RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 SPDYE2BA6NHP3 402 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 TCP10L2B9ZVM9 353 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 K7ELQ4 463 aaPredicted RBP9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 SPDYE6P0CI01 402 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 RASA3Q14644 834 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 SUPT20HL1Q3ZLR7 823 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 MFSD14BQ5SR56 506 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 LDLRAD1Q5T700 205 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 MEIS3Q99687 375 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 ZNF609O15014 1411 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 IRS2Q9Y4H2 1338 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 CASP8AP2Q9UKL3 1982 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 FSD2A1L4K1 749 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 FKTNO75072 461 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 ALDH1L1O75891 902 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 PTMSP20962 102 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 MMP14P50281 582 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 RAB3GAP1Q15042 981 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 RABEP1Q15276 862 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 LRRC24Q50LG9 513 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 C15orf52Q6ZUT6 534 aaKnown RBP9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 SPRYD3Q8NCJ5 442 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 KLHDC4Q8TBB5 520 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 FAM84BQ96KN1 310 aaPredicted RBP9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 OSBPL3Q9H4L5 887 aa9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 ZNF70Q9UC06 446 aaPredicted RBP9.47□□□□□ -0.89
TM4SF1-201ENST00000305366 USP2O75604 605 aaPredicted RBP9.46□□□□□ -0.9
TM4SF1-201ENST00000305366 CACNB3P54284 484 aa9.46□□□□□ -0.9
TM4SF1-201ENST00000305366 FGD1P98174 961 aa9.46□□□□□ -0.9
TM4SF1-201ENST00000305366 METTL24Q5JXM2 366 aa9.46□□□□□ -0.9
TM4SF1-201ENST00000305366 KAZALD1Q96I82 304 aa9.46□□□□□ -0.9
TM4SF1-201ENST00000305366 WNK4Q96J92 1243 aa9.46□□□□□ -0.9
TM4SF1-201ENST00000305366 BICC1Q9H694 974 aaKnown RBP9.46□□□□□ -0.9
TM4SF1-201ENST00000305366 ELP3Q9H9T3 547 aa9.46□□□□□ -0.9
TM4SF1-201ENST00000305366 ISY1Q9ULR0 285 aaKnown RBP9.46□□□□□ -0.9
TM4SF1-201ENST00000305366 MANSC4A6NHS7 340 aaPredicted RBP9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 TRAK2O60296 914 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 IREB2P48200 963 aaKnown RBP9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 UBE4AQ14139 1066 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 GRIK5Q16478 980 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 CLEC17AQ6ZS10 378 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 IFNL1Q8IU54 200 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 CDAN1Q8IWY9 1227 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 MTMR14Q8NCE2 650 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 TDRD7Q8NHU6 1098 aaKnown RBP9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 IGF2BP3O00425 579 aaKnown RBP eCLIP9.45□□□□□ -0.91e-6■■■■□ 19.9
TM4SF1-201ENST00000305366 ECM2O94769 699 aaPredicted RBP9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 CRKP46108 304 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 BCAMP50895 628 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 PKN2Q16513 984 aaKnown RBP9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 CAVIN4Q5BKX8 364 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 CASC1Q6TDU7 716 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 PIP4P2Q8N4L2 257 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 GBP4Q96PP9 640 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 USP26Q9BXU7 913 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 TMEM39BQ9GZU3 492 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 RIPOR2Q9Y4F9 1068 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 TRIM17Q9Y577 477 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 PPP2R3BQ9Y5P8 575 aa9.45□□□□□ -0.9
TM4SF1-201ENST00000305366 CD2BP2O95400 341 aaKnown RBP9.44□□□□□ -0.9
TM4SF1-201ENST00000305366 ALDH1A1P00352 501 aa9.44□□□□□ -0.9
TM4SF1-201ENST00000305366 GNAI2P04899 355 aa9.44□□□□□ -0.9
TM4SF1-201ENST00000305366 GNAI3P08754 354 aa9.44□□□□□ -0.9
TM4SF1-201ENST00000305366 SDSP20132 328 aa9.44□□□□□ -0.9
TM4SF1-201ENST00000305366 GJA5P36382 358 aa9.44□□□□□ -0.9
TM4SF1-201ENST00000305366 FKBP1AP62942 108 aaKnown RBP9.44□□□□□ -0.9
TM4SF1-201ENST00000305366 POLR2AP24928 1970 aaKnown RBP9.44□□□□□ -0.9
TM4SF1-201ENST00000305366 FAM205AQ6ZU69 1335 aa9.43□□□□□ -0.9
TM4SF1-201ENST00000305366 MROH5Q6ZUA9 1318 aa9.43□□□□□ -0.9
TM4SF1-201ENST00000305366 GOLGA6L3A6NEY3 463 aa9.43□□□□□ -0.9
TM4SF1-201ENST00000305366 INHBEP58166 350 aa9.43□□□□□ -0.9
TM4SF1-201ENST00000305366 SPDYE2Q495Y8 402 aa9.43□□□□□ -0.9
TM4SF1-201ENST00000305366 FBXO46Q6PJ61 603 aaPredicted RBP9.43□□□□□ -0.9
TM4SF1-201ENST00000305366 ANKRD13AQ8IZ07 590 aa9.43□□□□□ -0.9
TM4SF1-201ENST00000305366 TNPO1Q92973 898 aaKnown RBP9.43□□□□□ -0.9
TM4SF1-201ENST00000305366 OPTNQ96CV9 577 aa9.43□□□□□ -0.9
TM4SF1-201ENST00000305366 SERPINA10Q9UK55 444 aa9.43□□□□□ -0.9
TM4SF1-201ENST00000305366 SALL3Q9BXA9 1300 aa9.43□□□□□ -0.9
TM4SF1-201ENST00000305366 CACNA1FO60840 1977 aa9.43□□□□□ -0.9
TM4SF1-201ENST00000305366 PAPPA2Q9BXP8 1791 aa9.43□□□□□ -0.9
TM4SF1-201ENST00000305366 REC8O95072 547 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 ZBTB48P10074 688 aaPredicted RBP9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 CRHR2Q13324 411 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 TNFAIP1Q13829 316 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 MAP3K11Q16584 847 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 SKOR2Q2VWA4 1001 aaPredicted RBP9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 OTUD7BQ6GQQ9 843 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 FBXO33Q7Z6M2 555 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 CD99L2Q8TCZ2 262 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 OTUD7AQ8TE49 926 aaPredicted RBP9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 PTPN18Q99952 460 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 PCDH10Q9P2E7 1040 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 PDE8BO95263 885 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 MYCP01106 439 aaPredicted RBP9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 TNNI2P48788 182 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 PDE1AP54750 535 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 MAP3K9P80192 1104 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 ATP8B2P98198 1209 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 FAM43AQ8N2R8 423 aa9.42□□□□□ -0.9
TM4SF1-201ENST00000305366 OTUD5Q96G74 571 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms