RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 NSUN4Q96CB9 384 aaKnown RBP17.06■□□□□ 0.32
SHCBP1-201ENST00000303383 GOLGA8BA8MQT2 603 aa17.06■□□□□ 0.32
SHCBP1-201ENST00000303383 SLC51AQ86UW1 340 aa17.06■□□□□ 0.32
SHCBP1-201ENST00000303383 CRNKL1Q9BZJ0 848 aaKnown RBP17.06■□□□□ 0.32
SHCBP1-201ENST00000303383 AATFQ9NY61 560 aaKnown RBP eCLIP17.06■□□□□ 0.32
SHCBP1-201ENST00000303383 SART3Q15020 963 aaKnown RBP17.06■□□□□ 0.32
SHCBP1-201ENST00000303383 AKNAD1Q5T1N1 836 aa17.06■□□□□ 0.32
SHCBP1-201ENST00000303383 CHAMP1Q96JM3 812 aa17.06■□□□□ 0.32
SHCBP1-201ENST00000303383 LAMA4Q16363 1823 aa17.06■□□□□ 0.32
SHCBP1-201ENST00000303383 JAK2O60674 1132 aa17.05■□□□□ 0.32
SHCBP1-201ENST00000303383 HMGN5P82970 282 aaKnown RBP17.05■□□□□ 0.32
SHCBP1-201ENST00000303383 FBXO41Q8TF61 875 aa17.05■□□□□ 0.32
SHCBP1-201ENST00000303383 LLPHQ9BRT6 129 aaKnown RBP17.05■□□□□ 0.32
SHCBP1-201ENST00000303383 AGXT2Q9BYV1 514 aa17.05■□□□□ 0.32
SHCBP1-201ENST00000303383 ERICH2A1L162 156 aa17.05■□□□□ 0.32
SHCBP1-201ENST00000303383 PDIA3P30101 505 aaKnown RBP17.05■□□□□ 0.32
SHCBP1-201ENST00000303383 MYH13Q9UKX3 1938 aa17.05■□□□□ 0.32
SHCBP1-201ENST00000303383 GSTO1P78417 241 aa17.05■□□□□ 0.32
SHCBP1-201ENST00000303383 SLC15A2Q16348 729 aa17.05■□□□□ 0.32
SHCBP1-201ENST00000303383 NCOA5Q9HCD5 579 aaKnown RBP17.05■□□□□ 0.32
SHCBP1-201ENST00000303383 GPHNQ9NQX3 736 aaPredicted RBP17.05■□□□□ 0.32
SHCBP1-201ENST00000303383 ANGEL1Q9UNK9 670 aaKnown RBP17.05■□□□□ 0.32
SHCBP1-201ENST00000303383 KDM4AO75164 1064 aa17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 SP8Q8IXZ3 490 aa17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 TDRD7Q8NHU6 1098 aaKnown RBP17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 FBXW7Q969H0 707 aa17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 MTMR6Q9Y217 621 aa17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 WDR19Q8NEZ3 1342 aa17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 BAG6P46379 1132 aa17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 PPARAQ07869 468 aa17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 TMEM67Q5HYA8 995 aa17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 SYNE3Q6ZMZ3 975 aa17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 TMEM87BQ96K49 555 aa17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 CD209Q9NNX6 404 aa17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 LMBRD1Q9NUN5 540 aa17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 KLRG2A4D1S0 409 aaPredicted RBP17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 IFIT3O14879 490 aaKnown RBP17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 SRGNP10124 158 aa17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 FERMT3Q86UX7 667 aa17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 TBC1D16Q8TBP0 767 aa17.04■□□□□ 0.32
SHCBP1-201ENST00000303383 RIMBP2O15034 1052 aa17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 LDHCP07864 332 aa17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 CSPP1Q1MSJ5 1256 aa17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 KLHL40Q2TBA0 621 aa17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 TPRNQ4KMQ1 711 aa17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 TMED8Q6PL24 325 aaPredicted RBP17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 MASTLQ96GX5 879 aa17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 RIOK1Q9BRS2 568 aaKnown RBP17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 NBPF3Q9H094 633 aa17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 NEDD4P46934 1319 aa17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 PTPDC1A2A3K4 754 aa17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 FOSBP53539 338 aa17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 ANTXR2P58335 489 aa17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 CPLX2Q6PUV4 134 aaKnown RBP17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 RAB11FIP4Q86YS3 637 aa17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 MPNDQ8N594 471 aa17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 ZC3H12CQ9C0D7 883 aaKnown RBP17.03■□□□□ 0.32
SHCBP1-201ENST00000303383 C15orf52Q6ZUT6 534 aaKnown RBP17.02■□□□□ 0.32
SHCBP1-201ENST00000303383 GDPD2Q9HCC8 539 aa17.02■□□□□ 0.32
SHCBP1-201ENST00000303383 ATP6V0A2Q9Y487 856 aa17.02■□□□□ 0.32
SHCBP1-201ENST00000303383 CCDC69A6NI79 296 aa17.02■□□□□ 0.32
SHCBP1-201ENST00000303383 H0YIN7 160 aa17.02■□□□□ 0.32
SHCBP1-201ENST00000303383 BAG3O95817 575 aa17.02■□□□□ 0.32
SHCBP1-201ENST00000303383 DPP8Q6V1X1 898 aaPredicted RBP17.02■□□□□ 0.32
SHCBP1-201ENST00000303383 CYB5R4Q7L1T6 521 aa17.02■□□□□ 0.32
SHCBP1-201ENST00000303383 FBXL16Q8N461 479 aa17.02■□□□□ 0.32
SHCBP1-201ENST00000303383 INCENPQ9NQS7 918 aa17.02■□□□□ 0.32
SHCBP1-201ENST00000303383 C2CD5Q86YS7 1000 aa17.02■□□□□ 0.31
SHCBP1-201ENST00000303383 POLLQ9UGP5 575 aa17.02■□□□□ 0.31
SHCBP1-201ENST00000303383 FIBPO43427 364 aa17.01■□□□□ 0.31
SHCBP1-201ENST00000303383 PPFIA3O75145 1194 aa17.01■□□□□ 0.31
SHCBP1-201ENST00000303383 SLC3A2P08195 630 aaKnown RBP17.01■□□□□ 0.31
SHCBP1-201ENST00000303383 USP5P45974 858 aa17.01■□□□□ 0.31
SHCBP1-201ENST00000303383 NSUN7Q8NE18 718 aaKnown RBP17.01■□□□□ 0.31
SHCBP1-201ENST00000303383 STAG1Q8WVM7 1258 aa17.01■□□□□ 0.31
SHCBP1-201ENST00000303383 UBAC1Q9BSL1 405 aa17.01■□□□□ 0.31
SHCBP1-201ENST00000303383 CDC37L1Q7L3B6 337 aa17.01■□□□□ 0.31
SHCBP1-201ENST00000303383 AMOTL1Q8IY63 956 aa17.01■□□□□ 0.31
SHCBP1-201ENST00000303383 MBD3O95983 291 aa17.01■□□□□ 0.31
SHCBP1-201ENST00000303383 CAVIN1Q6NZI2 390 aaKnown RBP17.01■□□□□ 0.31
SHCBP1-201ENST00000303383 ESR2Q92731 530 aa17.01■□□□□ 0.31
SHCBP1-201ENST00000303383 CAMKK2Q96RR4 588 aa17.01■□□□□ 0.31
SHCBP1-201ENST00000303383 ZSWIM5Q9P217 1185 aa17.01■□□□□ 0.31
SHCBP1-201ENST00000303383 METAP2P50579 478 aaKnown RBP eCLIP17■□□□□ 0.31
SHCBP1-201ENST00000303383 BRPF3Q9ULD4 1205 aa17■□□□□ 0.31
SHCBP1-201ENST00000303383 CNPY2Q9Y2B0 182 aa17■□□□□ 0.31
SHCBP1-201ENST00000303383 SALL1Q9NSC2 1324 aa17■□□□□ 0.31
SHCBP1-201ENST00000303383 IRS2Q9Y4H2 1338 aa17■□□□□ 0.31
SHCBP1-201ENST00000303383 MICU3Q86XE3 530 aa17■□□□□ 0.31
SHCBP1-201ENST00000303383 SLC12A7Q9Y666 1083 aa17■□□□□ 0.31
SHCBP1-201ENST00000303383 SH2B2O14492 632 aaPredicted RBP17■□□□□ 0.31
SHCBP1-201ENST00000303383 MFSD14BQ5SR56 506 aa17■□□□□ 0.31
SHCBP1-201ENST00000303383 GIMAP6Q6P9H5 292 aa17■□□□□ 0.31
SHCBP1-201ENST00000303383 ZNF384Q8TF68 577 aa17■□□□□ 0.31
SHCBP1-201ENST00000303383 TBC1D22AQ8WUA7 517 aa17■□□□□ 0.31
SHCBP1-201ENST00000303383 ATP8A2Q9NTI2 1148 aa17■□□□□ 0.31
SHCBP1-201ENST00000303383 ZBTB4Q9P1Z0 1013 aaPredicted RBP17■□□□□ 0.31
SHCBP1-201ENST00000303383 TAOK2Q9UL54 1235 aa17■□□□□ 0.31
SHCBP1-201ENST00000303383 GOLGA6L3A6NEY3 463 aa16.99■□□□□ 0.31
SHCBP1-201ENST00000303383 USP17L12C9JPN9 530 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms