RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 SALL1Q9NSC2 1324 aa15.37■□□□□ 0.05
TPM3-204ENST00000323144 LOC285556D6RIA3 1793 aa15.36■□□□□ 0.05
TPM3-204ENST00000323144 CENPFP49454 3210 aa15.36■□□□□ 0.05
TPM3-204ENST00000323144 MGAMO43451 1857 aa15.36■□□□□ 0.05
TPM3-204ENST00000323144 CCL15-CCL14A0A0B4J2E2 113 aa15.36■□□□□ 0.05
TPM3-204ENST00000323144 TESPA1A2RU30 521 aaPredicted RBP15.36■□□□□ 0.05
TPM3-204ENST00000323144 SPDYE5A6NIY4 337 aa15.36■□□□□ 0.05
TPM3-204ENST00000323144 SRGAP3O43295 1099 aa15.36■□□□□ 0.05
TPM3-204ENST00000323144 CCL15Q16663 113 aa15.36■□□□□ 0.05
TPM3-204ENST00000323144 CCDC102BQ68D86 513 aa15.36■□□□□ 0.05
TPM3-204ENST00000323144 CDC42EP5Q6NZY7 148 aa15.36■□□□□ 0.05
TPM3-204ENST00000323144 FBXO46Q6PJ61 603 aaPredicted RBP15.36■□□□□ 0.05
TPM3-204ENST00000323144 FAM83AQ86UY5 434 aa15.36■□□□□ 0.05
TPM3-204ENST00000323144 FRAT1Q92837 279 aaPredicted RBP15.36■□□□□ 0.05
TPM3-204ENST00000323144 CLUAP1Q96AJ1 413 aa15.36■□□□□ 0.05
TPM3-204ENST00000323144 CSADQ9Y600 493 aa15.36■□□□□ 0.05
TPM3-204ENST00000323144 TCP10Q12799 353 aa15.35■□□□□ 0.05
TPM3-204ENST00000323144 TFCP2Q12800 502 aa15.35■□□□□ 0.05
TPM3-204ENST00000323144 MTX1Q13505 466 aa15.35■□□□□ 0.05
TPM3-204ENST00000323144 FKBP1CQ5VVH2 108 aa15.35■□□□□ 0.05
TPM3-204ENST00000323144 OTOP1Q7RTM1 612 aa15.35■□□□□ 0.05
TPM3-204ENST00000323144 FAM43AQ8N2R8 423 aa15.35■□□□□ 0.05
TPM3-204ENST00000323144 ARHGAP45Q92619 1136 aa15.35■□□□□ 0.05
TPM3-204ENST00000323144 ZKSCAN4Q969J2 545 aaPredicted RBP15.35■□□□□ 0.05
TPM3-204ENST00000323144 TRIM17Q9Y577 477 aa15.35■□□□□ 0.05
TPM3-204ENST00000323144 PNMA6EA0A0J9YXQ4 647 aa15.34■□□□□ 0.05
TPM3-204ENST00000323144 A0A1B0GUL7 405 aa15.34■□□□□ 0.05
TPM3-204ENST00000323144 LDHBP07195 334 aaKnown RBP15.34■□□□□ 0.05
TPM3-204ENST00000323144 GNAI3P08754 354 aa15.34■□□□□ 0.05
TPM3-204ENST00000323144 INPP5BP32019 993 aa15.34■□□□□ 0.05
TPM3-204ENST00000323144 INHBEP58166 350 aa15.34■□□□□ 0.05
TPM3-204ENST00000323144 MAP3K9P80192 1104 aa15.34■□□□□ 0.05
TPM3-204ENST00000323144 PKN2Q16513 984 aaKnown RBP15.34■□□□□ 0.05
TPM3-204ENST00000323144 PI16Q6UXB8 463 aa15.34■□□□□ 0.05
TPM3-204ENST00000323144 ATF7IPQ6VMQ6 1270 aa15.34■□□□□ 0.05
TPM3-204ENST00000323144 FAM198AQ9UFP1 575 aa15.34■□□□□ 0.05
TPM3-204ENST00000323144 GAKO14976 1311 aa15.34■□□□□ 0.05
TPM3-204ENST00000323144 SEMA3EO15041 775 aa15.33■□□□□ 0.04
TPM3-204ENST00000323144 MIGA2Q7L4E1 593 aa15.33■□□□□ 0.04
TPM3-204ENST00000323144 TMEM57Q8N5G2 664 aa15.33■□□□□ 0.04
TPM3-204ENST00000323144 DENND2AQ9ULE3 1009 aa15.33■□□□□ 0.04
TPM3-204ENST00000323144 BRCA2P51587 3418 aa15.33■□□□□ 0.04
TPM3-204ENST00000323144 DDX60LQ5H9U9 1706 aaKnown RBP15.33■□□□□ 0.04
TPM3-204ENST00000323144 SLURP2P0DP57 97 aa15.32■□□□□ 0.04
TPM3-204ENST00000323144 TIMM10P62072 90 aa15.32■□□□□ 0.04
TPM3-204ENST00000323144 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.04
TPM3-204ENST00000323144 TAF1CQ15572 869 aaPredicted RBP15.32■□□□□ 0.04
TPM3-204ENST00000323144 ZFPM1Q8IX07 1006 aa15.32■□□□□ 0.04
TPM3-204ENST00000323144 MIER1Q8N108 512 aa15.32■□□□□ 0.04
TPM3-204ENST00000323144 ZNF384Q8TF68 577 aa15.32■□□□□ 0.04
TPM3-204ENST00000323144 FAM151AQ8WW52 585 aa15.32■□□□□ 0.04
TPM3-204ENST00000323144 XAGE2Q96GT9 111 aa15.32■□□□□ 0.04
TPM3-204ENST00000323144 MRIQ9BWK5 157 aa15.32■□□□□ 0.04
TPM3-204ENST00000323144 ZNF341Q9BYN7 854 aa15.32■□□□□ 0.04
TPM3-204ENST00000323144 GNL3LQ9NVN8 582 aaKnown RBP15.32■□□□□ 0.04
TPM3-204ENST00000323144 PDS5AQ29RF7 1337 aaKnown RBP15.32■□□□□ 0.04
TPM3-204ENST00000323144 PDE4DIPQ5VU43 2346 aa15.31■□□□□ 0.04
TPM3-204ENST00000323144 IRF6O14896 467 aa15.31■□□□□ 0.04
TPM3-204ENST00000323144 GTF2A2P52657 109 aa15.31■□□□□ 0.04
TPM3-204ENST00000323144 PPIL2Q13356 520 aa15.31■□□□□ 0.04
TPM3-204ENST00000323144 DCAF15Q66K64 600 aa15.31■□□□□ 0.04
TPM3-204ENST00000323144 ERO1BQ86YB8 467 aa15.31■□□□□ 0.04
TPM3-204ENST00000323144 DZIP1Q86YF9 867 aaKnown RBP15.31■□□□□ 0.04
TPM3-204ENST00000323144 ERO1AQ96HE7 468 aa15.31■□□□□ 0.04
TPM3-204ENST00000323144 C1orf115Q9H7X2 142 aa15.31■□□□□ 0.04
TPM3-204ENST00000323144 MROH7-TTC4A0A0A0MT08 1334 aa15.31■□□□□ 0.04
TPM3-204ENST00000323144 BTBD19C9JJ37 291 aa15.3■□□□□ 0.04
TPM3-204ENST00000323144 GNAI2P04899 355 aa15.3■□□□□ 0.04
TPM3-204ENST00000323144 RGS3P49796 1198 aa15.3■□□□□ 0.04
TPM3-204ENST00000323144 OTUD7BQ6GQQ9 843 aa15.3■□□□□ 0.04
TPM3-204ENST00000323144 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.3■□□□□ 0.04
TPM3-204ENST00000323144 NAV1Q8NEY1 1877 aa15.3■□□□□ 0.04
TPM3-204ENST00000323144 DDX4Q9NQI0 724 aaKnown RBP15.3■□□□□ 0.04
TPM3-204ENST00000323144 USP40Q9NVE5 1235 aa15.3■□□□□ 0.04
TPM3-204ENST00000323144 ABCF2Q9UG63 623 aa15.3■□□□□ 0.04
TPM3-204ENST00000323144 HDAC5Q9UQL6 1122 aa15.3■□□□□ 0.04
TPM3-204ENST00000323144 BTDP43251 543 aa15.29■□□□□ 0.04
TPM3-204ENST00000323144 SP3Q02447 781 aa15.29■□□□□ 0.04
TPM3-204ENST00000323144 MVPQ14764 893 aaKnown RBP15.29■□□□□ 0.04
TPM3-204ENST00000323144 SH3BP5LQ7L8J4 393 aa15.29■□□□□ 0.04
TPM3-204ENST00000323144 HOOK2Q96ED9 719 aa15.29■□□□□ 0.04
TPM3-204ENST00000323144 ARHGAP39Q9C0H5 1083 aa15.29■□□□□ 0.04
TPM3-204ENST00000323144 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.29■□□□□ 0.04
TPM3-204ENST00000323144 ADGRA2Q96PE1 1338 aa15.28■□□□□ 0.04
TPM3-204ENST00000323144 ZBTB22O15209 634 aa15.28■□□□□ 0.04
TPM3-204ENST00000323144 IPO8O15397 1037 aaKnown RBP15.28■□□□□ 0.04
TPM3-204ENST00000323144 WDHD1O75717 1129 aaPredicted RBP15.28■□□□□ 0.04
TPM3-204ENST00000323144 RLBP1P12271 317 aa15.28■□□□□ 0.04
TPM3-204ENST00000323144 PICALMQ13492 652 aa15.28■□□□□ 0.04
TPM3-204ENST00000323144 HMG20BQ9P0W2 317 aa15.28■□□□□ 0.04
TPM3-204ENST00000323144 ZNF112Q9UJU3 913 aa15.28■□□□□ 0.04
TPM3-204ENST00000323144 PTPN22Q9Y2R2 807 aa15.28■□□□□ 0.04
TPM3-204ENST00000323144 COL2A1P02458 1487 aaPredicted RBP15.27■□□□□ 0.04
TPM3-204ENST00000323144 POTEFA5A3E0 1075 aa15.27■□□□□ 0.04
TPM3-204ENST00000323144 ECM2O94769 699 aaPredicted RBP15.27■□□□□ 0.04
TPM3-204ENST00000323144 CETPP11597 493 aa15.27■□□□□ 0.04
TPM3-204ENST00000323144 ARID4AP29374 1257 aaPredicted RBP15.27■□□□□ 0.04
TPM3-204ENST00000323144 MCAMP43121 646 aa15.27■□□□□ 0.04
TPM3-204ENST00000323144 MECOMQ03112 1051 aa15.27■□□□□ 0.04
TPM3-204ENST00000323144 SNAPC2Q13487 334 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms