RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 NSD2O96028 1365 aa13.58□□□□□ -0.24
FARP1-201ENST00000319562 ANKRD20A3Q5VUR7 823 aa13.57□□□□□ -0.24
FARP1-201ENST00000319562 SNRKQ9NRH2 765 aa13.57□□□□□ -0.24
FARP1-201ENST00000319562 ATAD2BQ9ULI0 1458 aa13.57□□□□□ -0.24
FARP1-201ENST00000319562 PAK2Q13177 524 aa13.57□□□□□ -0.24
FARP1-201ENST00000319562 DNAJC8O75937 253 aaPredicted RBP13.57□□□□□ -0.24
FARP1-201ENST00000319562 CNNM4Q6P4Q7 775 aa13.57□□□□□ -0.24
FARP1-201ENST00000319562 AFAP1Q8N556 730 aa13.57□□□□□ -0.24
FARP1-201ENST00000319562 SYCE1Q8N0S2 351 aa13.57□□□□□ -0.24
FARP1-201ENST00000319562 NOC4LQ9BVI4 516 aaKnown RBP13.57□□□□□ -0.24
FARP1-201ENST00000319562 LUC7L3O95232 432 aaKnown RBP13.57□□□□□ -0.24
FARP1-201ENST00000319562 TNFAIP3P21580 790 aa13.56□□□□□ -0.24
FARP1-201ENST00000319562 STX17P56962 302 aa13.56□□□□□ -0.24
FARP1-201ENST00000319562 IGSF22Q8N9C0 903 aa13.56□□□□□ -0.24
FARP1-201ENST00000319562 CYP7A1P22680 504 aa13.56□□□□□ -0.24
FARP1-201ENST00000319562 SV2BQ7L1I2 683 aa13.56□□□□□ -0.24
FARP1-201ENST00000319562 PPFIA3O75145 1194 aa13.56□□□□□ -0.24
FARP1-201ENST00000319562 PLCD3Q8N3E9 789 aa13.56□□□□□ -0.24
FARP1-201ENST00000319562 GPTP24298 496 aa13.56□□□□□ -0.24
FARP1-201ENST00000319562 CCT6AP40227 531 aaKnown RBP13.56□□□□□ -0.24
FARP1-201ENST00000319562 SLC4A8Q2Y0W8 1093 aa13.56□□□□□ -0.24
FARP1-201ENST00000319562 RHPN1Q8TCX5 695 aa13.56□□□□□ -0.24
FARP1-201ENST00000319562 ST5P78524 1137 aa13.56□□□□□ -0.24
FARP1-201ENST00000319562 FNBP1Q96RU3 617 aa13.56□□□□□ -0.24
FARP1-201ENST00000319562 NCAPD3P42695 1498 aa13.56□□□□□ -0.24
FARP1-201ENST00000319562 PLCD1P51178 756 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 PAXIP1Q6ZW49 1069 aaPredicted RBP13.55□□□□□ -0.24
FARP1-201ENST00000319562 RILPQ96NA2 401 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 IGSF3O75054 1194 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 CFAP221Q4G0U5 840 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 CALUO43852 315 aaPredicted RBP13.55□□□□□ -0.24
FARP1-201ENST00000319562 ASIC2Q16515 512 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 LRRC2Q9BYS8 371 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 THEGQ9P2T0 379 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 PPP4R1Q8TF05 950 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 IRX5P78411 483 aaPredicted RBP13.55□□□□□ -0.24
FARP1-201ENST00000319562 CCDC184Q52MB2 194 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 ARHGAP45Q92619 1136 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 ZRANB1Q9UGI0 708 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 DAPK3O43293 454 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 RNF40O75150 1001 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 SLC8A1P32418 973 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 GCKP35557 465 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 SMTNP53814 917 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 RAD50Q92878 1312 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 TMCO4Q5TGY1 634 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 MICAL1Q8TDZ2 1067 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 RAB17Q9H0T7 212 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 STK24Q9Y6E0 443 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 U2AF2P26368 475 aaKnown RBP eCLIP13.55□□□□□ -0.244e-7■■□□□ 12.9
FARP1-201ENST00000319562 COG7P83436 770 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 TBC1D8BQ0IIM8 1120 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 CCDC125Q86Z20 511 aa13.55□□□□□ -0.24
FARP1-201ENST00000319562 RBSNQ9H1K0 784 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 AFG3L2Q9Y4W6 797 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 WDR46O15213 610 aaKnown RBP13.54□□□□□ -0.24
FARP1-201ENST00000319562 OPHN1O60890 802 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 P3H4Q92791 437 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 TRAF5O00463 557 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 PPFIA4O75335 1185 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 TSHZ3Q63HK5 1081 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 LARSQ9P2J5 1176 aaKnown RBP13.54□□□□□ -0.24
FARP1-201ENST00000319562 SLC9C1Q4G0N8 1177 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 NAA16Q6N069 864 aaPredicted RBP13.54□□□□□ -0.24
FARP1-201ENST00000319562 SEPT10Q9P0V9 454 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 ASIC3Q9UHC3 531 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 CTNND2Q9UQB3 1225 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 HIP1RO75146 1068 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 PDE1AP54750 535 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 TROVE2P10155 538 aaKnown RBP eCLIP13.54□□□□□ -0.24
FARP1-201ENST00000319562 PLCG2P16885 1265 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 PI4KAP2A4QPH2 592 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 PI4KAP1Q8N8J0 262 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 RPGRIP1Q96KN7 1286 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 DDX21Q9NR30 783 aaKnown RBP eCLIP13.54□□□□□ -0.24
FARP1-201ENST00000319562 VTI1AQ96AJ9 217 aa13.54□□□□□ -0.24
FARP1-201ENST00000319562 TIAM1Q13009 1591 aa13.53□□□□□ -0.24
FARP1-201ENST00000319562 INPP1P49441 399 aa13.53□□□□□ -0.24
FARP1-201ENST00000319562 MAIP1Q8WWC4 291 aa13.53□□□□□ -0.24
FARP1-201ENST00000319562 SECISBP2LQ93073 1101 aaKnown RBP13.53□□□□□ -0.24
FARP1-201ENST00000319562 MYRIPQ8NFW9 859 aa13.53□□□□□ -0.24
FARP1-201ENST00000319562 POGZQ7Z3K3 1410 aa13.53□□□□□ -0.24
FARP1-201ENST00000319562 RUFY3Q7L099 469 aa13.53□□□□□ -0.24
FARP1-201ENST00000319562 BAIAP2L1Q9UHR4 511 aa13.53□□□□□ -0.24
FARP1-201ENST00000319562 TTC41PQ6P2S7 1318 aa13.53□□□□□ -0.24
FARP1-201ENST00000319562 KRT15P19012 456 aa13.53□□□□□ -0.24
FARP1-201ENST00000319562 DACT3Q96B18 629 aaPredicted RBP13.53□□□□□ -0.24
FARP1-201ENST00000319562 MAGEB6P1A0A0J9YX57 407 aa13.53□□□□□ -0.24
FARP1-201ENST00000319562 KRT9P35527 623 aa13.53□□□□□ -0.24
FARP1-201ENST00000319562 RPS6KA2Q15349 733 aa13.53□□□□□ -0.24
FARP1-201ENST00000319562 CCDC89Q8N998 374 aa13.53□□□□□ -0.24
FARP1-201ENST00000319562 ZBTB3Q9H5J0 574 aa13.53□□□□□ -0.24
FARP1-201ENST00000319562 SMIM24O75264 130 aa13.52□□□□□ -0.24
FARP1-201ENST00000319562 TMTC1Q8IUR5 882 aa13.52□□□□□ -0.24
FARP1-201ENST00000319562 KRT3P12035 628 aa13.52□□□□□ -0.24
FARP1-201ENST00000319562 SMC5Q8IY18 1101 aa13.52□□□□□ -0.24
FARP1-201ENST00000319562 NAIPQ13075 1403 aa13.52□□□□□ -0.24
FARP1-201ENST00000319562 ATP2B3Q16720 1220 aa13.52□□□□□ -0.24
FARP1-201ENST00000319562 HSP90AA5PQ58FG0 334 aa13.52□□□□□ -0.25
FARP1-201ENST00000319562 AP1ARQ63HQ0 302 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms