RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 HMG20BQ9P0W2 317 aa32.53■■■□□ 2.8
CDKN2A-201ENST00000304494 COG6Q9Y2V7 657 aa32.53■■■□□ 2.8
CDKN2A-201ENST00000304494 CDAN1Q8IWY9 1227 aa32.52■■■□□ 2.8
CDKN2A-201ENST00000304494 CLMNQ96JQ2 1002 aa32.52■■■□□ 2.8
CDKN2A-201ENST00000304494 RPAP1Q9BWH6 1393 aaPredicted RBP32.51■■■□□ 2.79
CDKN2A-201ENST00000304494 ZBTB48P10074 688 aaPredicted RBP32.51■■■□□ 2.79
CDKN2A-201ENST00000304494 TM4SF4P48230 202 aa32.51■■■□□ 2.79
CDKN2A-201ENST00000304494 CDC42EP5Q6NZY7 148 aa32.51■■■□□ 2.79
CDKN2A-201ENST00000304494 ERICH6Q7L0X2 663 aa32.51■■■□□ 2.79
CDKN2A-201ENST00000304494 AKAP11Q9UKA4 1901 aa32.51■■■□□ 2.79
CDKN2A-201ENST00000304494 CCDC158Q5M9N0 1113 aa32.5■■■□□ 2.79
CDKN2A-201ENST00000304494 ERC1Q8IUD2 1116 aa32.5■■■□□ 2.79
CDKN2A-201ENST00000304494 GAKO14976 1311 aa32.5■■■□□ 2.79
CDKN2A-201ENST00000304494 FAM151AQ8WW52 585 aa32.49■■■□□ 2.79
CDKN2A-201ENST00000304494 USP40Q9NVE5 1235 aa32.49■■■□□ 2.79
CDKN2A-201ENST00000304494 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.49■■■□□ 2.79
CDKN2A-201ENST00000304494 PDE3AQ14432 1141 aa32.48■■■□□ 2.79
CDKN2A-201ENST00000304494 TTC39AQ5SRH9 613 aa32.48■■■□□ 2.79
CDKN2A-201ENST00000304494 RPAP2Q8IXW5 612 aaPredicted RBP32.48■■■□□ 2.79
CDKN2A-201ENST00000304494 FAM163AQ96GL9 167 aaPredicted RBP32.48■■■□□ 2.79
CDKN2A-201ENST00000304494 WNK4Q96J92 1243 aa32.48■■■□□ 2.79
CDKN2A-201ENST00000304494 ZBTB40Q9NUA8 1239 aa32.48■■■□□ 2.79
CDKN2A-201ENST00000304494 MANSC4A6NHS7 340 aaPredicted RBP32.47■■■□□ 2.79
CDKN2A-201ENST00000304494 MCAMP43121 646 aa32.47■■■□□ 2.79
CDKN2A-201ENST00000304494 HSP90AB4PQ58FF6 505 aa32.47■■■□□ 2.79
CDKN2A-201ENST00000304494 DBNDD2Q9BQY9 259 aa32.47■■■□□ 2.79
CDKN2A-201ENST00000304494 INHBEP58166 350 aa32.46■■■□□ 2.79
CDKN2A-201ENST00000304494 PI16Q6UXB8 463 aa32.46■■■□□ 2.79
CDKN2A-201ENST00000304494 HMMRO75330 724 aa32.45■■■□□ 2.79
CDKN2A-201ENST00000304494 GSTO1P78417 241 aa32.45■■■□□ 2.79
CDKN2A-201ENST00000304494 MAP3K9P80192 1104 aa32.45■■■□□ 2.79
CDKN2A-201ENST00000304494 MECOMQ03112 1051 aa32.45■■■□□ 2.79
CDKN2A-201ENST00000304494 DCAF15Q66K64 600 aa32.45■■■□□ 2.79
CDKN2A-201ENST00000304494 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.45■■■□□ 2.79
CDKN2A-201ENST00000304494 CSADQ9Y600 493 aa32.45■■■□□ 2.79
CDKN2A-201ENST00000304494 MROH7-TTC4A0A0A0MT08 1334 aa32.45■■■□□ 2.78
CDKN2A-201ENST00000304494 ZNF512BQ96KM6 892 aaPredicted RBP32.44■■■□□ 2.78
CDKN2A-201ENST00000304494 EXOC6BQ9Y2D4 811 aa32.44■■■□□ 2.78
CDKN2A-201ENST00000304494 MYH2Q9UKX2 1941 aa32.43■■■□□ 2.78
CDKN2A-201ENST00000304494 TCP10Q12799 353 aa32.43■■■□□ 2.78
CDKN2A-201ENST00000304494 NFIAQ12857 509 aa32.43■■■□□ 2.78
CDKN2A-201ENST00000304494 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.43■■■□□ 2.78
CDKN2A-201ENST00000304494 ELP3Q9H9T3 547 aa32.43■■■□□ 2.78
CDKN2A-201ENST00000304494 OTOFQ9HC10 1997 aa32.43■■■□□ 2.78
CDKN2A-201ENST00000304494 LDHCP07864 332 aa32.42■■■□□ 2.78
CDKN2A-201ENST00000304494 VGLL4Q14135 290 aa32.42■■■□□ 2.78
CDKN2A-201ENST00000304494 TBC1D9Q6ZT07 1266 aa32.42■■■□□ 2.78
CDKN2A-201ENST00000304494 IDI2Q9BXS1 227 aa32.42■■■□□ 2.78
CDKN2A-201ENST00000304494 RAI14Q9P0K7 980 aa32.42■■■□□ 2.78
CDKN2A-201ENST00000304494 LRP2BPQ9P2M1 347 aa32.42■■■□□ 2.78
CDKN2A-201ENST00000304494 FAM198AQ9UFP1 575 aa32.42■■■□□ 2.78
CDKN2A-201ENST00000304494 DBNLQ9UJU6 430 aaKnown RBP32.42■■■□□ 2.78
CDKN2A-201ENST00000304494 ALDH1A1P00352 501 aa32.41■■■□□ 2.78
CDKN2A-201ENST00000304494 BTDP43251 543 aa32.41■■■□□ 2.78
CDKN2A-201ENST00000304494 NSUN4Q96CB9 384 aaKnown RBP32.41■■■□□ 2.78
CDKN2A-201ENST00000304494 EAF2Q96CJ1 260 aaPredicted RBP32.41■■■□□ 2.78
CDKN2A-201ENST00000304494 OPTNQ96CV9 577 aa32.41■■■□□ 2.78
CDKN2A-201ENST00000304494 ENTPD3O75355 529 aa32.4■■■□□ 2.78
CDKN2A-201ENST00000304494 WRNIP1Q96S55 665 aa32.4■■■□□ 2.78
CDKN2A-201ENST00000304494 ZNF341Q9BYN7 854 aa32.4■■■□□ 2.78
CDKN2A-201ENST00000304494 CCDC8Q9H0W5 538 aaPredicted RBP32.4■■■□□ 2.78
CDKN2A-201ENST00000304494 GPR75-ASB3A0A0A6YYF3 556 aa32.39■■■□□ 2.78
CDKN2A-201ENST00000304494 LAMB1P07942 1786 aa32.38■■■□□ 2.77
CDKN2A-201ENST00000304494 CAPN15O75808 1086 aa32.38■■■□□ 2.77
CDKN2A-201ENST00000304494 GJA5P36382 358 aa32.38■■■□□ 2.77
CDKN2A-201ENST00000304494 C20orf194Q5TEA3 1177 aa32.38■■■□□ 2.77
CDKN2A-201ENST00000304494 ZNF384Q8TF68 577 aa32.38■■■□□ 2.77
CDKN2A-201ENST00000304494 SNRKQ9NRH2 765 aa32.38■■■□□ 2.77
CDKN2A-201ENST00000304494 TLR7Q9NYK1 1049 aaKnown RBP32.38■■■□□ 2.77
CDKN2A-201ENST00000304494 IGSF3O75054 1194 aa32.37■■■□□ 2.77
CDKN2A-201ENST00000304494 TBC1D8O95759 1140 aa32.37■■■□□ 2.77
CDKN2A-201ENST00000304494 MAP4K4O95819 1239 aaPredicted RBP32.37■■■□□ 2.77
CDKN2A-201ENST00000304494 RGS3P49796 1198 aa32.37■■■□□ 2.77
CDKN2A-201ENST00000304494 IFNL1Q8IU54 200 aa32.37■■■□□ 2.77
CDKN2A-201ENST00000304494 RHPN1Q8TCX5 695 aa32.37■■■□□ 2.77
CDKN2A-201ENST00000304494 CFHR5Q9BXR6 569 aa32.37■■■□□ 2.77
CDKN2A-201ENST00000304494 CASP8AP2Q9UKL3 1982 aa32.36■■■□□ 2.77
CDKN2A-201ENST00000304494 RFX7Q2KHR2 1363 aa32.36■■■□□ 2.77
CDKN2A-201ENST00000304494 MIGA2Q7L4E1 593 aa32.36■■■□□ 2.77
CDKN2A-201ENST00000304494 AACSQ86V21 672 aa32.36■■■□□ 2.77
CDKN2A-201ENST00000304494 SIRT2Q8IXJ6 389 aa32.36■■■□□ 2.77
CDKN2A-201ENST00000304494 OTUD7BQ6GQQ9 843 aa32.35■■■□□ 2.77
CDKN2A-201ENST00000304494 KIF1BPQ96EK5 621 aa32.35■■■□□ 2.77
CDKN2A-201ENST00000304494 WDHD1O75717 1129 aaPredicted RBP32.34■■■□□ 2.77
CDKN2A-201ENST00000304494 CYP2E1P05181 493 aaPredicted RBP32.34■■■□□ 2.77
CDKN2A-201ENST00000304494 NOM1Q5C9Z4 860 aaKnown RBP32.34■■■□□ 2.77
CDKN2A-201ENST00000304494 ZKSCAN4Q969J2 545 aaPredicted RBP32.34■■■□□ 2.77
CDKN2A-201ENST00000304494 NOL10Q9BSC4 688 aaKnown RBP32.34■■■□□ 2.77
CDKN2A-201ENST00000304494 SNCAIPQ9Y6H5 919 aa32.34■■■□□ 2.77
CDKN2A-201ENST00000304494 SPDYE5A6NIY4 337 aa32.33■■■□□ 2.77
CDKN2A-201ENST00000304494 RAB11FIP3O75154 756 aa32.33■■■□□ 2.77
CDKN2A-201ENST00000304494 ZAP70P43403 619 aa32.33■■■□□ 2.77
CDKN2A-201ENST00000304494 RHBDL3P58872 404 aa32.33■■■□□ 2.77
CDKN2A-201ENST00000304494 NAA16Q6N069 864 aaPredicted RBP32.33■■■□□ 2.77
CDKN2A-201ENST00000304494 ZSCAN29Q8IWY8 852 aaPredicted RBP32.33■■■□□ 2.77
CDKN2A-201ENST00000304494 ZFPM1Q8IX07 1006 aa32.33■■■□□ 2.77
CDKN2A-201ENST00000304494 CLASRPQ8N2M8 674 aaKnown RBP32.33■■■□□ 2.77
CDKN2A-201ENST00000304494 OTUD5Q96G74 571 aa32.33■■■□□ 2.77
CDKN2A-201ENST00000304494 ABHD8Q96I13 439 aa32.33■■■□□ 2.77
CDKN2A-201ENST00000304494 TESPA1A2RU30 521 aaPredicted RBP32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms