RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 GOLGA8BA8MQT2 603 aa17.37■□□□□ 0.37
CHFR-202ENST00000315585 SF3A1Q15459 793 aaKnown RBP17.37■□□□□ 0.37
CHFR-202ENST00000315585 ZNF772Q68DY9 489 aaPredicted RBP17.37■□□□□ 0.37
CHFR-202ENST00000315585 SYNE3Q6ZMZ3 975 aa17.37■□□□□ 0.37
CHFR-202ENST00000315585 DRC7Q8IY82 874 aa17.37■□□□□ 0.37
CHFR-202ENST00000315585 HELBQ8NG08 1087 aaPredicted RBP17.37■□□□□ 0.37
CHFR-202ENST00000315585 USP28Q96RU2 1077 aa17.37■□□□□ 0.37
CHFR-202ENST00000315585 CEBPZQ03701 1054 aaKnown RBP17.36■□□□□ 0.37
CHFR-202ENST00000315585 CHRNDQ07001 517 aa17.36■□□□□ 0.37
CHFR-202ENST00000315585 ZRSR1Q15695 479 aaKnown RBP17.36■□□□□ 0.37
CHFR-202ENST00000315585 CHST3Q7LGC8 479 aa17.36■□□□□ 0.37
CHFR-202ENST00000315585 FBXO18Q8NFZ0 1043 aa17.36■□□□□ 0.37
CHFR-202ENST00000315585 TMEM87BQ96K49 555 aa17.36■□□□□ 0.37
CHFR-202ENST00000315585 POLR3EQ9NVU0 708 aa17.36■□□□□ 0.37
CHFR-202ENST00000315585 ORC3Q9UBD5 711 aaPredicted RBP17.36■□□□□ 0.37
CHFR-202ENST00000315585 CDC25BP30305 580 aa17.36■□□□□ 0.37
CHFR-202ENST00000315585 PHKA1P46020 1223 aa17.36■□□□□ 0.37
CHFR-202ENST00000315585 HAND2P61296 217 aa17.36■□□□□ 0.37
CHFR-202ENST00000315585 KIAA1524Q8TCG1 905 aa17.36■□□□□ 0.37
CHFR-202ENST00000315585 MRPS27Q92552 414 aaKnown RBP17.36■□□□□ 0.37
CHFR-202ENST00000315585 ANGEL1Q9UNK9 670 aaKnown RBP17.36■□□□□ 0.37
CHFR-202ENST00000315585 BECN2A8MW95 431 aa17.35■□□□□ 0.37
CHFR-202ENST00000315585 NPHP1O15259 732 aa17.35■□□□□ 0.37
CHFR-202ENST00000315585 SARM1Q6SZW1 724 aa17.35■□□□□ 0.37
CHFR-202ENST00000315585 ZNF830Q96NB3 372 aaPredicted RBP17.35■□□□□ 0.37
CHFR-202ENST00000315585 ZMYM6O95789 1325 aa17.35■□□□□ 0.37
CHFR-202ENST00000315585 UBE4AQ14139 1066 aa17.35■□□□□ 0.37
CHFR-202ENST00000315585 STK38Q15208 465 aa17.35■□□□□ 0.37
CHFR-202ENST00000315585 ALX1Q15699 326 aa17.35■□□□□ 0.37
CHFR-202ENST00000315585 PLA2G4DQ86XP0 818 aa17.35■□□□□ 0.37
CHFR-202ENST00000315585 GNL3LQ9NVN8 582 aaKnown RBP17.35■□□□□ 0.37
CHFR-202ENST00000315585 NEMFO60524 1076 aa17.34■□□□□ 0.37
CHFR-202ENST00000315585 APPP05067 770 aa17.34■□□□□ 0.37
CHFR-202ENST00000315585 FDPSP14324 419 aaKnown RBP17.34■□□□□ 0.37
CHFR-202ENST00000315585 MAP3K12Q12852 859 aa17.34■□□□□ 0.37
CHFR-202ENST00000315585 FSIP1Q8NA03 581 aa17.34■□□□□ 0.37
CHFR-202ENST00000315585 SPATA5Q8NB90 893 aa17.34■□□□□ 0.37
CHFR-202ENST00000315585 DNAJC25Q9H1X3 360 aa17.34■□□□□ 0.37
CHFR-202ENST00000315585 MYH7P12883 1935 aa17.34■□□□□ 0.37
CHFR-202ENST00000315585 AKAP11Q9UKA4 1901 aa17.34■□□□□ 0.37
CHFR-202ENST00000315585 MYH15Q9Y2K3 1946 aa17.34■□□□□ 0.37
CHFR-202ENST00000315585 FOXP2O15409 715 aa17.33■□□□□ 0.37
CHFR-202ENST00000315585 IDH1O75874 414 aaKnown RBP17.33■□□□□ 0.37
CHFR-202ENST00000315585 ZNF75DP51815 510 aa17.33■□□□□ 0.37
CHFR-202ENST00000315585 CEP57L1Q8IYX8 460 aa17.33■□□□□ 0.37
CHFR-202ENST00000315585 SPC24Q8NBT2 197 aa17.33■□□□□ 0.37
CHFR-202ENST00000315585 AIDAQ96BJ3 306 aa17.33■□□□□ 0.37
CHFR-202ENST00000315585 AP5Z1O43299 807 aa17.33■□□□□ 0.36
CHFR-202ENST00000315585 RBM6P78332 1123 aaKnown RBP17.33■□□□□ 0.36
CHFR-202ENST00000315585 SNW1Q13573 536 aaKnown RBP17.33■□□□□ 0.36
CHFR-202ENST00000315585 DHX8Q14562 1220 aaKnown RBP17.33■□□□□ 0.36
CHFR-202ENST00000315585 ENGASEQ8NFI3 743 aa17.33■□□□□ 0.36
CHFR-202ENST00000315585 MYRIPQ8NFW9 859 aa17.33■□□□□ 0.36
CHFR-202ENST00000315585 SDF4Q9BRK5 362 aa17.33■□□□□ 0.36
CHFR-202ENST00000315585 CNNM2Q9H8M5 875 aa17.33■□□□□ 0.36
CHFR-202ENST00000315585 GNAT2P19087 354 aa17.32■□□□□ 0.36
CHFR-202ENST00000315585 JMYQ8N9B5 988 aa17.32■□□□□ 0.36
CHFR-202ENST00000315585 LINC00301Q8NCQ3 95 aa17.32■□□□□ 0.36
CHFR-202ENST00000315585 C4AP0C0L4 1744 aa17.32■□□□□ 0.36
CHFR-202ENST00000315585 A0A0G2JLW4 131 aa17.32■□□□□ 0.36
CHFR-202ENST00000315585 PI16Q6UXB8 463 aa17.32■□□□□ 0.36
CHFR-202ENST00000315585 ANKRD2Q9GZV1 360 aa17.32■□□□□ 0.36
CHFR-202ENST00000315585 METAP2P50579 478 aaKnown RBP eCLIP17.31■□□□□ 0.36
CHFR-202ENST00000315585 FOSBP53539 338 aa17.31■□□□□ 0.36
CHFR-202ENST00000315585 RPS8P62241 208 aaKnown RBP17.31■□□□□ 0.36
CHFR-202ENST00000315585 MRFAP1L1Q96HT8 127 aa17.31■□□□□ 0.36
CHFR-202ENST00000315585 PCDHA7Q9UN72 937 aa17.31■□□□□ 0.36
CHFR-202ENST00000315585 HPS5Q9UPZ3 1129 aa17.31■□□□□ 0.36
CHFR-202ENST00000315585 SPTLC2O15270 562 aa17.31■□□□□ 0.36
CHFR-202ENST00000315585 PDE6AP16499 860 aa17.31■□□□□ 0.36
CHFR-202ENST00000315585 GUCY1B3Q02153 619 aa17.31■□□□□ 0.36
CHFR-202ENST00000315585 CAVIN4Q5BKX8 364 aa17.31■□□□□ 0.36
CHFR-202ENST00000315585 MYSM1Q5VVJ2 828 aa17.31■□□□□ 0.36
CHFR-202ENST00000315585 SMIM5Q71RC9 77 aa17.31■□□□□ 0.36
CHFR-202ENST00000315585 NACAP1Q9BZK3 213 aa17.31■□□□□ 0.36
CHFR-202ENST00000315585 LRRC4BQ9NT99 713 aa17.31■□□□□ 0.36
CHFR-202ENST00000315585 ZNF532Q9HCE3 1301 aa17.31■□□□□ 0.36
CHFR-202ENST00000315585 PATL2C9JE40 543 aaKnown RBP17.3■□□□□ 0.36
CHFR-202ENST00000315585 ANTXR2P58335 489 aa17.3■□□□□ 0.36
CHFR-202ENST00000315585 TPM4P67936 248 aa17.3■□□□□ 0.36
CHFR-202ENST00000315585 TRIM29Q14134 588 aa17.3■□□□□ 0.36
CHFR-202ENST00000315585 WASF1Q92558 559 aa17.3■□□□□ 0.36
CHFR-202ENST00000315585 MTA3Q9BTC8 594 aa17.3■□□□□ 0.36
CHFR-202ENST00000315585 PIH1D3Q9NQM4 214 aaKnown RBP17.3■□□□□ 0.36
CHFR-202ENST00000315585 CLIP2Q9UDT6 1046 aa17.3■□□□□ 0.36
CHFR-202ENST00000315585 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.3■□□□□ 0.36
CHFR-202ENST00000315585 RASGRF1Q13972 1273 aa17.3■□□□□ 0.36
CHFR-202ENST00000315585 IQCB1Q15051 598 aa17.3■□□□□ 0.36
CHFR-202ENST00000315585 C3orf67Q6ZVT6 689 aa17.3■□□□□ 0.36
CHFR-202ENST00000315585 FMR1NBQ8N0W7 255 aaPredicted RBP17.3■□□□□ 0.36
CHFR-202ENST00000315585 MPNDQ8N594 471 aa17.3■□□□□ 0.36
CHFR-202ENST00000315585 KRT23Q9C075 422 aa17.3■□□□□ 0.36
CHFR-202ENST00000315585 MINPP1Q9UNW1 487 aa17.3■□□□□ 0.36
CHFR-202ENST00000315585 BRWD3Q6RI45 1802 aa17.29■□□□□ 0.36
CHFR-202ENST00000315585 CASZ1Q86V15 1759 aa17.29■□□□□ 0.36
CHFR-202ENST00000315585 TRIM37O94972 964 aa17.29■□□□□ 0.36
CHFR-202ENST00000315585 LIFRP42702 1097 aa17.29■□□□□ 0.36
CHFR-202ENST00000315585 CCDC186Q7Z3E2 898 aa17.29■□□□□ 0.36
CHFR-202ENST00000315585 ILDR1Q86SU0 546 aaPredicted RBP17.29■□□□□ 0.36
CHFR-202ENST00000315585 STRBPQ96SI9 672 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms