RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 FLAD1Q8NFF5 587 aa18.59■□□□□ 0.57
USH1C-202ENST00000318024 ANKIB1Q9P2G1 1089 aa18.59■□□□□ 0.57
USH1C-202ENST00000318024 TNS1Q9HBL0 1735 aaKnown RBP18.59■□□□□ 0.57
USH1C-202ENST00000318024 CASZ1Q86V15 1759 aa18.58■□□□□ 0.57
USH1C-202ENST00000318024 SLC27A2O14975 620 aa18.58■□□□□ 0.57
USH1C-202ENST00000318024 SLC15A2Q16348 729 aa18.58■□□□□ 0.57
USH1C-202ENST00000318024 CRY2Q49AN0 593 aa18.58■□□□□ 0.57
USH1C-202ENST00000318024 FERMT3Q86UX7 667 aa18.58■□□□□ 0.57
USH1C-202ENST00000318024 LEO1Q8WVC0 666 aaPredicted RBP18.58■□□□□ 0.57
USH1C-202ENST00000318024 FAM84BQ96KN1 310 aaPredicted RBP18.58■□□□□ 0.57
USH1C-202ENST00000318024 SCAND2PQ9GZW5 306 aaPredicted RBP18.58■□□□□ 0.57
USH1C-202ENST00000318024 PDCP20941 246 aa18.58■□□□□ 0.56
USH1C-202ENST00000318024 CKAP2LQ8IYA6 745 aa18.58■□□□□ 0.56
USH1C-202ENST00000318024 PGBD1Q96JS3 809 aa18.58■□□□□ 0.56
USH1C-202ENST00000318024 TNMDQ9H2S6 317 aa18.58■□□□□ 0.56
USH1C-202ENST00000318024 WWC3Q9ULE0 1092 aa18.58■□□□□ 0.56
USH1C-202ENST00000318024 SF3B2Q13435 895 aaKnown RBP18.57■□□□□ 0.56
USH1C-202ENST00000318024 TOB2Q14106 344 aaPredicted RBP18.57■□□□□ 0.56
USH1C-202ENST00000318024 TTF1Q15361 905 aaPredicted RBP18.57■□□□□ 0.56
USH1C-202ENST00000318024 CAVIN4Q5BKX8 364 aa18.57■□□□□ 0.56
USH1C-202ENST00000318024 TXNRD3Q86VQ6 643 aa18.57■□□□□ 0.56
USH1C-202ENST00000318024 ANKRD2Q9GZV1 360 aa18.57■□□□□ 0.56
USH1C-202ENST00000318024 OGFRQ9NZT2 677 aa18.57■□□□□ 0.56
USH1C-202ENST00000318024 ZKSCAN1P17029 563 aaPredicted RBP18.57■□□□□ 0.56
USH1C-202ENST00000318024 CDC25BP30305 580 aa18.57■□□□□ 0.56
USH1C-202ENST00000318024 CACTINQ8WUQ7 758 aaKnown RBP18.57■□□□□ 0.56
USH1C-202ENST00000318024 GPR101Q96P66 508 aaPredicted RBP18.57■□□□□ 0.56
USH1C-202ENST00000318024 PDGFDQ9GZP0 370 aaPredicted RBP18.57■□□□□ 0.56
USH1C-202ENST00000318024 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.57■□□□□ 0.56
USH1C-202ENST00000318024 PDE4CQ08493 712 aa18.56■□□□□ 0.56
USH1C-202ENST00000318024 LRRFIP1Q32MZ4 808 aaKnown RBP18.56■□□□□ 0.56
USH1C-202ENST00000318024 RBM17Q96I25 401 aaKnown RBP18.56■□□□□ 0.56
USH1C-202ENST00000318024 ZNF804BA4D1E1 1349 aa18.56■□□□□ 0.56
USH1C-202ENST00000318024 AKAP11Q9UKA4 1901 aa18.56■□□□□ 0.56
USH1C-202ENST00000318024 A0A0G2JLW4 131 aa18.55■□□□□ 0.56
USH1C-202ENST00000318024 ZFYP08048 801 aaPredicted RBP18.55■□□□□ 0.56
USH1C-202ENST00000318024 HSPD1P10809 573 aaKnown RBP18.55■□□□□ 0.56
USH1C-202ENST00000318024 ADD2P35612 726 aa18.55■□□□□ 0.56
USH1C-202ENST00000318024 CCDC144BQ3MJ40 725 aa18.55■□□□□ 0.56
USH1C-202ENST00000318024 TSGA10IPQ3SY00 556 aa18.55■□□□□ 0.56
USH1C-202ENST00000318024 CCDC144CPQ8IYA2 1237 aa18.55■□□□□ 0.56
USH1C-202ENST00000318024 STK32BQ9NY57 414 aa18.55■□□□□ 0.56
USH1C-202ENST00000318024 PARP3Q9Y6F1 533 aa18.55■□□□□ 0.56
USH1C-202ENST00000318024 ZNF532Q9HCE3 1301 aa18.55■□□□□ 0.56
USH1C-202ENST00000318024 NR1I2O75469 434 aa18.55■□□□□ 0.56
USH1C-202ENST00000318024 TNNT1P13805 278 aa18.55■□□□□ 0.56
USH1C-202ENST00000318024 PSMA5P28066 241 aa18.55■□□□□ 0.56
USH1C-202ENST00000318024 APPBP2Q92624 585 aa18.55■□□□□ 0.56
USH1C-202ENST00000318024 C16orf45Q96MC5 204 aaPredicted RBP18.55■□□□□ 0.56
USH1C-202ENST00000318024 ABCF2Q9UG63 623 aa18.55■□□□□ 0.56
USH1C-202ENST00000318024 RPS6KB1P23443 525 aa18.54■□□□□ 0.56
USH1C-202ENST00000318024 FGD1P98174 961 aa18.54■□□□□ 0.56
USH1C-202ENST00000318024 MAGEB6Q8N7X4 407 aa18.54■□□□□ 0.56
USH1C-202ENST00000318024 SPATA32Q96LK8 384 aa18.54■□□□□ 0.56
USH1C-202ENST00000318024 TFIP11Q9UBB9 837 aaKnown RBP18.54■□□□□ 0.56
USH1C-202ENST00000318024 DDX41Q9UJV9 622 aaKnown RBP18.54■□□□□ 0.56
USH1C-202ENST00000318024 JAG2Q9Y219 1238 aa18.54■□□□□ 0.56
USH1C-202ENST00000318024 PAXBP1Q9Y5B6 917 aa18.54■□□□□ 0.56
USH1C-202ENST00000318024 PDE6AP16499 860 aa18.54■□□□□ 0.56
USH1C-202ENST00000318024 IQCB1Q15051 598 aa18.54■□□□□ 0.56
USH1C-202ENST00000318024 SARM1Q6SZW1 724 aa18.54■□□□□ 0.56
USH1C-202ENST00000318024 TRIM5Q9C035 493 aa18.54■□□□□ 0.56
USH1C-202ENST00000318024 GNL3LQ9NVN8 582 aaKnown RBP18.54■□□□□ 0.56
USH1C-202ENST00000318024 CYP21A2P08686 494 aa18.53■□□□□ 0.56
USH1C-202ENST00000318024 BAG6P46379 1132 aa18.53■□□□□ 0.56
USH1C-202ENST00000318024 GPSM2P81274 684 aa18.53■□□□□ 0.56
USH1C-202ENST00000318024 ANKRD1Q15327 319 aa18.53■□□□□ 0.56
USH1C-202ENST00000318024 RNF20Q5VTR2 975 aa18.53■□□□□ 0.56
USH1C-202ENST00000318024 BRIP1Q9BX63 1249 aa18.53■□□□□ 0.56
USH1C-202ENST00000318024 LRP2BPQ9P2M1 347 aa18.53■□□□□ 0.56
USH1C-202ENST00000318024 GPAA1O43292 621 aa18.53■□□□□ 0.56
USH1C-202ENST00000318024 HIBADHP31937 336 aaKnown RBP18.53■□□□□ 0.56
USH1C-202ENST00000318024 ZNF165P49910 485 aa18.53■□□□□ 0.56
USH1C-202ENST00000318024 RESTQ13127 1097 aa18.53■□□□□ 0.56
USH1C-202ENST00000318024 NAA30Q147X3 362 aaPredicted RBP18.53■□□□□ 0.56
USH1C-202ENST00000318024 TTLL5Q6EMB2 1281 aa18.53■□□□□ 0.56
USH1C-202ENST00000318024 FBXO33Q7Z6M2 555 aa18.53■□□□□ 0.56
USH1C-202ENST00000318024 TCEANC2Q96MN5 208 aa18.53■□□□□ 0.56
USH1C-202ENST00000318024 MAP3K12Q12852 859 aa18.52■□□□□ 0.56
USH1C-202ENST00000318024 TICAM2Q86XR7 235 aa18.52■□□□□ 0.56
USH1C-202ENST00000318024 DNAJC25Q9H1X3 360 aa18.52■□□□□ 0.56
USH1C-202ENST00000318024 U3KPZ7 1027 aaPredicted RBP18.52■□□□□ 0.56
USH1C-202ENST00000318024 TCRBV5S4A2TA0A5A2 114 aa18.51■□□□□ 0.55
USH1C-202ENST00000318024 KLRG2A4D1S0 409 aaPredicted RBP18.51■□□□□ 0.55
USH1C-202ENST00000318024 FOXP2O15409 715 aa18.51■□□□□ 0.55
USH1C-202ENST00000318024 CAVIN2O95810 425 aa18.51■□□□□ 0.55
USH1C-202ENST00000318024 BLOC1S2Q6QNY1 142 aa18.51■□□□□ 0.55
USH1C-202ENST00000318024 MORC2Q9Y6X9 1032 aaPredicted RBP18.51■□□□□ 0.55
USH1C-202ENST00000318024 MYH15Q9Y2K3 1946 aa18.51■□□□□ 0.55
USH1C-202ENST00000318024 HOXA10P31260 410 aaPredicted RBP18.51■□□□□ 0.55
USH1C-202ENST00000318024 UBE3CQ15386 1083 aa18.51■□□□□ 0.55
USH1C-202ENST00000318024 OLFM4Q6UX06 510 aa18.51■□□□□ 0.55
USH1C-202ENST00000318024 DSCC1Q9BVC3 393 aa18.51■□□□□ 0.55
USH1C-202ENST00000318024 CGNQ9P2M7 1197 aaKnown RBP18.51■□□□□ 0.55
USH1C-202ENST00000318024 CLIP2Q9UDT6 1046 aa18.51■□□□□ 0.55
USH1C-202ENST00000318024 ARAP2Q8WZ64 1704 aa18.5■□□□□ 0.55
USH1C-202ENST00000318024 SRGNP10124 158 aa18.5■□□□□ 0.55
USH1C-202ENST00000318024 NYAP1Q6ZVC0 841 aa18.5■□□□□ 0.55
USH1C-202ENST00000318024 FAM53CQ9NYF3 392 aa18.5■□□□□ 0.55
USH1C-202ENST00000318024 COL1A1P02452 1464 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms