RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 ALDH1L1O75891 902 aa24.72■■□□□ 1.55
SSNA1-201ENST00000322310 FMNL1O95466 1100 aaPredicted RBP24.72■■□□□ 1.55
SSNA1-201ENST00000322310 NBPF7P0C2Y1 421 aaPredicted RBP24.72■■□□□ 1.55
SSNA1-201ENST00000322310 CAVIN4Q5BKX8 364 aa24.72■■□□□ 1.55
SSNA1-201ENST00000322310 METTL24Q5JXM2 366 aa24.72■■□□□ 1.55
SSNA1-201ENST00000322310 FKBP1CQ5VVH2 108 aa24.72■■□□□ 1.55
SSNA1-201ENST00000322310 ANKRD23Q86SG2 305 aa24.72■■□□□ 1.55
SSNA1-201ENST00000322310 ZNF341Q9BYN7 854 aa24.72■■□□□ 1.55
SSNA1-201ENST00000322310 SRCIN1Q9C0H9 1055 aa24.72■■□□□ 1.55
SSNA1-201ENST00000322310 CCL5P13501 91 aa24.71■■□□□ 1.55
SSNA1-201ENST00000322310 BCAMP50895 628 aa24.71■■□□□ 1.55
SSNA1-201ENST00000322310 UBE2Q1Q7Z7E8 422 aa24.71■■□□□ 1.55
SSNA1-201ENST00000322310 RPAP1Q9BWH6 1393 aaPredicted RBP24.7■■□□□ 1.55
SSNA1-201ENST00000322310 MYPNQ86TC9 1320 aa24.7■■□□□ 1.54
SSNA1-201ENST00000322310 GJA8P48165 433 aa24.7■■□□□ 1.54
SSNA1-201ENST00000322310 NKX2-3Q8TAU0 364 aa24.7■■□□□ 1.54
SSNA1-201ENST00000322310 BICC1Q9H694 974 aaKnown RBP24.7■■□□□ 1.54
SSNA1-201ENST00000322310 SPINK5Q9NQ38 1064 aaPredicted RBP24.7■■□□□ 1.54
SSNA1-201ENST00000322310 GJB1P08034 283 aa24.69■■□□□ 1.54
SSNA1-201ENST00000322310 HOXD10P28358 340 aa24.69■■□□□ 1.54
SSNA1-201ENST00000322310 MOGSQ13724 837 aa24.69■■□□□ 1.54
SSNA1-201ENST00000322310 NCBP3Q53F19 620 aaKnown RBP24.69■■□□□ 1.54
SSNA1-201ENST00000322310 WDR63Q8IWG1 891 aa24.69■■□□□ 1.54
SSNA1-201ENST00000322310 VGLL2Q8N8G2 317 aa24.69■■□□□ 1.54
SSNA1-201ENST00000322310 MRIQ9BWK5 157 aa24.69■■□□□ 1.54
SSNA1-201ENST00000322310 RNF208Q9H0X6 261 aa24.69■■□□□ 1.54
SSNA1-201ENST00000322310 BIN2Q9UBW5 565 aaPredicted RBP24.69■■□□□ 1.54
SSNA1-201ENST00000322310 KCNH4Q9UQ05 1017 aa24.68■■□□□ 1.54
SSNA1-201ENST00000322310 MAST3O60307 1309 aa24.67■■□□□ 1.54
SSNA1-201ENST00000322310 PDE8BO95263 885 aa24.67■■□□□ 1.54
SSNA1-201ENST00000322310 PRKCZQ05513 592 aa24.67■■□□□ 1.54
SSNA1-201ENST00000322310 TCP10Q12799 353 aa24.67■■□□□ 1.54
SSNA1-201ENST00000322310 HHIPL2Q6UWX4 724 aa24.67■■□□□ 1.54
SSNA1-201ENST00000322310 KLHDC4Q8TBB5 520 aa24.67■■□□□ 1.54
SSNA1-201ENST00000322310 HTATIP2Q9BUP3 242 aa24.67■■□□□ 1.54
SSNA1-201ENST00000322310 PRO3102Q9H379 93 aa24.67■■□□□ 1.54
SSNA1-201ENST00000322310 RABL6Q3YEC7 729 aaPredicted RBP24.66■■□□□ 1.54
SSNA1-201ENST00000322310 ZNF112Q9UJU3 913 aa24.66■■□□□ 1.54
SSNA1-201ENST00000322310 SUGT1Q9Y2Z0 365 aa24.66■■□□□ 1.54
SSNA1-201ENST00000322310 ANKRD44Q8N8A2 993 aa24.65■■□□□ 1.54
SSNA1-201ENST00000322310 FAM151AQ8WW52 585 aa24.65■■□□□ 1.54
SSNA1-201ENST00000322310 UTYO14607 1347 aa24.64■■□□□ 1.54
SSNA1-201ENST00000322310 CYP2C8P10632 490 aa24.64■■□□□ 1.54
SSNA1-201ENST00000322310 UBXN2AP68543 259 aa24.64■■□□□ 1.54
SSNA1-201ENST00000322310 U2AF1L4Q8WU68 220 aaKnown RBP24.64■■□□□ 1.54
SSNA1-201ENST00000322310 UNC93B1Q9H1C4 597 aa24.64■■□□□ 1.54
SSNA1-201ENST00000322310 GABRQQ9UN88 632 aa24.64■■□□□ 1.54
SSNA1-201ENST00000322310 FARP2O94887 1054 aaPredicted RBP24.63■■□□□ 1.53
SSNA1-201ENST00000322310 BCRP11274 1271 aa24.63■■□□□ 1.53
SSNA1-201ENST00000322310 NFIAQ12857 509 aa24.63■■□□□ 1.53
SSNA1-201ENST00000322310 GPAT2Q6NUI2 795 aa24.63■■□□□ 1.53
SSNA1-201ENST00000322310 PARK7Q99497 189 aaKnown RBP24.63■■□□□ 1.53
SSNA1-201ENST00000322310 NR2E3Q9Y5X4 410 aa24.63■■□□□ 1.53
SSNA1-201ENST00000322310 ZBTB7BO15156 539 aaPredicted RBP24.62■■□□□ 1.53
SSNA1-201ENST00000322310 FCGRTP55899 365 aa24.62■■□□□ 1.53
SSNA1-201ENST00000322310 DIXDC1Q155Q3 683 aa24.62■■□□□ 1.53
SSNA1-201ENST00000322310 CDC42EP5Q6NZY7 148 aa24.62■■□□□ 1.53
SSNA1-201ENST00000322310 DAGLAQ9Y4D2 1042 aa24.62■■□□□ 1.53
SSNA1-201ENST00000322310 FGFR2P21802 821 aa24.61■■□□□ 1.53
SSNA1-201ENST00000322310 PUM3Q15397 648 aaKnown RBP24.61■■□□□ 1.53
SSNA1-201ENST00000322310 NOL9Q5SY16 702 aaKnown RBP24.61■■□□□ 1.53
SSNA1-201ENST00000322310 SLAIN1Q8ND83 568 aa24.61■■□□□ 1.53
SSNA1-201ENST00000322310 IFIT1P09914 478 aaKnown RBP24.6■■□□□ 1.53
SSNA1-201ENST00000322310 FAM198AQ9UFP1 575 aa24.6■■□□□ 1.53
SSNA1-201ENST00000322310 LAMA3Q16787 3333 aa24.6■■□□□ 1.53
SSNA1-201ENST00000322310 KIF16BQ96L93 1317 aa24.6■■□□□ 1.53
SSNA1-201ENST00000322310 SGPL1O95470 568 aa24.59■■□□□ 1.53
SSNA1-201ENST00000322310 ELNP15502 786 aa24.59■■□□□ 1.53
SSNA1-201ENST00000322310 ZFPM1Q8IX07 1006 aa24.59■■□□□ 1.53
SSNA1-201ENST00000322310 SLC17A8Q8NDX2 589 aa24.59■■□□□ 1.53
SSNA1-201ENST00000322310 WDR66Q8TBY9 1149 aa24.59■■□□□ 1.53
SSNA1-201ENST00000322310 COL6A3P12111 3177 aa24.58■■□□□ 1.53
SSNA1-201ENST00000322310 DLL1O00548 723 aa24.58■■□□□ 1.53
SSNA1-201ENST00000322310 SOX1O00570 391 aaPredicted RBP24.58■■□□□ 1.53
SSNA1-201ENST00000322310 ADCY3O60266 1144 aa24.58■■□□□ 1.53
SSNA1-201ENST00000322310 PRDX5P30044 214 aa24.58■■□□□ 1.53
SSNA1-201ENST00000322310 MGAMO43451 1857 aa24.58■■□□□ 1.52
SSNA1-201ENST00000322310 CXCL11O14625 94 aa24.57■■□□□ 1.52
SSNA1-201ENST00000322310 ZEB1P37275 1124 aaPredicted RBP24.57■■□□□ 1.52
SSNA1-201ENST00000322310 FLT3LGP49771 235 aa24.57■■□□□ 1.52
SSNA1-201ENST00000322310 MRS2Q9HD23 443 aa24.57■■□□□ 1.52
SSNA1-201ENST00000322310 AK9Q5TCS8 1911 aa24.57■■□□□ 1.52
SSNA1-201ENST00000322310 INHAP05111 366 aa24.56■■□□□ 1.52
SSNA1-201ENST00000322310 USP40Q9NVE5 1235 aa24.56■■□□□ 1.52
SSNA1-201ENST00000322310 ZHX2Q9Y6X8 837 aa24.56■■□□□ 1.52
SSNA1-201ENST00000322310 ATRNL1Q5VV63 1379 aa24.55■■□□□ 1.52
SSNA1-201ENST00000322310 MYH13Q9UKX3 1938 aa24.55■■□□□ 1.52
SSNA1-201ENST00000322310 A0A0G2JLL6 359 aaPredicted RBP24.55■■□□□ 1.52
SSNA1-201ENST00000322310 EVI5O60447 810 aa24.55■■□□□ 1.52
SSNA1-201ENST00000322310 SLC5A1P13866 664 aa24.55■■□□□ 1.52
SSNA1-201ENST00000322310 GADL1Q6ZQY3 521 aa24.55■■□□□ 1.52
SSNA1-201ENST00000322310 PRRT2Q7Z6L0 340 aaPredicted RBP24.55■■□□□ 1.52
SSNA1-201ENST00000322310 LRCH3Q96II8 777 aa24.55■■□□□ 1.52
SSNA1-201ENST00000322310 DEFB118Q96PH6 123 aa24.55■■□□□ 1.52
SSNA1-201ENST00000322310 PHF20L1A8MW92 1017 aa24.54■■□□□ 1.52
SSNA1-201ENST00000322310 TFRCP02786 760 aaKnown RBP24.54■■□□□ 1.52
SSNA1-201ENST00000322310 LPIN2Q92539 896 aa24.54■■□□□ 1.52
SSNA1-201ENST00000322310 STAP2Q9UGK3 403 aa24.54■■□□□ 1.52
SSNA1-201ENST00000322310 FASTKD5Q7L8L6 764 aaKnown RBP24.53■■□□□ 1.52
SSNA1-201ENST00000322310 SCYL3Q8IZE3 742 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms