327443 ICA1Q05084 483 aa11.26□□□□□ -0.61
SP1-201ENST00000327443 CC2D1AQ6P1N0 951 aaPredicted RBP11.26□□□□□ -0.61
SP1-201ENST00000327443 ARL10Q8N8L6 244 aa11.26□□□□□ -0.61
SP1-201ENST00000327443 SMARCC1Q92922 1105 aaPredicted RBP11.26□□□□□ -0.61
SP1-201ENST00000327443 YIPF2Q9BWQ6 316 aa11.26□□□□□ -0.61
SP1-201ENST00000327443 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.26□□□□□ -0.61
SP1-201ENST00000327443 CHMLP26374 656 aa11.26□□□□□ -0.61
SP1-201ENST00000327443 RGPD3A6NKT7 1758 aaPredicted RBP11.25□□□□□ -0.61
SP1-201ENST00000327443 LAMB2P55268 1798 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 RGPD4Q7Z3J3 1758 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 RBM47A0AV96 593 aaKnown RBP11.25□□□□□ -0.61
SP1-201ENST00000327443 PYGBP11216 843 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 NEFHP12036 1026 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 ATP8B2P98198 1209 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 TBC1D9Q6ZT07 1266 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 IQCA1Q86XH1 822 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 SIRT2Q8IXJ6 389 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 PLBD2Q8NHP8 589 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 METTL22Q9BUU2 404 aaPredicted RBP11.25□□□□□ -0.61
SP1-201ENST00000327443 AKAP2Q9Y2D5 859 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.25□□□□□ -0.616e-6■□□□□ 9.8
SP1-201ENST00000327443 A0A1B0GUA9 196 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 RAB27AP51159 221 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 POLA2Q14181 598 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 ISM2Q6H9L7 571 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 L2HGDHQ9H9P8 463 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 MRFAP1Q9Y605 127 aa11.25□□□□□ -0.61
SP1-201ENST00000327443 PPFIA4O75335 1185 aa11.24□□□□□ -0.61
SP1-201ENST00000327443 CDKL5O76039 1030 aa11.24□□□□□ -0.61
SP1-201ENST00000327443 MCM2P49736 904 aa11.24□□□□□ -0.61
SP1-201ENST00000327443 TRIM28Q13263 835 aaKnown RBP11.24□□□□□ -0.61
SP1-201ENST00000327443 ARID5BQ14865 1188 aa11.24□□□□□ -0.61
SP1-201ENST00000327443 PREPLQ4J6C6 727 aaPredicted RBP11.24□□□□□ -0.61
SP1-201ENST00000327443 SPDYE1Q8NFV5 336 aaPredicted RBP11.24□□□□□ -0.61
SP1-201ENST00000327443 PIGBQ92521 554 aa11.24□□□□□ -0.61
SP1-201ENST00000327443 TRIM5Q9C035 493 aa11.24□□□□□ -0.61
SP1-201ENST00000327443 USP44Q9H0E7 712 aa11.24□□□□□ -0.61
SP1-201ENST00000327443 ELP1O95163 1332 aa11.24□□□□□ -0.61
SP1-201ENST00000327443 AOX1Q06278 1338 aa11.24□□□□□ -0.61
SP1-201ENST00000327443 MRPL12P52815 198 aaKnown RBP11.24□□□□□ -0.61
SP1-201ENST00000327443 NAA25Q14CX7 972 aa11.24□□□□□ -0.61
SP1-201ENST00000327443 CCDC144BQ3MJ40 725 aa11.24□□□□□ -0.61
SP1-201ENST00000327443 CCDC144CPQ8IYA2 1237 aa11.24□□□□□ -0.61
SP1-201ENST00000327443 SSH3Q8TE77 659 aa11.24□□□□□ -0.61
SP1-201ENST00000327443 MKL1Q969V6 931 aa11.24□□□□□ -0.61
SP1-201ENST00000327443 DDX11Q96FC9 970 aa11.24□□□□□ -0.61
SP1-201ENST00000327443 PES1O00541 588 aaKnown RBP11.23□□□□□ -0.61
SP1-201ENST00000327443 RAB11FIP3O75154 756 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 CABS1Q96KC9 395 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 MEIS3Q99687 375 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 FUCA2Q9BTY2 467 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 FUT8Q9BYC5 575 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 FAM107BQ9H098 131 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 PHAXQ9H814 394 aaKnown RBP11.23□□□□□ -0.61
SP1-201ENST00000327443 BTAF1O14981 1849 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 ERC2O15083 957 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 ADAMTS2O95450 1211 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 STARD3NLO95772 234 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 RANBP1P43487 201 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 LUZP1Q86V48 1076 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 CHD1LQ86WJ1 897 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
SP1-201ENST00000327443 ARFGAP3Q9NP61 516 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 TBC1D2BQ9UPU7 963 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 SCN7AQ01118 1682 aa11.23□□□□□ -0.61
SP1-201ENST00000327443 PI4KAP2A4QPH2 592 aa11.22□□□□□ -0.61
SP1-201ENST00000327443 CHUKO15111 745 aa11.22□□□□□ -0.61
SP1-201ENST00000327443 UBTFL1P0CB47 393 aaPredicted RBP11.22□□□□□ -0.61
SP1-201ENST00000327443 EIF2S2P20042 333 aaKnown RBP11.22□□□□□ -0.61
SP1-201ENST00000327443 SLC39A6Q13433 755 aa11.22□□□□□ -0.61
SP1-201ENST00000327443 PI4KAP1Q8N8J0 262 aa11.22□□□□□ -0.61
SP1-201ENST00000327443 DDX54Q8TDD1 881 aaKnown RBP11.22□□□□□ -0.61
SP1-201ENST00000327443 TBC1D5Q92609 795 aa11.22□□□□□ -0.61
SP1-201ENST00000327443 BICC1Q9H694 974 aaKnown RBP11.22□□□□□ -0.61
SP1-201ENST00000327443 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.22□□□□□ -0.61
SP1-201ENST00000327443 BRD1O95696 1058 aa11.22□□□□□ -0.61
SP1-201ENST00000327443 NAT1P18440 290 aa11.22□□□□□ -0.61
SP1-201ENST00000327443 NEXNQ0ZGT2 675 aa11.22□□□□□ -0.61
SP1-201ENST00000327443 CCDC93Q567U6 631 aa11.22□□□□□ -0.61
SP1-201ENST00000327443 SPDL1Q96EA4 605 aa11.22□□□□□ -0.61
SP1-201ENST00000327443 TMX4Q9H1E5 349 aaPredicted RBP11.22□□□□□ -0.61
SP1-201ENST00000327443 FAN1Q9Y2M0 1017 aa11.22□□□□□ -0.61
SP1-201ENST00000327443 MAP3K2Q9Y2U5 619 aa11.22□□□□□ -0.61
SP1-201ENST00000327443 TPP2P29144 1249 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms