RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 NCOA7Q8NI08 942 aa12.3□□□□□ -0.44
HNF4A-201ENST00000316099 MROH5Q6ZUA9 1318 aa12.3□□□□□ -0.44
HNF4A-201ENST00000316099 VPS36Q86VN1 386 aa12.3□□□□□ -0.44
HNF4A-201ENST00000316099 RAB11FIP4Q86YS3 637 aa12.3□□□□□ -0.44
HNF4A-201ENST00000316099 SYNE4Q8N205 404 aa12.3□□□□□ -0.44
HNF4A-201ENST00000316099 TFIP11Q9UBB9 837 aaKnown RBP12.3□□□□□ -0.44
HNF4A-201ENST00000316099 CACNA2D4Q7Z3S7 1137 aa12.29□□□□□ -0.44
HNF4A-201ENST00000316099 CYP7A1P22680 504 aa12.29□□□□□ -0.44
HNF4A-201ENST00000316099 ERVV-1B6SEH8 477 aa12.29□□□□□ -0.44
HNF4A-201ENST00000316099 HMGB2P26583 209 aaKnown RBP12.29□□□□□ -0.44
HNF4A-201ENST00000316099 FOXO4P98177 505 aa12.29□□□□□ -0.44
HNF4A-201ENST00000316099 SSRP1Q08945 709 aaKnown RBP12.29□□□□□ -0.44
HNF4A-201ENST00000316099 LPIN2Q92539 896 aa12.29□□□□□ -0.44
HNF4A-201ENST00000316099 CAMTA1Q9Y6Y1 1673 aa12.29□□□□□ -0.44
HNF4A-201ENST00000316099 F13A1P00488 732 aa12.29□□□□□ -0.44
HNF4A-201ENST00000316099 CCDC178Q5BJE1 867 aa12.29□□□□□ -0.44
HNF4A-201ENST00000316099 TMX1Q9H3N1 280 aa12.29□□□□□ -0.44
HNF4A-201ENST00000316099 GOLGA8BA8MQT2 603 aa12.29□□□□□ -0.44
HNF4A-201ENST00000316099 CEP112Q8N8E3 955 aa12.29□□□□□ -0.44
HNF4A-201ENST00000316099 KCNQ2O43526 872 aa12.28□□□□□ -0.44
HNF4A-201ENST00000316099 HSF2BPO75031 334 aa12.28□□□□□ -0.44
HNF4A-201ENST00000316099 CCDC175P0C221 793 aa12.28□□□□□ -0.44
HNF4A-201ENST00000316099 GUCY1B3Q02153 619 aa12.28□□□□□ -0.44
HNF4A-201ENST00000316099 RRAGDQ9NQL2 400 aaPredicted RBP12.28□□□□□ -0.44
HNF4A-201ENST00000316099 PPP1R12BO60237 982 aaPredicted RBP12.28□□□□□ -0.44
HNF4A-201ENST00000316099 RPS6KB1P23443 525 aa12.28□□□□□ -0.44
HNF4A-201ENST00000316099 CPLX3Q8WVH0 158 aa12.28□□□□□ -0.44
HNF4A-201ENST00000316099 SLC4A4Q9Y6R1 1079 aa12.28□□□□□ -0.44
HNF4A-201ENST00000316099 MNAT1P51948 309 aa12.28□□□□□ -0.44
HNF4A-201ENST00000316099 BBXQ8WY36 941 aaPredicted RBP12.28□□□□□ -0.44
HNF4A-201ENST00000316099 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.28□□□□□ -0.44
HNF4A-201ENST00000316099 INTS4Q96HW7 963 aaKnown RBP12.28□□□□□ -0.44
HNF4A-201ENST00000316099 SPECC1LQ69YQ0 1117 aa12.28□□□□□ -0.44
HNF4A-201ENST00000316099 FAM114A1Q8IWE2 563 aa12.28□□□□□ -0.44
HNF4A-201ENST00000316099 ISCA1Q9BUE6 129 aa12.28□□□□□ -0.44
HNF4A-201ENST00000316099 CTAGE15A4D2H0 777 aa12.27□□□□□ -0.44
HNF4A-201ENST00000316099 CTAGE8P0CG41 777 aa12.27□□□□□ -0.44
HNF4A-201ENST00000316099 CTAGE6Q86UF2 777 aa12.27□□□□□ -0.44
HNF4A-201ENST00000316099 CTAGE4Q8IX94 777 aa12.27□□□□□ -0.44
HNF4A-201ENST00000316099 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.27□□□□□ -0.442e-6■■■□□ 17.5
HNF4A-201ENST00000316099 USP5P45974 858 aa12.27□□□□□ -0.44
HNF4A-201ENST00000316099 USPL1Q5W0Q7 1092 aa12.27□□□□□ -0.44
HNF4A-201ENST00000316099 TICAM2Q86XR7 235 aa12.27□□□□□ -0.44
HNF4A-201ENST00000316099 MIGA1Q8NAN2 632 aa12.27□□□□□ -0.44
HNF4A-201ENST00000316099 GOLGA1Q92805 767 aa12.27□□□□□ -0.44
HNF4A-201ENST00000316099 CTAGE1Q96RT6 745 aa12.27□□□□□ -0.44
HNF4A-201ENST00000316099 QTRT2Q9H974 415 aaKnown RBP12.27□□□□□ -0.44
HNF4A-201ENST00000316099 RGPD5Q99666 1765 aa12.27□□□□□ -0.45
HNF4A-201ENST00000316099 SUSD4Q5VX71 490 aa12.27□□□□□ -0.45
HNF4A-201ENST00000316099 CCDC102BQ68D86 513 aa12.27□□□□□ -0.45
HNF4A-201ENST00000316099 DHX37Q8IY37 1157 aaKnown RBP12.27□□□□□ -0.45
HNF4A-201ENST00000316099 GPR108Q9NPR9 543 aa12.27□□□□□ -0.45
HNF4A-201ENST00000316099 BIN1O00499 593 aa12.27□□□□□ -0.45
HNF4A-201ENST00000316099 CCDC144CPQ8IYA2 1237 aa12.27□□□□□ -0.45
HNF4A-201ENST00000316099 TTC12Q9H892 705 aaPredicted RBP12.27□□□□□ -0.45
HNF4A-201ENST00000316099 TRPC5Q9UL62 973 aaPredicted RBP12.27□□□□□ -0.45
HNF4A-201ENST00000316099 C6orf229H3BNL8 230 aa12.27□□□□□ -0.45
HNF4A-201ENST00000316099 IFIT3O14879 490 aaKnown RBP12.27□□□□□ -0.45
HNF4A-201ENST00000316099 CETN2P41208 172 aa12.27□□□□□ -0.45
HNF4A-201ENST00000316099 UBASH3AP57075 661 aa12.27□□□□□ -0.45
HNF4A-201ENST00000316099 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.27□□□□□ -0.454e-6■■□□□ 12.8
HNF4A-201ENST00000316099 TFCP2L1Q9NZI6 479 aa12.27□□□□□ -0.45
HNF4A-201ENST00000316099 UTYO14607 1347 aa12.27□□□□□ -0.45
HNF4A-201ENST00000316099 KIF20AO95235 890 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 SSBP05455 408 aaKnown RBP eCLIP12.26□□□□□ -0.45
HNF4A-201ENST00000316099 NF2P35240 595 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 CCDC113Q9H0I3 377 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 DNAI1Q9UI46 699 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 SLC12A7Q9Y666 1083 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 DTNBO60941 627 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 APOBRQ0VD83 1088 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 APPBP2Q92624 585 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 MFSD6Q6ZSS7 791 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 ZNF589Q86UQ0 364 aaPredicted RBP12.26□□□□□ -0.45
HNF4A-201ENST00000316099 CNBD1Q8NA66 436 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 SEC31BQ9NQW1 1179 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 MARCH10Q8NA82 808 aaPredicted RBP12.26□□□□□ -0.45
HNF4A-201ENST00000316099 KCNG4Q8TDN1 519 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 JAG2Q9Y219 1238 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 GOLGA8AA7E2F4 631 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 RASEFQ8IZ41 740 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 SPATA5Q8NB90 893 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 TTLL11Q8NHH1 800 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 TAOK3Q9H2K8 898 aa12.26□□□□□ -0.45
HNF4A-201ENST00000316099 BCCIPQ9P287 314 aaKnown RBP eCLIP12.26□□□□□ -0.45
HNF4A-201ENST00000316099 GPAA1O43292 621 aa12.25□□□□□ -0.45
HNF4A-201ENST00000316099 RANBP6O60518 1105 aaKnown RBP12.25□□□□□ -0.45
HNF4A-201ENST00000316099 TMEM67Q5HYA8 995 aa12.25□□□□□ -0.45
HNF4A-201ENST00000316099 DHX32Q7L7V1 743 aaKnown RBP12.25□□□□□ -0.45
HNF4A-201ENST00000316099 SPATA31A5Q5VU36 1347 aa12.25□□□□□ -0.45
HNF4A-201ENST00000316099 SPATA31A7Q8IWB4 1347 aa12.25□□□□□ -0.45
HNF4A-201ENST00000316099 OPA1O60313 960 aa12.25□□□□□ -0.45
HNF4A-201ENST00000316099 TYRO3Q06418 890 aa12.25□□□□□ -0.45
HNF4A-201ENST00000316099 KLF18A0A0U1RQI7 1052 aa12.25□□□□□ -0.45
HNF4A-201ENST00000316099 RABL6Q3YEC7 729 aaPredicted RBP12.25□□□□□ -0.45
HNF4A-201ENST00000316099 RSPH14Q9UHP6 348 aa12.25□□□□□ -0.45
HNF4A-201ENST00000316099 V9GYY5 206 aaPredicted RBP12.25□□□□□ -0.45
HNF4A-201ENST00000316099 JCADQ9P266 1359 aa12.25□□□□□ -0.45
HNF4A-201ENST00000316099 NAA16Q6N069 864 aaPredicted RBP12.25□□□□□ -0.45
HNF4A-201ENST00000316099 MAATS1Q7Z4T9 603 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms