RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 MBD4O95243 580 aa29.59■■■□□ 2.33
CDPF1-201ENST00000314567 DACT2Q5SW24 774 aa29.59■■■□□ 2.33
CDPF1-201ENST00000314567 TBC1D22AQ8WUA7 517 aa29.59■■■□□ 2.33
CDPF1-201ENST00000314567 ZSCAN31Q96LW9 406 aaPredicted RBP29.59■■■□□ 2.33
CDPF1-201ENST00000314567 MYH2Q9UKX2 1941 aa29.58■■■□□ 2.33
CDPF1-201ENST00000314567 USP17L3A6NCW0 530 aa29.58■■■□□ 2.33
CDPF1-201ENST00000314567 USP17L4A6NCW7 530 aa29.58■■■□□ 2.33
CDPF1-201ENST00000314567 FOXP2O15409 715 aa29.58■■■□□ 2.33
CDPF1-201ENST00000314567 MCM4P33991 863 aa29.58■■■□□ 2.33
CDPF1-201ENST00000314567 DYNLL1P63167 89 aaKnown RBP29.58■■■□□ 2.33
CDPF1-201ENST00000314567 USP17L1Q7RTZ2 530 aa29.58■■■□□ 2.33
CDPF1-201ENST00000314567 NIM1KQ8IY84 436 aa29.58■■■□□ 2.33
CDPF1-201ENST00000314567 LCORLQ8N3X6 602 aa29.58■■■□□ 2.33
CDPF1-201ENST00000314567 GBP4Q96PP9 640 aa29.58■■■□□ 2.33
CDPF1-201ENST00000314567 ANKRD1Q15327 319 aa29.57■■■□□ 2.32
CDPF1-201ENST00000314567 STRIP1Q5VSL9 837 aa29.57■■■□□ 2.32
CDPF1-201ENST00000314567 CYP21A2P08686 494 aa29.57■■■□□ 2.32
CDPF1-201ENST00000314567 RPS6KB1P23443 525 aa29.57■■■□□ 2.32
CDPF1-201ENST00000314567 AIDAQ96BJ3 306 aa29.57■■■□□ 2.32
CDPF1-201ENST00000314567 SH2B1Q9NRF2 756 aaPredicted RBP29.57■■■□□ 2.32
CDPF1-201ENST00000314567 ADAMTSL1Q8N6G6 1762 aa29.56■■■□□ 2.32
CDPF1-201ENST00000314567 CPA1P15085 419 aa29.56■■■□□ 2.32
CDPF1-201ENST00000314567 LTBP3Q9NS15 1303 aa29.56■■■□□ 2.32
CDPF1-201ENST00000314567 VPS33BQ9H267 617 aa29.55■■■□□ 2.32
CDPF1-201ENST00000314567 CTNNA3Q9UI47 895 aa29.55■■■□□ 2.32
CDPF1-201ENST00000314567 PSME4Q14997 1843 aa29.55■■■□□ 2.32
CDPF1-201ENST00000314567 PRKAB2O43741 272 aa29.55■■■□□ 2.32
CDPF1-201ENST00000314567 SCNN1DP51172 638 aa29.55■■■□□ 2.32
CDPF1-201ENST00000314567 NEK1Q96PY6 1258 aa29.55■■■□□ 2.32
CDPF1-201ENST00000314567 STRBPQ96SI9 672 aaKnown RBP29.55■■■□□ 2.32
CDPF1-201ENST00000314567 AATFQ9NY61 560 aaKnown RBP eCLIP29.55■■■□□ 2.32
CDPF1-201ENST00000314567 ZNRF3Q9ULT6 936 aa29.55■■■□□ 2.32
CDPF1-201ENST00000314567 DDX11L8A8MPP1 907 aa29.54■■■□□ 2.32
CDPF1-201ENST00000314567 PSMD14O00487 310 aa29.54■■■□□ 2.32
CDPF1-201ENST00000314567 CLEC17AQ6ZS10 378 aa29.54■■■□□ 2.32
CDPF1-201ENST00000314567 KIAA0825Q8IV33 1275 aa29.54■■■□□ 2.32
CDPF1-201ENST00000314567 TTF2Q9UNY4 1162 aaKnown RBP29.54■■■□□ 2.32
CDPF1-201ENST00000314567 TAF6LQ9Y6J9 622 aa29.54■■■□□ 2.32
CDPF1-201ENST00000314567 LAMA4Q16363 1823 aa29.54■■■□□ 2.32
CDPF1-201ENST00000314567 MAGEB6P1A0A0J9YX57 407 aa29.53■■■□□ 2.32
CDPF1-201ENST00000314567 HMGB1P09429 215 aaKnown RBP29.53■■■□□ 2.32
CDPF1-201ENST00000314567 RIOK1Q9BRS2 568 aaKnown RBP29.53■■■□□ 2.32
CDPF1-201ENST00000314567 JDP2Q8WYK2 163 aa29.53■■■□□ 2.32
CDPF1-201ENST00000314567 ZBTB12Q9Y330 459 aaPredicted RBP29.52■■■□□ 2.32
CDPF1-201ENST00000314567 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.52■■■□□ 2.32
CDPF1-201ENST00000314567 CXCL9Q07325 125 aa29.51■■■□□ 2.31
CDPF1-201ENST00000314567 PTMSP20962 102 aa29.5■■■□□ 2.31
CDPF1-201ENST00000314567 PCDHAC2Q9Y5I4 1007 aa29.5■■■□□ 2.31
CDPF1-201ENST00000314567 MROH7-TTC4A0A0A0MT08 1334 aa29.5■■■□□ 2.31
CDPF1-201ENST00000314567 SBF1O95248 1867 aa29.5■■■□□ 2.31
CDPF1-201ENST00000314567 SDR42E1Q8WUS8 393 aa29.49■■■□□ 2.31
CDPF1-201ENST00000314567 APPP05067 770 aa29.48■■■□□ 2.31
CDPF1-201ENST00000314567 GSTO1P78417 241 aa29.48■■■□□ 2.31
CDPF1-201ENST00000314567 SLC4A4Q9Y6R1 1079 aa29.48■■■□□ 2.31
CDPF1-201ENST00000314567 EPB41L4AQ9HCS5 686 aaPredicted RBP29.48■■■□□ 2.31
CDPF1-201ENST00000314567 VIL1P09327 827 aaKnown RBP29.47■■■□□ 2.31
CDPF1-201ENST00000314567 IMMTQ16891 758 aaKnown RBP29.47■■■□□ 2.31
CDPF1-201ENST00000314567 RSBN1LQ6PCB5 846 aaPredicted RBP29.47■■■□□ 2.31
CDPF1-201ENST00000314567 SUGT1Q9Y2Z0 365 aa29.47■■■□□ 2.31
CDPF1-201ENST00000314567 GSG1L2A8MUP6 293 aa29.46■■■□□ 2.31
CDPF1-201ENST00000314567 BTDP43251 543 aa29.46■■■□□ 2.31
CDPF1-201ENST00000314567 FKBP1AP62942 108 aaKnown RBP29.46■■■□□ 2.31
CDPF1-201ENST00000314567 DAGLAQ9Y4D2 1042 aa29.46■■■□□ 2.31
CDPF1-201ENST00000314567 FGAP02671 866 aa29.46■■■□□ 2.31
CDPF1-201ENST00000314567 STOX1Q6ZVD7 989 aa29.46■■■□□ 2.31
CDPF1-201ENST00000314567 SH3RF3Q8TEJ3 882 aaPredicted RBP29.46■■■□□ 2.31
CDPF1-201ENST00000314567 E7EWF7 191 aa29.44■■■□□ 2.3
CDPF1-201ENST00000314567 LARGE1O95461 756 aa29.44■■■□□ 2.3
CDPF1-201ENST00000314567 LDHCP07864 332 aa29.44■■■□□ 2.3
CDPF1-201ENST00000314567 TOB2Q14106 344 aaPredicted RBP29.44■■■□□ 2.3
CDPF1-201ENST00000314567 GPR162Q16538 588 aa29.44■■■□□ 2.3
CDPF1-201ENST00000314567 TPCN1Q9ULQ1 816 aa29.44■■■□□ 2.3
CDPF1-201ENST00000314567 GAKO14976 1311 aa29.44■■■□□ 2.3
CDPF1-201ENST00000314567 ZMYM6O95789 1325 aa29.44■■■□□ 2.3
CDPF1-201ENST00000314567 BAZ2AQ9UIF9 1905 aaKnown RBP29.44■■■□□ 2.3
CDPF1-201ENST00000314567 PATL2C9JE40 543 aaKnown RBP29.44■■■□□ 2.3
CDPF1-201ENST00000314567 LMNB1P20700 586 aa29.44■■■□□ 2.3
CDPF1-201ENST00000314567 ME3Q16798 604 aa29.44■■■□□ 2.3
CDPF1-201ENST00000314567 CIAPIN1Q6FI81 312 aa29.44■■■□□ 2.3
CDPF1-201ENST00000314567 DHX32Q7L7V1 743 aaKnown RBP29.44■■■□□ 2.3
CDPF1-201ENST00000314567 ZNF541Q9H0D2 1346 aa29.43■■■□□ 2.3
CDPF1-201ENST00000314567 GPR75-ASB3A0A0A6YYF3 556 aa29.43■■■□□ 2.3
CDPF1-201ENST00000314567 CRKP46108 304 aa29.43■■■□□ 2.3
CDPF1-201ENST00000314567 HAND2P61296 217 aa29.43■■■□□ 2.3
CDPF1-201ENST00000314567 PKP1Q13835 747 aa29.43■■■□□ 2.3
CDPF1-201ENST00000314567 COL9A3Q14050 684 aaPredicted RBP29.43■■■□□ 2.3
CDPF1-201ENST00000314567 IFNL3Q8IZI9 196 aa29.43■■■□□ 2.3
CDPF1-201ENST00000314567 GMLQ99445 158 aa29.43■■■□□ 2.3
CDPF1-201ENST00000314567 DICER1Q9UPY3 1922 aaKnown RBP29.42■■■□□ 2.3
CDPF1-201ENST00000314567 GOLGA6L22H0YM25 854 aa29.42■■■□□ 2.3
CDPF1-201ENST00000314567 FZD9O00144 591 aa29.42■■■□□ 2.3
CDPF1-201ENST00000314567 BRD1O95696 1058 aa29.42■■■□□ 2.3
CDPF1-201ENST00000314567 FAM163AQ96GL9 167 aaPredicted RBP29.42■■■□□ 2.3
CDPF1-201ENST00000314567 LARP6Q9BRS8 491 aaKnown RBP29.42■■■□□ 2.3
CDPF1-201ENST00000314567 SMC3Q9UQE7 1217 aa29.42■■■□□ 2.3
CDPF1-201ENST00000314567 SHTN1A0MZ66 631 aa29.42■■■□□ 2.3
CDPF1-201ENST00000314567 ZDHHC9Q9Y397 364 aa29.42■■■□□ 2.3
CDPF1-201ENST00000314567 BAG4O95429 457 aaKnown RBP29.41■■■□□ 2.3
CDPF1-201ENST00000314567 CCDC83Q8IWF9 413 aa29.41■■■□□ 2.3
CDPF1-201ENST00000314567 TEKT1Q969V4 418 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms