RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 MKRN1Q9UHC7 482 aaKnown RBP14.85□□□□□ -0.03
TRIM35-201ENST00000305364 EBAG9O00559 213 aa14.84□□□□□ -0.03
TRIM35-201ENST00000305364 SSRP1Q08945 709 aaKnown RBP14.84□□□□□ -0.03
TRIM35-201ENST00000305364 KRI1Q8N9T8 703 aaKnown RBP14.84□□□□□ -0.03
TRIM35-201ENST00000305364 NAPGQ99747 312 aaPredicted RBP14.84□□□□□ -0.03
TRIM35-201ENST00000305364 ZNHIT6Q9NWK9 470 aaKnown RBP14.84□□□□□ -0.03
TRIM35-201ENST00000305364 MROH1Q8NDA8 1641 aa14.84□□□□□ -0.03
TRIM35-201ENST00000305364 XBP1P17861 261 aa14.84□□□□□ -0.03
TRIM35-201ENST00000305364 GCKRQ14397 625 aa14.84□□□□□ -0.03
TRIM35-201ENST00000305364 KRT40Q6A162 431 aa14.84□□□□□ -0.03
TRIM35-201ENST00000305364 SRLQ86TD4 932 aa14.84□□□□□ -0.03
TRIM35-201ENST00000305364 IRX2Q9BZI1 471 aaPredicted RBP14.84□□□□□ -0.03
TRIM35-201ENST00000305364 CDC23Q9UJX2 597 aa14.84□□□□□ -0.03
TRIM35-201ENST00000305364 JRKLQ9Y4A0 524 aa14.84□□□□□ -0.03
TRIM35-201ENST00000305364 SLC12A7Q9Y666 1083 aa14.84□□□□□ -0.03
TRIM35-201ENST00000305364 ZBTB43O43298 467 aa14.84□□□□□ -0.03
TRIM35-201ENST00000305364 CCT6AP40227 531 aaKnown RBP14.84□□□□□ -0.03
TRIM35-201ENST00000305364 NBPF6Q5VWK0 638 aa14.84□□□□□ -0.03
TRIM35-201ENST00000305364 NBPF4Q96M43 638 aa14.84□□□□□ -0.03
TRIM35-201ENST00000305364 DSCC1Q9BVC3 393 aa14.84□□□□□ -0.03
TRIM35-201ENST00000305364 CDC42BPGQ6DT37 1551 aa14.83□□□□□ -0.03
TRIM35-201ENST00000305364 RNMTO43148 476 aaKnown RBP14.83□□□□□ -0.04
TRIM35-201ENST00000305364 KCNJ6P48051 423 aa14.83□□□□□ -0.04
TRIM35-201ENST00000305364 WASF1Q92558 559 aa14.83□□□□□ -0.04
TRIM35-201ENST00000305364 ABCB6Q9NP58 842 aa14.83□□□□□ -0.04
TRIM35-201ENST00000305364 TBC1D2BQ9UPU7 963 aa14.83□□□□□ -0.04
TRIM35-201ENST00000305364 IFIT3O14879 490 aaKnown RBP14.83□□□□□ -0.04
TRIM35-201ENST00000305364 TUBB4BP68371 445 aa14.83□□□□□ -0.04
TRIM35-201ENST00000305364 TSGA10IPQ3SY00 556 aa14.83□□□□□ -0.04
TRIM35-201ENST00000305364 MUM1L1Q5H9M0 696 aa14.83□□□□□ -0.04
TRIM35-201ENST00000305364 TMEM67Q5HYA8 995 aa14.83□□□□□ -0.04
TRIM35-201ENST00000305364 STOX1Q6ZVD7 989 aa14.83□□□□□ -0.04
TRIM35-201ENST00000305364 BPIFA3Q9BQP9 254 aa14.83□□□□□ -0.04
TRIM35-201ENST00000305364 FAM204AQ9H8W3 233 aa14.83□□□□□ -0.04
TRIM35-201ENST00000305364 CCDC181Q5TID7 509 aa14.83□□□□□ -0.04
TRIM35-201ENST00000305364 RGS22Q8NE09 1264 aa14.83□□□□□ -0.04
TRIM35-201ENST00000305364 CEP131Q9UPN4 1083 aa14.83□□□□□ -0.04
TRIM35-201ENST00000305364 ADD1P35611 737 aaKnown RBP14.82□□□□□ -0.04
TRIM35-201ENST00000305364 MATR3P43243 847 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRIM35-201ENST00000305364 EIF5P55010 431 aaKnown RBP14.82□□□□□ -0.04
TRIM35-201ENST00000305364 SLC39A14Q15043 492 aa14.82□□□□□ -0.04
TRIM35-201ENST00000305364 ICE2Q659A1 982 aa14.82□□□□□ -0.04
TRIM35-201ENST00000305364 HAUS7Q99871 368 aa14.82□□□□□ -0.04
TRIM35-201ENST00000305364 JADE2Q9NQC1 790 aa14.82□□□□□ -0.04
TRIM35-201ENST00000305364 KIF20BQ96Q89 1820 aa14.82□□□□□ -0.04
TRIM35-201ENST00000305364 SOWAHDA6NJG2 315 aa14.82□□□□□ -0.04
TRIM35-201ENST00000305364 POSTNQ15063 836 aa14.82□□□□□ -0.04
TRIM35-201ENST00000305364 E2F4Q16254 413 aa14.82□□□□□ -0.04
TRIM35-201ENST00000305364 KANK3Q6NY19 840 aa14.82□□□□□ -0.04
TRIM35-201ENST00000305364 MLKLQ8NB16 471 aa14.82□□□□□ -0.04
TRIM35-201ENST00000305364 TMX4Q9H1E5 349 aaPredicted RBP14.82□□□□□ -0.04
TRIM35-201ENST00000305364 MAGEC2Q9UBF1 373 aaPredicted RBP14.82□□□□□ -0.04
TRIM35-201ENST00000305364 MRFAP1Q9Y605 127 aa14.82□□□□□ -0.04
TRIM35-201ENST00000305364 NEURL1BA8MQ27 555 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 CUTAO60888 179 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 SASH3O75995 380 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 TUBBP07437 444 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 CTAGE1Q96RT6 745 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 USP6P35125 1406 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 KIDINS220Q9ULH0 1771 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 VWA3AA6NCI4 1184 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 ZRANB2O95218 330 aaKnown RBP eCLIP14.81□□□□□ -0.04
TRIM35-201ENST00000305364 CCDC93Q567U6 631 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 CNGA4Q8IV77 575 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 IFT172Q9UG01 1749 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 IQCEQ6IPM2 695 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 SLC35F6Q8N357 371 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 AIFM3Q96NN9 605 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 CTDNEP1O95476 244 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 MAP3K9P80192 1104 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 REXO1L1PQ8IX06 675 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 FAM76AQ8TAV0 307 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 FAM71BQ8TC56 605 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 C19orf44Q9H6X5 657 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 BRMS1Q9HCU9 246 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 SERTAD1Q9UHV2 236 aa14.81□□□□□ -0.04
TRIM35-201ENST00000305364 EIF3CLB5ME19 914 aaKnown RBP14.8□□□□□ -0.04
TRIM35-201ENST00000305364 CASP8Q14790 479 aa14.8□□□□□ -0.04
TRIM35-201ENST00000305364 EIF3CQ99613 913 aaKnown RBP14.8□□□□□ -0.04
TRIM35-201ENST00000305364 SLF1Q9BQI6 1058 aa14.8□□□□□ -0.04
TRIM35-201ENST00000305364 MYL10Q9BUA6 226 aa14.8□□□□□ -0.04
TRIM35-201ENST00000305364 TTF2Q9UNY4 1162 aaKnown RBP14.8□□□□□ -0.04
TRIM35-201ENST00000305364 FRMPD1Q5SYB0 1578 aa14.8□□□□□ -0.04
TRIM35-201ENST00000305364 KIF23Q02241 960 aaPredicted RBP14.8□□□□□ -0.04
TRIM35-201ENST00000305364 RNF187Q5TA31 235 aaPredicted RBP14.8□□□□□ -0.04
TRIM35-201ENST00000305364 AIDAQ96BJ3 306 aa14.8□□□□□ -0.04
TRIM35-201ENST00000305364 VPS16Q9H269 839 aa14.8□□□□□ -0.04
TRIM35-201ENST00000305364 LCMT1Q9UIC8 334 aa14.8□□□□□ -0.04
TRIM35-201ENST00000305364 LIG3P49916 1009 aa14.8□□□□□ -0.04
TRIM35-201ENST00000305364 CDR1P51861 262 aa14.8□□□□□ -0.04
TRIM35-201ENST00000305364 CTCFLQ8NI51 663 aaPredicted RBP14.8□□□□□ -0.04
TRIM35-201ENST00000305364 FUT8Q9BYC5 575 aa14.8□□□□□ -0.04
TRIM35-201ENST00000305364 SAMSN1Q9NSI8 373 aaKnown RBP14.8□□□□□ -0.04
TRIM35-201ENST00000305364 MED23Q9ULK4 1368 aa14.79□□□□□ -0.04
TRIM35-201ENST00000305364 MYO1BO43795 1136 aa14.79□□□□□ -0.04
TRIM35-201ENST00000305364 MAGEA9P43362 315 aa14.79□□□□□ -0.04
TRIM35-201ENST00000305364 SLC20A2Q08357 652 aa14.79□□□□□ -0.04
TRIM35-201ENST00000305364 GIMAP7Q8NHV1 300 aa14.79□□□□□ -0.04
TRIM35-201ENST00000305364 METTL22Q9BUU2 404 aaPredicted RBP14.79□□□□□ -0.04
TRIM35-201ENST00000305364 HECW2Q9P2P5 1572 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms