RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 OGFOD1Q8N543 542 aa16.31■□□□□ 0.2
PRPF18-201ENST00000320054 MIGA1Q8NAN2 632 aa16.31■□□□□ 0.2
PRPF18-201ENST00000320054 ZDHHC15Q96MV8 337 aa16.31■□□□□ 0.2
PRPF18-201ENST00000320054 DSCC1Q9BVC3 393 aa16.31■□□□□ 0.2
PRPF18-201ENST00000320054 USP26Q9BXU7 913 aa16.31■□□□□ 0.2
PRPF18-201ENST00000320054 ARMT1Q9H993 441 aa16.31■□□□□ 0.2
PRPF18-201ENST00000320054 UPF2Q9HAU5 1272 aaKnown RBP16.31■□□□□ 0.2
PRPF18-201ENST00000320054 LAMB1P07942 1786 aa16.31■□□□□ 0.2
PRPF18-201ENST00000320054 BTDP43251 543 aa16.3■□□□□ 0.2
PRPF18-201ENST00000320054 ZNF280AP59817 542 aaPredicted RBP16.3■□□□□ 0.2
PRPF18-201ENST00000320054 DYNLL1P63167 89 aaKnown RBP16.3■□□□□ 0.2
PRPF18-201ENST00000320054 LCORLQ8N3X6 602 aa16.3■□□□□ 0.2
PRPF18-201ENST00000320054 MTMR14Q8NCE2 650 aa16.3■□□□□ 0.2
PRPF18-201ENST00000320054 MAP4K1Q92918 833 aa16.3■□□□□ 0.2
PRPF18-201ENST00000320054 AATFQ9NY61 560 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRPF18-201ENST00000320054 GJA3Q9Y6H8 435 aa16.3■□□□□ 0.2
PRPF18-201ENST00000320054 SCN4AP35499 1836 aa16.3■□□□□ 0.2
PRPF18-201ENST00000320054 DDX60LQ5H9U9 1706 aaKnown RBP16.3■□□□□ 0.2
PRPF18-201ENST00000320054 PATL2C9JE40 543 aaKnown RBP16.29■□□□□ 0.2
PRPF18-201ENST00000320054 HSPD1P10809 573 aaKnown RBP16.29■□□□□ 0.2
PRPF18-201ENST00000320054 GMPSP49915 693 aaPredicted RBP16.29■□□□□ 0.2
PRPF18-201ENST00000320054 PTH1RQ03431 593 aa16.29■□□□□ 0.2
PRPF18-201ENST00000320054 CRNKL1Q9BZJ0 848 aaKnown RBP16.29■□□□□ 0.2
PRPF18-201ENST00000320054 ZMYM6O95789 1325 aa16.28■□□□□ 0.2
PRPF18-201ENST00000320054 FOXP2O15409 715 aa16.28■□□□□ 0.2
PRPF18-201ENST00000320054 RHBDL3P58872 404 aa16.28■□□□□ 0.2
PRPF18-201ENST00000320054 ALX1Q15699 326 aa16.28■□□□□ 0.2
PRPF18-201ENST00000320054 CFAP100Q494V2 611 aa16.28■□□□□ 0.2
PRPF18-201ENST00000320054 VPS53Q5VIR6 699 aa16.28■□□□□ 0.2
PRPF18-201ENST00000320054 APOBEC3HQ6NTF7 200 aaKnown RBP16.28■□□□□ 0.2
PRPF18-201ENST00000320054 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
PRPF18-201ENST00000320054 U3KPZ7 1027 aaPredicted RBP16.28■□□□□ 0.2
PRPF18-201ENST00000320054 SH3RF3Q8TEJ3 882 aaPredicted RBP16.27■□□□□ 0.2
PRPF18-201ENST00000320054 ATP8A2Q9NTI2 1148 aa16.27■□□□□ 0.2
PRPF18-201ENST00000320054 SLC4A4Q9Y6R1 1079 aa16.27■□□□□ 0.2
PRPF18-201ENST00000320054 WDR90Q96KV7 1748 aa16.27■□□□□ 0.19
PRPF18-201ENST00000320054 SPDYE2BA6NHP3 402 aa16.26■□□□□ 0.19
PRPF18-201ENST00000320054 GSG1L2A8MUP6 293 aa16.26■□□□□ 0.19
PRPF18-201ENST00000320054 SPDYE6P0CI01 402 aa16.26■□□□□ 0.19
PRPF18-201ENST00000320054 RBM5P52756 815 aaKnown RBP eCLIP16.26■□□□□ 0.19
PRPF18-201ENST00000320054 DLGAP5Q15398 846 aa16.26■□□□□ 0.19
PRPF18-201ENST00000320054 DPY19L2Q6NUT2 758 aa16.26■□□□□ 0.19
PRPF18-201ENST00000320054 CDC42EP5Q6NZY7 148 aa16.26■□□□□ 0.19
PRPF18-201ENST00000320054 ZBED3Q96IU2 234 aaPredicted RBP16.26■□□□□ 0.19
PRPF18-201ENST00000320054 NACAP1Q9BZK3 213 aa16.26■□□□□ 0.19
PRPF18-201ENST00000320054 MYOZ2Q9NPC6 264 aa16.26■□□□□ 0.19
PRPF18-201ENST00000320054 GPRC5DQ9NZD1 345 aa16.26■□□□□ 0.19
PRPF18-201ENST00000320054 CTNNA3Q9UI47 895 aa16.26■□□□□ 0.19
PRPF18-201ENST00000320054 CNOT7Q9UIV1 285 aaKnown RBP16.26■□□□□ 0.19
PRPF18-201ENST00000320054 RBM8AQ9Y5S9 174 aaKnown RBP16.26■□□□□ 0.19
PRPF18-201ENST00000320054 H7C1D1 291 aa16.25■□□□□ 0.19
PRPF18-201ENST00000320054 PRKAB2O43741 272 aa16.25■□□□□ 0.19
PRPF18-201ENST00000320054 DDNO94850 711 aaPredicted RBP16.25■□□□□ 0.19
PRPF18-201ENST00000320054 MCCP23508 829 aa16.25■□□□□ 0.19
PRPF18-201ENST00000320054 HSPA4P34932 840 aa16.25■□□□□ 0.19
PRPF18-201ENST00000320054 RBM25P49756 843 aaKnown RBP16.25■□□□□ 0.19
PRPF18-201ENST00000320054 NECTIN1Q15223 517 aa16.25■□□□□ 0.19
PRPF18-201ENST00000320054 MICALL2Q8IY33 904 aa16.25■□□□□ 0.19
PRPF18-201ENST00000320054 TEX11Q8IYF3 940 aa16.25■□□□□ 0.19
PRPF18-201ENST00000320054 IFNL3Q8IZI9 196 aa16.25■□□□□ 0.19
PRPF18-201ENST00000320054 L3MBTL3Q96JM7 780 aaPredicted RBP16.25■□□□□ 0.19
PRPF18-201ENST00000320054 PRMT6Q96LA8 375 aaPredicted RBP16.25■□□□□ 0.19
PRPF18-201ENST00000320054 TBC1D32Q96NH3 1257 aa16.25■□□□□ 0.19
PRPF18-201ENST00000320054 C22orf23Q9BZE7 217 aa16.25■□□□□ 0.19
PRPF18-201ENST00000320054 USP40Q9NVE5 1235 aa16.25■□□□□ 0.19
PRPF18-201ENST00000320054 GLTPD2A6NH11 291 aa16.24■□□□□ 0.19
PRPF18-201ENST00000320054 NPM3O75607 178 aaKnown RBP16.24■□□□□ 0.19
PRPF18-201ENST00000320054 FGAP02671 866 aa16.24■□□□□ 0.19
PRPF18-201ENST00000320054 APPP05067 770 aa16.24■□□□□ 0.19
PRPF18-201ENST00000320054 SDR42E1Q8WUS8 393 aa16.24■□□□□ 0.19
PRPF18-201ENST00000320054 KCNB2Q92953 911 aa16.24■□□□□ 0.19
PRPF18-201ENST00000320054 DDRGK1Q96HY6 314 aa16.24■□□□□ 0.19
PRPF18-201ENST00000320054 EPB41L4AQ9HCS5 686 aaPredicted RBP16.24■□□□□ 0.19
PRPF18-201ENST00000320054 MKRN1Q9UHC7 482 aaKnown RBP16.24■□□□□ 0.19
PRPF18-201ENST00000320054 PCDHAC2Q9Y5I4 1007 aa16.24■□□□□ 0.19
PRPF18-201ENST00000320054 MYH8P13535 1937 aa16.23■□□□□ 0.19
PRPF18-201ENST00000320054 USP5P45974 858 aa16.23■□□□□ 0.19
PRPF18-201ENST00000320054 ANAPC15P60006 121 aa16.23■□□□□ 0.19
PRPF18-201ENST00000320054 RNF20Q5VTR2 975 aa16.23■□□□□ 0.19
PRPF18-201ENST00000320054 IDI2Q9BXS1 227 aa16.23■□□□□ 0.19
PRPF18-201ENST00000320054 NAPBQ9H115 298 aa16.23■□□□□ 0.19
PRPF18-201ENST00000320054 DCP1AQ9NPI6 582 aaPredicted RBP16.23■□□□□ 0.19
PRPF18-201ENST00000320054 POLR2AP24928 1970 aaKnown RBP16.23■□□□□ 0.19
PRPF18-201ENST00000320054 SHTN1A0MZ66 631 aa16.22■□□□□ 0.19
PRPF18-201ENST00000320054 WDHD1O75717 1129 aaPredicted RBP16.22■□□□□ 0.19
PRPF18-201ENST00000320054 LMOD1P29536 600 aaPredicted RBP16.22■□□□□ 0.19
PRPF18-201ENST00000320054 TDO2P48775 406 aa16.22■□□□□ 0.19
PRPF18-201ENST00000320054 SPDYE2Q495Y8 402 aa16.22■□□□□ 0.19
PRPF18-201ENST00000320054 SBK1Q52WX2 424 aa16.22■□□□□ 0.19
PRPF18-201ENST00000320054 FKBP1CQ5VVH2 108 aa16.22■□□□□ 0.19
PRPF18-201ENST00000320054 CREB3L3Q68CJ9 461 aa16.22■□□□□ 0.19
PRPF18-201ENST00000320054 TGFBRAP1Q8WUH2 860 aa16.22■□□□□ 0.19
PRPF18-201ENST00000320054 IL17RAQ96F46 866 aa16.22■□□□□ 0.19
PRPF18-201ENST00000320054 TDRD3Q9H7E2 651 aaKnown RBP16.22■□□□□ 0.19
PRPF18-201ENST00000320054 COL2A1P02458 1487 aaPredicted RBP16.22■□□□□ 0.19
PRPF18-201ENST00000320054 FLT1P17948 1338 aa16.21■□□□□ 0.19
PRPF18-201ENST00000320054 WNT10BO00744 389 aa16.21■□□□□ 0.19
PRPF18-201ENST00000320054 SLC27A2O14975 620 aa16.21■□□□□ 0.19
PRPF18-201ENST00000320054 MYO1BO43795 1136 aa16.21■□□□□ 0.19
PRPF18-201ENST00000320054 IMMTQ16891 758 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms