RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 RPAP1Q9BWH6 1393 aaPredicted RBP22.56■■□□□ 1.2
RPA2-201ENST00000313433 NFIAQ12857 509 aa22.56■■□□□ 1.2
RPA2-201ENST00000313433 CRBNQ96SW2 442 aa22.56■■□□□ 1.2
RPA2-201ENST00000313433 CASP8AP2Q9UKL3 1982 aa22.56■■□□□ 1.2
RPA2-201ENST00000313433 MKRN3Q13064 507 aaKnown RBP22.55■■□□□ 1.2
RPA2-201ENST00000313433 SUPT20HL1Q3ZLR7 823 aa22.55■■□□□ 1.2
RPA2-201ENST00000313433 FKBP1CQ5VVH2 108 aa22.55■■□□□ 1.2
RPA2-201ENST00000313433 FAM83AQ86UY5 434 aa22.55■■□□□ 1.2
RPA2-201ENST00000313433 FAM198AQ9UFP1 575 aa22.55■■□□□ 1.2
RPA2-201ENST00000313433 ABCF2Q9UG63 623 aa22.55■■□□□ 1.2
RPA2-201ENST00000313433 GJA5P36382 358 aa22.54■■□□□ 1.2
RPA2-201ENST00000313433 MECOMQ03112 1051 aa22.54■■□□□ 1.2
RPA2-201ENST00000313433 GORABQ5T7V8 394 aa22.54■■□□□ 1.2
RPA2-201ENST00000313433 RPAP2Q8IXW5 612 aaPredicted RBP22.54■■□□□ 1.2
RPA2-201ENST00000313433 ZGPATQ8N5A5 531 aaKnown RBP22.54■■□□□ 1.2
RPA2-201ENST00000313433 CCDC8Q9H0W5 538 aaPredicted RBP22.54■■□□□ 1.2
RPA2-201ENST00000313433 PCDHB15Q9Y5E8 787 aa22.54■■□□□ 1.2
RPA2-201ENST00000313433 TNNI2P48788 182 aa22.53■■□□□ 1.2
RPA2-201ENST00000313433 SPRYD7Q5W111 196 aa22.53■■□□□ 1.2
RPA2-201ENST00000313433 ZFPM1Q8IX07 1006 aa22.53■■□□□ 1.2
RPA2-201ENST00000313433 SNRKQ9NRH2 765 aa22.53■■□□□ 1.2
RPA2-201ENST00000313433 MROH7-TTC4A0A0A0MT08 1334 aa22.53■■□□□ 1.2
RPA2-201ENST00000313433 PPP1R12BO60237 982 aaPredicted RBP22.52■■□□□ 1.2
RPA2-201ENST00000313433 UQCRFS1P1P0C7P4 283 aa22.52■■□□□ 1.2
RPA2-201ENST00000313433 IFFO2Q5TF58 517 aa22.52■■□□□ 1.2
RPA2-201ENST00000313433 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.52■■□□□ 1.2
RPA2-201ENST00000313433 DZIP1Q86YF9 867 aaKnown RBP22.52■■□□□ 1.2
RPA2-201ENST00000313433 NSUN4Q96CB9 384 aaKnown RBP22.52■■□□□ 1.2
RPA2-201ENST00000313433 FAM163AQ96GL9 167 aaPredicted RBP22.52■■□□□ 1.2
RPA2-201ENST00000313433 BEGAINQ9BUH8 593 aa22.52■■□□□ 1.2
RPA2-201ENST00000313433 RNF186Q9NXI6 227 aa22.52■■□□□ 1.2
RPA2-201ENST00000313433 AK9Q5TCS8 1911 aa22.52■■□□□ 1.2
RPA2-201ENST00000313433 FOCADQ5VW36 1801 aa22.52■■□□□ 1.2
RPA2-201ENST00000313433 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.51■■□□□ 1.19
RPA2-201ENST00000313433 WNK4Q96J92 1243 aa22.51■■□□□ 1.19
RPA2-201ENST00000313433 ZNF512BQ96KM6 892 aaPredicted RBP22.51■■□□□ 1.19
RPA2-201ENST00000313433 USP40Q9NVE5 1235 aa22.51■■□□□ 1.19
RPA2-201ENST00000313433 TMOD2Q9NZR1 351 aa22.51■■□□□ 1.19
RPA2-201ENST00000313433 ATRNL1Q5VV63 1379 aa22.5■■□□□ 1.19
RPA2-201ENST00000313433 CA12O43570 354 aa22.5■■□□□ 1.19
RPA2-201ENST00000313433 CYP2E1P05181 493 aaPredicted RBP22.5■■□□□ 1.19
RPA2-201ENST00000313433 RHBDL3P58872 404 aa22.5■■□□□ 1.19
RPA2-201ENST00000313433 TCP10Q12799 353 aa22.5■■□□□ 1.19
RPA2-201ENST00000313433 TTC39AQ5SRH9 613 aa22.5■■□□□ 1.19
RPA2-201ENST00000313433 ERICH6Q7L0X2 663 aa22.5■■□□□ 1.19
RPA2-201ENST00000313433 RHPN1Q8TCX5 695 aa22.5■■□□□ 1.19
RPA2-201ENST00000313433 IL1RAPL2Q9NP60 686 aa22.5■■□□□ 1.19
RPA2-201ENST00000313433 DDX4Q9NQI0 724 aaKnown RBP22.5■■□□□ 1.19
RPA2-201ENST00000313433 SIPA1L1O43166 1804 aa22.5■■□□□ 1.19
RPA2-201ENST00000313433 WDHD1O75717 1129 aaPredicted RBP22.49■■□□□ 1.19
RPA2-201ENST00000313433 BTDP43251 543 aa22.49■■□□□ 1.19
RPA2-201ENST00000313433 IREB2P48200 963 aaKnown RBP22.49■■□□□ 1.19
RPA2-201ENST00000313433 SPTY2D1Q68D10 685 aaPredicted RBP22.49■■□□□ 1.19
RPA2-201ENST00000313433 TNS4Q8IZW8 715 aa22.49■■□□□ 1.19
RPA2-201ENST00000313433 FAM151AQ8WW52 585 aa22.49■■□□□ 1.19
RPA2-201ENST00000313433 CNKSR2Q8WXI2 1034 aa22.49■■□□□ 1.19
RPA2-201ENST00000313433 SAGE1Q9NXZ1 904 aa22.49■■□□□ 1.19
RPA2-201ENST00000313433 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.49■■□□□ 1.19
RPA2-201ENST00000313433 GPR75-ASB3A0A0A6YYF3 556 aa22.48■■□□□ 1.19
RPA2-201ENST00000313433 TRPA1O75762 1119 aa22.48■■□□□ 1.19
RPA2-201ENST00000313433 ZAP70P43403 619 aa22.48■■□□□ 1.19
RPA2-201ENST00000313433 TM4SF4P48230 202 aa22.48■■□□□ 1.19
RPA2-201ENST00000313433 VGLL4Q14135 290 aa22.48■■□□□ 1.19
RPA2-201ENST00000313433 SH3BP5LQ7L8J4 393 aa22.48■■□□□ 1.19
RPA2-201ENST00000313433 IDI2Q9BXS1 227 aa22.48■■□□□ 1.19
RPA2-201ENST00000313433 PIH1D3Q9NQM4 214 aaKnown RBP22.48■■□□□ 1.19
RPA2-201ENST00000313433 SUPT16HQ9Y5B9 1047 aaKnown RBP22.48■■□□□ 1.19
RPA2-201ENST00000313433 NDUFB9Q9Y6M9 179 aa22.48■■□□□ 1.19
RPA2-201ENST00000313433 UNCXA6NJT0 531 aa22.47■■□□□ 1.19
RPA2-201ENST00000313433 APBB1O00213 710 aa22.47■■□□□ 1.19
RPA2-201ENST00000313433 SLURP2P0DP57 97 aa22.47■■□□□ 1.19
RPA2-201ENST00000313433 CCDC158Q5M9N0 1113 aa22.47■■□□□ 1.19
RPA2-201ENST00000313433 ADGRA1Q86SQ6 560 aa22.47■■□□□ 1.19
RPA2-201ENST00000313433 AACSQ86V21 672 aa22.47■■□□□ 1.19
RPA2-201ENST00000313433 ERC1Q8IUD2 1116 aa22.47■■□□□ 1.19
RPA2-201ENST00000313433 ANKRD13AQ8IZ07 590 aa22.47■■□□□ 1.19
RPA2-201ENST00000313433 SLC10A4Q96EP9 437 aa22.47■■□□□ 1.19
RPA2-201ENST00000313433 ELP3Q9H9T3 547 aa22.47■■□□□ 1.19
RPA2-201ENST00000313433 RGS3P49796 1198 aa22.46■■□□□ 1.19
RPA2-201ENST00000313433 SNCAIPQ9Y6H5 919 aa22.46■■□□□ 1.19
RPA2-201ENST00000313433 HMMRO75330 724 aa22.45■■□□□ 1.18
RPA2-201ENST00000313433 ZBTB48P10074 688 aaPredicted RBP22.45■■□□□ 1.18
RPA2-201ENST00000313433 MIGA2Q7L4E1 593 aa22.45■■□□□ 1.18
RPA2-201ENST00000313433 REM2Q8IYK8 340 aaPredicted RBP22.45■■□□□ 1.18
RPA2-201ENST00000313433 CHMP4BQ9H444 224 aaKnown RBP22.45■■□□□ 1.18
RPA2-201ENST00000313433 RAI14Q9P0K7 980 aa22.45■■□□□ 1.18
RPA2-201ENST00000313433 MAP3K9P80192 1104 aa22.44■■□□□ 1.18
RPA2-201ENST00000313433 HSP90AB4PQ58FF6 505 aa22.44■■□□□ 1.18
RPA2-201ENST00000313433 OPTNQ96CV9 577 aa22.44■■□□□ 1.18
RPA2-201ENST00000313433 KIF1BPQ96EK5 621 aa22.44■■□□□ 1.18
RPA2-201ENST00000313433 R3HDMLQ9H3Y0 253 aa22.44■■□□□ 1.18
RPA2-201ENST00000313433 ANTXR1Q9H6X2 564 aa22.44■■□□□ 1.18
RPA2-201ENST00000313433 PHIPQ8WWQ0 1821 aa22.43■■□□□ 1.18
RPA2-201ENST00000313433 DDTLA6NHG4 134 aaPredicted RBP22.43■■□□□ 1.18
RPA2-201ENST00000313433 IGF2BP3O00425 579 aaKnown RBP eCLIP22.43■■□□□ 1.18
RPA2-201ENST00000313433 SLF2Q8IX21 1173 aa22.43■■□□□ 1.18
RPA2-201ENST00000313433 ZKSCAN4Q969J2 545 aaPredicted RBP22.43■■□□□ 1.18
RPA2-201ENST00000313433 WRNIP1Q96S55 665 aa22.43■■□□□ 1.18
RPA2-201ENST00000313433 LRP2BPQ9P2M1 347 aa22.43■■□□□ 1.18
RPA2-201ENST00000313433 SMARCA5O60264 1052 aaPredicted RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms