RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 ERCC6LQ2NKX8 1250 aa10.96□□□□□ -0.65
CAPN3-201ENST00000318023 LRRC24Q50LG9 513 aa10.96□□□□□ -0.65
CAPN3-201ENST00000318023 MUM1L1Q5H9M0 696 aa10.96□□□□□ -0.65
CAPN3-201ENST00000318023 CTR9Q6PD62 1173 aa10.96□□□□□ -0.65
CAPN3-201ENST00000318023 NIM1KQ8IY84 436 aa10.96□□□□□ -0.65
CAPN3-201ENST00000318023 C16orf71Q8IYS4 520 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-201ENST00000318023 TXLNBQ8N3L3 684 aa10.96□□□□□ -0.65
CAPN3-201ENST00000318023 ANKRD31Q8N7Z5 1873 aa10.96□□□□□ -0.65
CAPN3-201ENST00000318023 PNMA6AP0CW24 399 aaPredicted RBP10.96□□□□□ -0.66
CAPN3-201ENST00000318023 CASP7P55210 303 aa10.96□□□□□ -0.66
CAPN3-201ENST00000318023 TEX35Q5T0J7 233 aa10.96□□□□□ -0.66
CAPN3-201ENST00000318023 PACS2Q86VP3 889 aa10.96□□□□□ -0.66
CAPN3-201ENST00000318023 RRP15Q9Y3B9 282 aaKnown RBP10.96□□□□□ -0.66
CAPN3-201ENST00000318023 PTPRCP08575 1304 aa10.96□□□□□ -0.66
CAPN3-201ENST00000318023 CACNA1SQ13698 1873 aa10.96□□□□□ -0.66
CAPN3-201ENST00000318023 F8W031 263 aaPredicted RBP10.96□□□□□ -0.66
CAPN3-201ENST00000318023 IPO8O15397 1037 aaKnown RBP10.96□□□□□ -0.66
CAPN3-201ENST00000318023 LRRN4CLQ8ND94 238 aa10.96□□□□□ -0.66
CAPN3-201ENST00000318023 FAM212AQ96EL1 285 aa10.96□□□□□ -0.66
CAPN3-201ENST00000318023 MINPP1Q9UNW1 487 aa10.96□□□□□ -0.66
CAPN3-201ENST00000318023 COL4A1P02462 1669 aa10.95□□□□□ -0.66
CAPN3-201ENST00000318023 CLCN6P51797 869 aa10.95□□□□□ -0.66
CAPN3-201ENST00000318023 ZSCAN25Q6NSZ9 544 aa10.95□□□□□ -0.66
CAPN3-201ENST00000318023 SRLQ86TD4 932 aa10.95□□□□□ -0.66
CAPN3-201ENST00000318023 LUZP1Q86V48 1076 aa10.95□□□□□ -0.66
CAPN3-201ENST00000318023 TRMT1Q9NXH9 659 aaKnown RBP10.95□□□□□ -0.66
CAPN3-201ENST00000318023 GGA1Q9UJY5 639 aa10.95□□□□□ -0.66
CAPN3-201ENST00000318023 FIBPO43427 364 aa10.95□□□□□ -0.66
CAPN3-201ENST00000318023 DLK2Q6UY11 383 aa10.95□□□□□ -0.66
CAPN3-201ENST00000318023 SP8Q8IXZ3 490 aa10.95□□□□□ -0.66
CAPN3-201ENST00000318023 TBC1D16Q8TBP0 767 aa10.95□□□□□ -0.66
CAPN3-201ENST00000318023 COL11A2P13942 1736 aaPredicted RBP10.95□□□□□ -0.66
CAPN3-201ENST00000318023 EIF6P56537 245 aaKnown RBP10.94□□□□□ -0.66
CAPN3-201ENST00000318023 CHRNDQ07001 517 aa10.94□□□□□ -0.66
CAPN3-201ENST00000318023 GRM1Q13255 1194 aa10.94□□□□□ -0.66
CAPN3-201ENST00000318023 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-201ENST00000318023 ALDH1L1O75891 902 aa10.94□□□□□ -0.66
CAPN3-201ENST00000318023 HSP90B1P14625 803 aaKnown RBP10.94□□□□□ -0.66
CAPN3-201ENST00000318023 SOGA3Q5TF21 947 aa10.94□□□□□ -0.66
CAPN3-201ENST00000318023 ERO1AQ96HE7 468 aa10.94□□□□□ -0.66
CAPN3-201ENST00000318023 BRMS1Q9HCU9 246 aa10.94□□□□□ -0.66
CAPN3-201ENST00000318023 ANKRD65E5RJM6 399 aa10.93□□□□□ -0.66
CAPN3-201ENST00000318023 SRGAP3O43295 1099 aa10.93□□□□□ -0.66
CAPN3-201ENST00000318023 DTNBO60941 627 aa10.93□□□□□ -0.66
CAPN3-201ENST00000318023 TTC31Q49AM3 519 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-201ENST00000318023 GOLGA6L1Q8N7Z2 621 aa10.93□□□□□ -0.66
CAPN3-201ENST00000318023 CACTINQ8WUQ7 758 aaKnown RBP10.93□□□□□ -0.66
CAPN3-201ENST00000318023 BCORQ6W2J9 1755 aa10.93□□□□□ -0.66
CAPN3-201ENST00000318023 EPS15P42566 896 aa10.93□□□□□ -0.66
CAPN3-201ENST00000318023 CCT4P50991 539 aaKnown RBP10.93□□□□□ -0.66
CAPN3-201ENST00000318023 FMR1Q06787 632 aaKnown RBP eCLIP10.93□□□□□ -0.66
CAPN3-201ENST00000318023 CXCL9Q07325 125 aa10.93□□□□□ -0.66
CAPN3-201ENST00000318023 METTL24Q5JXM2 366 aa10.93□□□□□ -0.66
CAPN3-201ENST00000318023 FUCA2Q9BTY2 467 aa10.93□□□□□ -0.66
CAPN3-201ENST00000318023 ARID5BQ14865 1188 aa10.93□□□□□ -0.66
CAPN3-201ENST00000318023 GLTPD2A6NH11 291 aa10.92□□□□□ -0.66
CAPN3-201ENST00000318023 RGL2O15211 777 aa10.92□□□□□ -0.66
CAPN3-201ENST00000318023 GYG1P46976 350 aa10.92□□□□□ -0.66
CAPN3-201ENST00000318023 OS9Q13438 667 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-201ENST00000318023 PTPN14Q15678 1187 aa10.92□□□□□ -0.66
CAPN3-201ENST00000318023 ANKRD44Q8N8A2 993 aa10.92□□□□□ -0.66
CAPN3-201ENST00000318023 OTUD7AQ8TE49 926 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-201ENST00000318023 TRIM5Q9C035 493 aa10.92□□□□□ -0.66
CAPN3-201ENST00000318023 CDHR2Q9BYE9 1310 aa10.92□□□□□ -0.66
CAPN3-201ENST00000318023 A0A1B0GUL7 405 aa10.92□□□□□ -0.66
CAPN3-201ENST00000318023 YDJCA8MPS7 323 aa10.92□□□□□ -0.66
CAPN3-201ENST00000318023 SEC31AO94979 1220 aaKnown RBP10.92□□□□□ -0.66
CAPN3-201ENST00000318023 SLU7O95391 586 aaKnown RBP10.92□□□□□ -0.66
CAPN3-201ENST00000318023 SLFNL1Q499Z3 407 aa10.92□□□□□ -0.66
CAPN3-201ENST00000318023 CXorf56Q9H5V9 222 aa10.92□□□□□ -0.66
CAPN3-201ENST00000318023 ZNF408Q9H9D4 720 aa10.92□□□□□ -0.66
CAPN3-201ENST00000318023 ECE2O60344 883 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 H2AFXP16104 143 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-201ENST00000318023 LMAN1P49257 510 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 CCDC144BQ3MJ40 725 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 MAP1SQ66K74 1059 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-201ENST00000318023 INTS3Q68E01 1043 aaKnown RBP10.91□□□□□ -0.66
CAPN3-201ENST00000318023 SAMD7Q7Z3H4 446 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 EGFL6Q8IUX8 553 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 CCDC144CPQ8IYA2 1237 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 CCDC34Q96HJ3 373 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 ARFGEF2Q9Y6D5 1785 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 PNMA6EA0A0J9YXQ4 647 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 ATP2B1P20020 1258 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 TBC1D10BQ4KMP7 808 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-201ENST00000318023 VPS37DQ86XT2 251 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 PLEKHM2Q8IWE5 1019 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 DEF6Q9H4E7 631 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 CWC15Q9P013 229 aaKnown RBP10.91□□□□□ -0.66
CAPN3-201ENST00000318023 OAS2P29728 719 aaKnown RBP10.91□□□□□ -0.66
CAPN3-201ENST00000318023 GMPSP49915 693 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-201ENST00000318023 TPM4P67936 248 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 ARHGAP29Q52LW3 1261 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 GCC1Q96CN9 775 aa10.91□□□□□ -0.66
CAPN3-201ENST00000318023 BSDC1Q9NW68 430 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-201ENST00000318023 PSMD14O00487 310 aa10.9□□□□□ -0.66
CAPN3-201ENST00000318023 KIF3CO14782 793 aa10.9□□□□□ -0.66
CAPN3-201ENST00000318023 EGFRP00533 1210 aa10.9□□□□□ -0.66
CAPN3-201ENST00000318023 CSF1RP07333 972 aa10.9□□□□□ -0.66
CAPN3-201ENST00000318023 CT47B1P0C2W7 299 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms