RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 RTL9Q8NET4 1388 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 KRT2P35908 639 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 ZNF174Q15697 407 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 ESYT1Q9BSJ8 1104 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 HMG20BQ9P0W2 317 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 XDHP47989 1333 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 ADGRL2O95490 1459 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 SASH1O94885 1247 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 NPR1P16066 1061 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 IL6STP40189 918 aaPredicted RBP10.29□□□□□ -0.76
CTC1-201ENST00000315684 SYNE4Q8N205 404 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 MASTLQ96GX5 879 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 ABCC3O15438 1527 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 PTPRTO14522 1441 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 TERF1P54274 439 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 STXBP4Q6ZWJ1 553 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 ATG3Q9NT62 314 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 ARHGEF5Q12774 1597 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 USP17L12C9JPN9 530 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 USP17L21D6R901 530 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 MBD3O95983 291 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 RAD51AP2Q09MP3 1159 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 CREB3L3Q68CJ9 461 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 ZNF397Q8NF99 534 aaPredicted RBP10.29□□□□□ -0.76
CTC1-201ENST00000315684 ANO3Q9BYT9 981 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 NCAPH2Q6IBW4 605 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 GLG1Q92896 1179 aa10.29□□□□□ -0.76
CTC1-201ENST00000315684 SOS1Q07889 1333 aaPredicted RBP10.28□□□□□ -0.76
CTC1-201ENST00000315684 CAMSAP1Q5T5Y3 1602 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 M0QZ92 97 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 DHX58Q96C10 678 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 MLXIPQ9HAP2 919 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 PRDM15P57071 1507 aaPredicted RBP10.28□□□□□ -0.76
CTC1-201ENST00000315684 GJC1P36383 396 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 UBXN2AP68543 259 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 LRSAM1Q6UWE0 723 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 NBPF3Q9H094 633 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 MRVI1Q9Y6F6 885 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 CEP152O94986 1710 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 STX6O43752 255 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 PHKA1P46020 1223 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 ASIC1P78348 528 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 CENPHQ9H3R5 247 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 AZI2Q9H6S1 392 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 PALD1Q9ULE6 856 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 BACH2Q9BYV9 841 aa10.28□□□□□ -0.76
CTC1-201ENST00000315684 SYCE3A1L190 88 aa10.27□□□□□ -0.76
CTC1-201ENST00000315684 A2ML1A8K2U0 1454 aa10.27□□□□□ -0.76
CTC1-201ENST00000315684 LPXNO60711 386 aa10.27□□□□□ -0.76
CTC1-201ENST00000315684 LUC7LQ9NQ29 371 aaKnown RBP10.27□□□□□ -0.76
CTC1-201ENST00000315684 V9GY48 417 aaPredicted RBP10.27□□□□□ -0.76
CTC1-201ENST00000315684 CCDC102BQ68D86 513 aa10.27□□□□□ -0.76
CTC1-201ENST00000315684 SLC5A4Q9NY91 659 aa10.27□□□□□ -0.76
CTC1-201ENST00000315684 USP17L3A6NCW0 530 aa10.27□□□□□ -0.77
CTC1-201ENST00000315684 USP17L4A6NCW7 530 aa10.27□□□□□ -0.77
CTC1-201ENST00000315684 RBM25P49756 843 aaKnown RBP10.27□□□□□ -0.77
CTC1-201ENST00000315684 USP17L1Q7RTZ2 530 aa10.27□□□□□ -0.77
CTC1-201ENST00000315684 RTKN2Q8IZC4 609 aa10.27□□□□□ -0.77
CTC1-201ENST00000315684 TRPC6Q9Y210 931 aa10.27□□□□□ -0.77
CTC1-201ENST00000315684 SNAP25P60880 206 aa10.27□□□□□ -0.77
CTC1-201ENST00000315684 SUPT20HL1Q3ZLR7 823 aa10.27□□□□□ -0.77
CTC1-201ENST00000315684 CTNNA2P26232 953 aa10.27□□□□□ -0.77
CTC1-201ENST00000315684 DYNLL1P63167 89 aaKnown RBP10.27□□□□□ -0.77
CTC1-201ENST00000315684 CETN1Q12798 172 aa10.27□□□□□ -0.77
CTC1-201ENST00000315684 PPP1R16BQ96T49 567 aa10.27□□□□□ -0.77
CTC1-201ENST00000315684 NUP88Q99567 741 aaPredicted RBP10.27□□□□□ -0.77
CTC1-201ENST00000315684 CYP27B1O15528 508 aa10.27□□□□□ -0.77
CTC1-201ENST00000315684 SSFA2P28290 1259 aa10.27□□□□□ -0.77
CTC1-201ENST00000315684 PARD3Q8TEW0 1356 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 PLXNC1O60486 1568 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 SNAP23O00161 211 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 OSBPP22059 807 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 ARID5AQ03989 594 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 MAP3K11Q16584 847 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 PIK3AP1Q6ZUJ8 805 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 NCOA5Q9HCD5 579 aaKnown RBP10.26□□□□□ -0.77
CTC1-201ENST00000315684 PTPRMP28827 1452 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 COMMD10Q9Y6G5 202 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 ABCB5Q2M3G0 1257 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 RRAGBQ5VZM2 374 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 RPS6KA4O75676 772 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 TRIM47Q96LD4 638 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 ERCC3P19447 782 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 TXKP42681 527 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 SEPT14Q6ZU15 432 aa10.26□□□□□ -0.77
CTC1-201ENST00000315684 TNS3Q68CZ2 1445 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 ANKARQ7Z5J8 1434 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 NKX1-1Q15270 411 aaPredicted RBP10.25□□□□□ -0.77
CTC1-201ENST00000315684 ZMYND15Q9H091 742 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 PCCAP05165 728 aaPredicted RBP10.25□□□□□ -0.77
CTC1-201ENST00000315684 GNA11P29992 359 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 SEPT7Q16181 437 aaKnown RBP10.25□□□□□ -0.77
CTC1-201ENST00000315684 KRT79Q5XKE5 535 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 PHKBQ93100 1093 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 SPATA31A6Q5VVP1 1343 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 EPB41L2O43491 1005 aaKnown RBP10.25□□□□□ -0.77
CTC1-201ENST00000315684 IREB2P48200 963 aaKnown RBP10.25□□□□□ -0.77
CTC1-201ENST00000315684 ICA1Q05084 483 aa10.25□□□□□ -0.77
CTC1-201ENST00000315684 PABPC4Q13310 644 aaKnown RBP eCLIP10.25□□□□□ -0.771e-38■■□□□ 12.2
CTC1-201ENST00000315684 TAF3Q5VWG9 929 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms