RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 VPS33BQ9H267 617 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 CICQ96RK0 1608 aaPredicted RBP6.94□□□□□ -1.3
SEC22A-201ENST00000309934 GOLGA8AA7E2F4 631 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 GOLGA8BA8MQT2 603 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 STX6O43752 255 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 TRAK2O60296 914 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 ADD2P35612 726 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 HLFQ16534 295 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 SP8Q8IXZ3 490 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 RTKN2Q8IZC4 609 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 ARHGEF1Q92888 912 aaKnown RBP6.94□□□□□ -1.3
SEC22A-201ENST00000309934 EHMT1Q9H9B1 1298 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 SNRKQ9NRH2 765 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 DACH1Q9UI36 760 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 SALL3Q9BXA9 1300 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 MED23Q9ULK4 1368 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 RIC1Q4ADV7 1423 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 PPEF1O14829 653 aaPredicted RBP6.94□□□□□ -1.3
SEC22A-201ENST00000309934 ZBTB43O43298 467 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 TRIM37O94972 964 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 PDE6AP16499 860 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 TNNI2P48788 182 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 LRRC24Q50LG9 513 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 ZNF594Q96JF6 807 aaPredicted RBP6.94□□□□□ -1.3
SEC22A-201ENST00000309934 MYCBPQ99417 103 aaPredicted RBP6.94□□□□□ -1.3
SEC22A-201ENST00000309934 SH2D4AQ9H788 454 aa6.94□□□□□ -1.3
SEC22A-201ENST00000309934 TAF5LO75529 589 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 ZSCAN22P10073 491 aaPredicted RBP6.93□□□□□ -1.3
SEC22A-201ENST00000309934 CALML3P27482 149 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 ZAP70P43403 619 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 METAP2P50579 478 aaKnown RBP eCLIP6.93□□□□□ -1.3
SEC22A-201ENST00000309934 STYK1Q6J9G0 422 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 ATG9AQ7Z3C6 839 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 OGFOD1Q8N543 542 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 LINC00116Q8NCU8 138 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 C8orf76Q96K31 380 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 KAT14Q9H8E8 782 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 NSFL1CQ9UNZ2 370 aaKnown RBP6.93□□□□□ -1.3
SEC22A-201ENST00000309934 PNPLA7Q6ZV29 1317 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 XIRP1Q702N8 1843 aaKnown RBP6.93□□□□□ -1.3
SEC22A-201ENST00000309934 PRC1O43663 620 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 IARSP41252 1262 aaKnown RBP6.93□□□□□ -1.3
SEC22A-201ENST00000309934 ITPK1Q13572 414 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 RRP12Q5JTH9 1297 aaKnown RBP6.93□□□□□ -1.3
SEC22A-201ENST00000309934 BICD2Q8TD16 824 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 ZBTB9Q96C00 473 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 CCDC97Q96F63 343 aaPredicted RBP6.93□□□□□ -1.3
SEC22A-201ENST00000309934 FOXD4L1Q9NU39 408 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 SEC63Q9UGP8 760 aaKnown RBP6.93□□□□□ -1.3
SEC22A-201ENST00000309934 STK38Q15208 465 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 EPHA10Q5JZY3 1008 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 IL17RAQ96F46 866 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 CABP5Q9NP86 173 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 DDX19AQ9NUU7 478 aaKnown RBP6.93□□□□□ -1.3
SEC22A-201ENST00000309934 ZNF532Q9HCE3 1301 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 KINO60870 393 aaKnown RBP6.93□□□□□ -1.3
SEC22A-201ENST00000309934 MBD4O95243 580 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 TSHZ3Q63HK5 1081 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 SASS6Q6UVJ0 657 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 CCDC83Q8IWF9 413 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 CRACR2BQ8N4Y2 399 aaPredicted RBP6.93□□□□□ -1.3
SEC22A-201ENST00000309934 UPF3BQ9BZI7 483 aaKnown RBP6.93□□□□□ -1.3
SEC22A-201ENST00000309934 SWAP70Q9UH65 585 aa6.93□□□□□ -1.3
SEC22A-201ENST00000309934 ANGEL1Q9UNK9 670 aaKnown RBP6.93□□□□□ -1.3
SEC22A-201ENST00000309934 SIPA1L3O60292 1781 aaPredicted RBP6.92□□□□□ -1.3
SEC22A-201ENST00000309934 AK2P54819 239 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 CUL4AQ13619 759 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 Q6ZUG5 572 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 C15orf52Q6ZUT6 534 aaKnown RBP6.92□□□□□ -1.3
SEC22A-201ENST00000309934 LRP10Q7Z4F1 713 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 SPEF2Q9C093 1822 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 RGPD5Q99666 1765 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.92□□□□□ -1.3
SEC22A-201ENST00000309934 DUOX1Q9NRD9 1551 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 MINDY4BA8MYZ0 360 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 MARCH6O60337 910 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 GJB2P29033 226 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 KANK3Q6NY19 840 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 C2CD5Q86YS7 1000 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 ANKRD20A12PQ8NF67 263 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 KLHDC4Q8TBB5 520 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 JDP2Q8WYK2 163 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 SUDS3Q9H7L9 328 aaPredicted RBP6.92□□□□□ -1.3
SEC22A-201ENST00000309934 STK24Q9Y6E0 443 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 RGPD2P0DJD1 1756 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 TSPY2A6NKD2 308 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 DDAH1O94760 285 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 RTN1Q16799 776 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 KLHL40Q2TBA0 621 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 AKNAD1Q5T1N1 836 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 IFIT1BQ5T764 474 aaKnown RBP6.92□□□□□ -1.3
SEC22A-201ENST00000309934 UTP14CQ5TAP6 766 aaKnown RBP6.92□□□□□ -1.3
SEC22A-201ENST00000309934 KCNB2Q92953 911 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 SPATA32Q96LK8 384 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 TCEAL9Q9UHQ7 104 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 BCL9LQ86UU0 1499 aa6.92□□□□□ -1.3
SEC22A-201ENST00000309934 GOLGA6L19H0YKK7 550 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 hCG_1984214I3L0E3 225 aa6.91□□□□□ -1.3
SEC22A-201ENST00000309934 HSPD1P10809 573 aaKnown RBP6.91□□□□□ -1.3
SEC22A-201ENST00000309934 UBE2HP62256 183 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms