RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 VEZTQ9HBM0 779 aa15.69■□□□□ 0.1
PRKCB-201ENST00000303531 MXRA7P84157 204 aa15.69■□□□□ 0.1
PRKCB-201ENST00000303531 PPM1EQ8WY54 764 aa15.69■□□□□ 0.1
PRKCB-201ENST00000303531 ARMT1Q9H993 441 aa15.69■□□□□ 0.1
PRKCB-201ENST00000303531 ZBTB21Q9ULJ3 1066 aa15.69■□□□□ 0.1
PRKCB-201ENST00000303531 SHANK2Q9UPX8 1470 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 SREK1Q8WXA9 508 aaKnown RBP15.68■□□□□ 0.1
PRKCB-201ENST00000303531 NOC4LQ9BVI4 516 aaKnown RBP15.68■□□□□ 0.1
PRKCB-201ENST00000303531 DENND2AQ9ULE3 1009 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 RTCBQ9Y3I0 505 aaKnown RBP15.68■□□□□ 0.1
PRKCB-201ENST00000303531 PPP2R3AQ06190 1150 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 AKNAD1Q5T1N1 836 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 PAXIP1Q6ZW49 1069 aaPredicted RBP15.68■□□□□ 0.1
PRKCB-201ENST00000303531 PNMA6EA0A0J9YXQ4 647 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 RIMBP2O15034 1052 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 TNNC1P63316 161 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 VPS16Q9H269 839 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 XAGE2Q96GT9 111 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 USP19O94966 1318 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 EBAG9O00559 213 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 CCDC121Q6ZUS5 278 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 ANGEL1Q9UNK9 670 aaKnown RBP15.68■□□□□ 0.1
PRKCB-201ENST00000303531 PLCD1P51178 756 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 CCDC6Q16204 474 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 MICALL1Q8N3F8 863 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 GTF3C6Q969F1 213 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 ATP6V0A2Q9Y487 856 aa15.68■□□□□ 0.1
PRKCB-201ENST00000303531 CHL1O00533 1208 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 HDXQ7Z353 690 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 FAM212AQ96EL1 285 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 BABAM1Q9NWV8 329 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 OGFRQ9NZT2 677 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 SAP30BPQ9UHR5 308 aaKnown RBP15.67■□□□□ 0.1
PRKCB-201ENST00000303531 TRAF5O00463 557 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 IGSF3O75054 1194 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 TUBBP07437 444 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 PIK3AP1Q6ZUJ8 805 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 ERO1AQ96HE7 468 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 TTC14Q96N46 770 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 OTUD7BQ6GQQ9 843 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 CCDC65Q8IXS2 484 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 TLDC2A0PJX2 215 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 DPH6Q7L8W6 267 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 CBX8Q9HC52 389 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 TEX14Q8IWB6 1497 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 NPC1L1Q9UHC9 1359 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 APPBP2Q92624 585 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 ZNF594Q96JF6 807 aaPredicted RBP15.67■□□□□ 0.1
PRKCB-201ENST00000303531 KIAA0556O60303 1618 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 PZPP20742 1482 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 GPAA1O43292 621 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 TBC1D8BQ0IIM8 1120 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 PUM3Q15397 648 aaKnown RBP15.67■□□□□ 0.1
PRKCB-201ENST00000303531 CCDC25Q86WR0 208 aa15.67■□□□□ 0.1
PRKCB-201ENST00000303531 LEO1Q8WVC0 666 aaPredicted RBP15.67■□□□□ 0.1
PRKCB-201ENST00000303531 ABCC10Q5T3U5 1492 aa15.66■□□□□ 0.1
PRKCB-201ENST00000303531 RPL13P26373 211 aaKnown RBP15.66■□□□□ 0.1
PRKCB-201ENST00000303531 PDE4DQ08499 809 aa15.66■□□□□ 0.1
PRKCB-201ENST00000303531 WDR62O43379 1518 aa15.66■□□□□ 0.1
PRKCB-201ENST00000303531 SBNO1A3KN83 1393 aa15.66■□□□□ 0.1
PRKCB-201ENST00000303531 POLR2DO15514 142 aaKnown RBP15.66■□□□□ 0.1
PRKCB-201ENST00000303531 GADD45BO75293 160 aaPredicted RBP15.66■□□□□ 0.1
PRKCB-201ENST00000303531 FANCCQ00597 558 aa15.66■□□□□ 0.1
PRKCB-201ENST00000303531 C19orf44Q9H6X5 657 aa15.66■□□□□ 0.1
PRKCB-201ENST00000303531 UHRF1BP1Q6BDS2 1440 aa15.66■□□□□ 0.1
PRKCB-201ENST00000303531 ZNF75DP51815 510 aa15.66■□□□□ 0.1
PRKCB-201ENST00000303531 HOXB7P09629 217 aa15.66■□□□□ 0.1
PRKCB-201ENST00000303531 U2AF2P26368 475 aaKnown RBP eCLIP15.66■□□□□ 0.12e-8■■■■□ 22.1
PRKCB-201ENST00000303531 CPLX4Q7Z7G2 160 aa15.66■□□□□ 0.1
PRKCB-201ENST00000303531 TMEM87AQ8NBN3 555 aa15.66■□□□□ 0.1
PRKCB-201ENST00000303531 MTRF1LQ9UGC7 380 aaKnown RBP15.66■□□□□ 0.1
PRKCB-201ENST00000303531 EDC4Q6P2E9 1401 aaKnown RBP15.66■□□□□ 0.1
PRKCB-201ENST00000303531 DTNBO60941 627 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 PPP1R7Q15435 360 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 SUCLG2Q96I99 432 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 MAPK8IP1Q9UQF2 711 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 V9GY48 417 aaPredicted RBP15.65■□□□□ 0.1
PRKCB-201ENST00000303531 KCNA6P17658 529 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 ZNF445P59923 1031 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 CFAP58Q5T655 872 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 OTUD6BQ8N6M0 293 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 FAM76AQ8TAV0 307 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 C8orf37Q96NL8 207 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 SYNRGQ9UMZ2 1314 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 DIS3L2Q8IYB7 885 aaKnown RBP15.65■□□□□ 0.1
PRKCB-201ENST00000303531 ARFGAP2Q8N6H7 521 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 CCDC63Q8NA47 563 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 RRAGDQ9NQL2 400 aaPredicted RBP15.65■□□□□ 0.1
PRKCB-201ENST00000303531 TRIM14Q14142 442 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 CDC37L1Q7L3B6 337 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 NDUFB9Q9Y6M9 179 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 PPP1R2P41236 205 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 ZBTB16Q05516 673 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 TTC6Q86TZ1 520 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 NAPGQ99747 312 aaPredicted RBP15.65■□□□□ 0.1
PRKCB-201ENST00000303531 CUTAO60888 179 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 ZNF354CQ86Y25 554 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 TEX11Q8IYF3 940 aa15.65■□□□□ 0.1
PRKCB-201ENST00000303531 C17orf53Q8N3J3 647 aaPredicted RBP15.65■□□□□ 0.1
PRKCB-201ENST00000303531 NAP1L4Q99733 375 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms