RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 BCL11BQ9C0K0 894 aaPredicted RBP13.43□□□□□ -0.26
PTPN2-201ENST00000309660 CLIP2Q9UDT6 1046 aa13.43□□□□□ -0.26
PTPN2-201ENST00000309660 PAPPAQ13219 1627 aa13.43□□□□□ -0.26
PTPN2-201ENST00000309660 SH2B2O14492 632 aaPredicted RBP13.43□□□□□ -0.26
PTPN2-201ENST00000309660 CAMTA2O94983 1202 aa13.43□□□□□ -0.26
PTPN2-201ENST00000309660 FAM98CQ17RN3 349 aaKnown RBP13.43□□□□□ -0.26
PTPN2-201ENST00000309660 MFSD6Q6ZSS7 791 aa13.43□□□□□ -0.26
PTPN2-201ENST00000309660 FGFR2P21802 821 aa13.42□□□□□ -0.26
PTPN2-201ENST00000309660 CYP7A1P22680 504 aa13.42□□□□□ -0.26
PTPN2-201ENST00000309660 ABCA3Q99758 1704 aa13.42□□□□□ -0.26
PTPN2-201ENST00000309660 PATL2C9JE40 543 aaKnown RBP13.42□□□□□ -0.26
PTPN2-201ENST00000309660 ZNF75DP51815 510 aa13.42□□□□□ -0.26
PTPN2-201ENST00000309660 KRT40Q6A162 431 aa13.42□□□□□ -0.26
PTPN2-201ENST00000309660 AOPEPQ8N6M6 819 aa13.42□□□□□ -0.26
PTPN2-201ENST00000309660 NACAP1Q9BZK3 213 aa13.42□□□□□ -0.26
PTPN2-201ENST00000309660 JAG2Q9Y219 1238 aa13.42□□□□□ -0.26
PTPN2-201ENST00000309660 TCRBV5S4A2TA0A5A2 114 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 EVCP57679 992 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 KIF23Q02241 960 aaPredicted RBP13.41□□□□□ -0.26
PTPN2-201ENST00000309660 FAM182BQ5T319 152 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 RTEL1Q9NZ71 1219 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 DISP2A7MBM2 1401 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 SPATA31A1Q5TZJ5 1347 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 ABCC12Q96J65 1359 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 CTAGE5O15320 804 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 CDKL5O76039 1030 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 ANO1Q5XXA6 986 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 RBM43Q6ZSC3 357 aaKnown RBP13.41□□□□□ -0.26
PTPN2-201ENST00000309660 KCNG4Q8TDN1 519 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 ZMYM6O95789 1325 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 SLC4A8Q2Y0W8 1093 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 ERFEQ4G0M1 354 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 ADALQ6DHV7 355 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 ITGB4P16144 1822 aa13.41□□□□□ -0.26
PTPN2-201ENST00000309660 ERICH2A1L162 156 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 SMIM22K7EJ46 135 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 PARP10Q53GL7 1025 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 CEP57L1Q8IYX8 460 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 TDRD7Q8NHU6 1098 aaKnown RBP13.4□□□□□ -0.26
PTPN2-201ENST00000309660 ZNF512BQ96KM6 892 aaPredicted RBP13.4□□□□□ -0.26
PTPN2-201ENST00000309660 ANO10Q9NW15 660 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 GSG1L2A8MUP6 293 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 ATL3Q6DD88 541 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 C3orf67Q6ZVT6 689 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 ENGASEQ8NFI3 743 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 PRDM1O75626 825 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 NTSR2O95665 410 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 SPECC1Q5M775 1068 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 AKNAD1Q5T1N1 836 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 BRAPQ7Z569 592 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 ANKRD18AQ8IVF6 992 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 LY9Q9HBG7 655 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 KCNJ14Q9UNX9 436 aa13.4□□□□□ -0.26
PTPN2-201ENST00000309660 FMR1NBQ8N0W7 255 aaPredicted RBP13.39□□□□□ -0.27
PTPN2-201ENST00000309660 IGDCC4Q8TDY8 1250 aa13.39□□□□□ -0.27
PTPN2-201ENST00000309660 TMEM87BQ96K49 555 aa13.39□□□□□ -0.27
PTPN2-201ENST00000309660 CDC5LQ99459 802 aaKnown RBP13.39□□□□□ -0.27
PTPN2-201ENST00000309660 SLC3A2P08195 630 aaKnown RBP13.39□□□□□ -0.27
PTPN2-201ENST00000309660 ARID5BQ14865 1188 aa13.39□□□□□ -0.27
PTPN2-201ENST00000309660 SART3Q15020 963 aaKnown RBP13.39□□□□□ -0.27
PTPN2-201ENST00000309660 KIAA1524Q8TCG1 905 aa13.39□□□□□ -0.27
PTPN2-201ENST00000309660 C16orf45Q96MC5 204 aaPredicted RBP13.39□□□□□ -0.27
PTPN2-201ENST00000309660 CLIC6Q96NY7 704 aa13.39□□□□□ -0.27
PTPN2-201ENST00000309660 CYP2D7A0A087X1C5 515 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 hCG_1642624A0A1W2PR95 340 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 ZNF202O95125 648 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 SSRP1Q08945 709 aaKnown RBP13.38□□□□□ -0.27
PTPN2-201ENST00000309660 CHAF1AQ13111 956 aaPredicted RBP13.38□□□□□ -0.27
PTPN2-201ENST00000309660 WTAPQ15007 396 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 DPCR1Q3MIW9 517 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 FBXL16Q8N461 479 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 C8orf37Q96NL8 207 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 UBAC1Q9BSL1 405 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 RANBP6O60518 1105 aaKnown RBP13.38□□□□□ -0.27
PTPN2-201ENST00000309660 CCDC144BQ3MJ40 725 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 CDCA7Q9BWT1 371 aaPredicted RBP13.38□□□□□ -0.27
PTPN2-201ENST00000309660 POLR3EQ9NVU0 708 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 TACC3Q9Y6A5 838 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 LRP6O75581 1613 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 WDHD1O75717 1129 aaPredicted RBP13.38□□□□□ -0.27
PTPN2-201ENST00000309660 YEATS4O95619 227 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 TPM3P06753 285 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 PFKFB1P16118 471 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 GUCY1A2P33402 732 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 IQCB1Q15051 598 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 PTF1AQ7RTS3 328 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 ADGRA1Q86SQ6 560 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 NWD2Q9ULI1 1742 aa13.38□□□□□ -0.27
PTPN2-201ENST00000309660 SMC2O95347 1197 aa13.37□□□□□ -0.27
PTPN2-201ENST00000309660 NAT10Q9H0A0 1025 aaKnown RBP13.37□□□□□ -0.27
PTPN2-201ENST00000309660 MYO5AQ9Y4I1 1855 aaKnown RBP13.37□□□□□ -0.27
PTPN2-201ENST00000309660 SPEF2Q9C093 1822 aa13.37□□□□□ -0.27
PTPN2-201ENST00000309660 RTN1Q16799 776 aa13.37□□□□□ -0.27
PTPN2-201ENST00000309660 KRT23Q9C075 422 aa13.37□□□□□ -0.27
PTPN2-201ENST00000309660 TFCP2L1Q9NZI6 479 aa13.37□□□□□ -0.27
PTPN2-201ENST00000309660 BTBD18B2RXH4 712 aa13.37□□□□□ -0.27
PTPN2-201ENST00000309660 DYNLL1P63167 89 aaKnown RBP13.37□□□□□ -0.27
PTPN2-201ENST00000309660 CAVIN4Q5BKX8 364 aa13.37□□□□□ -0.27
PTPN2-201ENST00000309660 PLA2G4DQ86XP0 818 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms