RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ADGRB1O14514 1584 aa6.86□□□□□ -1.31
CKS1B-201ENST00000308987 SBNO1A3KN83 1393 aa6.85□□□□□ -1.31
CKS1B-201ENST00000308987 GOLGB1Q14789 3259 aaKnown RBP6.85□□□□□ -1.31
CKS1B-201ENST00000308987 PRR36Q9H6K5 1346 aa6.85□□□□□ -1.31
CKS1B-201ENST00000308987 C21orf2O43822 256 aa6.85□□□□□ -1.31
CKS1B-201ENST00000308987 MLLT1Q03111 559 aaPredicted RBP6.85□□□□□ -1.31
CKS1B-201ENST00000308987 SAFB2Q14151 953 aaKnown RBP eCLIP6.85□□□□□ -1.31
CKS1B-201ENST00000308987 HIF1AQ16665 826 aa6.85□□□□□ -1.31
CKS1B-201ENST00000308987 TRPM4Q8TD43 1214 aa6.85□□□□□ -1.31
CKS1B-201ENST00000308987 MRPL18Q9H0U6 180 aaKnown RBP6.85□□□□□ -1.31
CKS1B-201ENST00000308987 ZFATQ9P243 1243 aa6.85□□□□□ -1.31
CKS1B-201ENST00000308987 ARHGEF28Q8N1W1 1705 aaKnown RBP6.84□□□□□ -1.31
CKS1B-201ENST00000308987 PHRF1Q9P1Y6 1649 aaKnown RBP6.84□□□□□ -1.31
CKS1B-201ENST00000308987 USP17L5A8MUK1 530 aa6.84□□□□□ -1.31
CKS1B-201ENST00000308987 GSC2O15499 205 aa6.84□□□□□ -1.31
CKS1B-201ENST00000308987 GRNP28799 593 aaKnown RBP6.84□□□□□ -1.31
CKS1B-201ENST00000308987 DHX32Q7L7V1 743 aaKnown RBP6.84□□□□□ -1.31
CKS1B-201ENST00000308987 KRT27Q7Z3Y8 459 aa6.84□□□□□ -1.31
CKS1B-201ENST00000308987 TRIM50Q86XT4 487 aa6.84□□□□□ -1.31
CKS1B-201ENST00000308987 PMFBP1Q8TBY8 1022 aa6.84□□□□□ -1.31
CKS1B-201ENST00000308987 PRAM1Q96QH2 718 aa6.84□□□□□ -1.31
CKS1B-201ENST00000308987 SMG9Q9H0W8 520 aaKnown RBP6.84□□□□□ -1.31
CKS1B-201ENST00000308987 ALG2Q9H553 416 aa6.84□□□□□ -1.31
CKS1B-201ENST00000308987 DLC1Q96QB1 1528 aa6.84□□□□□ -1.31
CKS1B-201ENST00000308987 RREB1Q92766 1687 aa6.84□□□□□ -1.32
CKS1B-201ENST00000308987 SBF2Q86WG5 1849 aa6.83□□□□□ -1.32
CKS1B-201ENST00000308987 IER5Q5VY09 327 aa6.83□□□□□ -1.32
CKS1B-201ENST00000308987 KRT25Q7Z3Z0 450 aa6.83□□□□□ -1.32
CKS1B-201ENST00000308987 STOML1Q9UBI4 398 aa6.83□□□□□ -1.32
CKS1B-201ENST00000308987 DMGDHQ9UI17 866 aaKnown RBP6.83□□□□□ -1.32
CKS1B-201ENST00000308987 NUP188Q5SRE5 1749 aa6.83□□□□□ -1.32
CKS1B-201ENST00000308987 ITSN1Q15811 1721 aa6.82□□□□□ -1.32
CKS1B-201ENST00000308987 M0R2N6 131 aa6.82□□□□□ -1.32
CKS1B-201ENST00000308987 TARSP26639 723 aaKnown RBP6.82□□□□□ -1.32
CKS1B-201ENST00000308987 CLDN10P78369 228 aa6.82□□□□□ -1.32
CKS1B-201ENST00000308987 Q6ZS46 218 aa6.82□□□□□ -1.32
CKS1B-201ENST00000308987 HFE2Q6ZVN8 426 aa6.82□□□□□ -1.32
CKS1B-201ENST00000308987 ZDHHC13Q8IUH4 622 aa6.82□□□□□ -1.32
CKS1B-201ENST00000308987 TSEN2Q8NCE0 465 aaKnown RBP6.82□□□□□ -1.32
CKS1B-201ENST00000308987 C2orf49Q9BVC5 232 aaPredicted RBP6.82□□□□□ -1.32
CKS1B-201ENST00000308987 HIRIP3Q9BW71 556 aaPredicted RBP6.82□□□□□ -1.32
CKS1B-201ENST00000308987 BTG4Q9NY30 223 aa6.82□□□□□ -1.32
CKS1B-201ENST00000308987 BCS1LQ9Y276 419 aa6.82□□□□□ -1.32
CKS1B-201ENST00000308987 CCDC9Q9Y3X0 531 aaKnown RBP6.82□□□□□ -1.32
CKS1B-201ENST00000308987 ANKARQ7Z5J8 1434 aa6.82□□□□□ -1.32
CKS1B-201ENST00000308987 ARHGEF10O15013 1369 aa6.82□□□□□ -1.32
CKS1B-201ENST00000308987 TULP4Q9NRJ4 1543 aa6.81□□□□□ -1.32
CKS1B-201ENST00000308987 SPATA31A5Q5VU36 1347 aa6.81□□□□□ -1.32
CKS1B-201ENST00000308987 SPATA31A7Q8IWB4 1347 aa6.81□□□□□ -1.32
CKS1B-201ENST00000308987 TOPAZ1Q8N9V7 1692 aa6.81□□□□□ -1.32
CKS1B-201ENST00000308987 GLB1P16278 677 aa6.81□□□□□ -1.32
CKS1B-201ENST00000308987 SPINK2P20155 84 aa6.81□□□□□ -1.32
CKS1B-201ENST00000308987 ATP1A2P50993 1020 aa6.81□□□□□ -1.32
CKS1B-201ENST00000308987 GPLD1P80108 840 aa6.81□□□□□ -1.32
CKS1B-201ENST00000308987 AGGF1Q8N302 714 aaeCLIP6.81□□□□□ -1.32
CKS1B-201ENST00000308987 STAG2Q8N3U4 1231 aa6.81□□□□□ -1.32
CKS1B-201ENST00000308987 IFT43Q96FT9 208 aa6.81□□□□□ -1.32
CKS1B-201ENST00000308987 UBL7Q96S82 380 aaPredicted RBP6.81□□□□□ -1.32
CKS1B-201ENST00000308987 RBM19Q9Y4C8 960 aaKnown RBP6.81□□□□□ -1.32
CKS1B-201ENST00000308987 DISP2A7MBM2 1401 aa6.81□□□□□ -1.32
CKS1B-201ENST00000308987 TGFBR3LH3BV60 316 aa6.8□□□□□ -1.32
CKS1B-201ENST00000308987 R3HDM1Q15032 1099 aaKnown RBP6.8□□□□□ -1.32
CKS1B-201ENST00000308987 INTS5Q6P9B9 1019 aaKnown RBP6.8□□□□□ -1.32
CKS1B-201ENST00000308987 YTHDC1Q96MU7 727 aaKnown RBP6.8□□□□□ -1.32
CKS1B-201ENST00000308987 LMO7Q8WWI1 1683 aa6.8□□□□□ -1.32
CKS1B-201ENST00000308987 RGPD5Q99666 1765 aa6.8□□□□□ -1.32
CKS1B-201ENST00000308987 ATP7BP35670 1465 aa6.79□□□□□ -1.32
CKS1B-201ENST00000308987 RAD21O60216 631 aa6.79□□□□□ -1.32
CKS1B-201ENST00000308987 SASH3O75995 380 aa6.79□□□□□ -1.32
CKS1B-201ENST00000308987 EPB42P16452 691 aa6.79□□□□□ -1.32
CKS1B-201ENST00000308987 INPP5BP32019 993 aa6.79□□□□□ -1.32
CKS1B-201ENST00000308987 GRIK1P39086 918 aa6.79□□□□□ -1.32
CKS1B-201ENST00000308987 SF3B2Q13435 895 aaKnown RBP6.79□□□□□ -1.32
CKS1B-201ENST00000308987 MCM6Q14566 821 aa6.79□□□□□ -1.32
CKS1B-201ENST00000308987 EZH2Q15910 746 aaKnown RBP6.79□□□□□ -1.32
CKS1B-201ENST00000308987 CAMKK2Q96RR4 588 aa6.79□□□□□ -1.32
CKS1B-201ENST00000308987 KRTAP4-2Q9BYR5 136 aa6.79□□□□□ -1.32
CKS1B-201ENST00000308987 TRAK1Q9UPV9 953 aa6.79□□□□□ -1.32
CKS1B-201ENST00000308987 CAMTA1Q9Y6Y1 1673 aa6.79□□□□□ -1.32
CKS1B-201ENST00000308987 RAB3GAP2Q9H2M9 1393 aa6.79□□□□□ -1.32
CKS1B-201ENST00000308987 PEAK1Q9H792 1746 aa6.79□□□□□ -1.32
CKS1B-201ENST00000308987 NRKQ7Z2Y5 1582 aa6.78□□□□□ -1.32
CKS1B-201ENST00000308987 CEP350Q5VT06 3117 aa6.78□□□□□ -1.32
CKS1B-201ENST00000308987 DHX15O43143 795 aaKnown RBP6.78□□□□□ -1.32
CKS1B-201ENST00000308987 WNT11O96014 354 aa6.78□□□□□ -1.32
CKS1B-201ENST00000308987 RARAP10276 462 aa6.78□□□□□ -1.32
CKS1B-201ENST00000308987 JAG1P78504 1218 aa6.78□□□□□ -1.32
CKS1B-201ENST00000308987 SETDB1Q15047 1291 aa6.78□□□□□ -1.32
CKS1B-201ENST00000308987 CHRNA2Q15822 529 aa6.78□□□□□ -1.32
CKS1B-201ENST00000308987 RTN1Q16799 776 aa6.78□□□□□ -1.32
CKS1B-201ENST00000308987 DTX1Q86Y01 620 aa6.78□□□□□ -1.32
CKS1B-201ENST00000308987 LARGE2Q8N3Y3 721 aa6.78□□□□□ -1.32
CKS1B-201ENST00000308987 IL22RA1Q8N6P7 574 aa6.78□□□□□ -1.32
CKS1B-201ENST00000308987 SCG3Q8WXD2 468 aaKnown RBP6.78□□□□□ -1.32
CKS1B-201ENST00000308987 POGKQ9P215 609 aa6.78□□□□□ -1.32
CKS1B-201ENST00000308987 ADGRE2Q9UHX3 823 aa6.78□□□□□ -1.32
CKS1B-201ENST00000308987 KIAA0232Q92628 1395 aa6.78□□□□□ -1.32
CKS1B-201ENST00000308987 PARP4Q9UKK3 1724 aaKnown RBP6.78□□□□□ -1.32
CKS1B-201ENST00000308987 WNK3Q9BYP7 1800 aa6.78□□□□□ -1.32
CKS1B-201ENST00000308987 SPATA31A1Q5TZJ5 1347 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms