RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 JAG2Q9Y219 1238 aa23.73■■□□□ 1.39
LETM1-201ENST00000302787 PUM3Q15397 648 aaKnown RBP23.73■■□□□ 1.39
LETM1-201ENST00000302787 NBPF11Q86T75 865 aa23.73■■□□□ 1.39
LETM1-201ENST00000302787 IFT81Q8WYA0 676 aa23.73■■□□□ 1.39
LETM1-201ENST00000302787 FERMT1Q9BQL6 677 aa23.73■■□□□ 1.39
LETM1-201ENST00000302787 CCDC77Q9BR77 488 aa23.73■■□□□ 1.39
LETM1-201ENST00000302787 PODXL2Q9NZ53 605 aa23.73■■□□□ 1.39
LETM1-201ENST00000302787 NSFL1CQ9UNZ2 370 aaKnown RBP23.73■■□□□ 1.39
LETM1-201ENST00000302787 CUTAO60888 179 aa23.72■■□□□ 1.39
LETM1-201ENST00000302787 KIF4AO95239 1232 aa23.72■■□□□ 1.39
LETM1-201ENST00000302787 SV2BQ7L1I2 683 aa23.72■■□□□ 1.39
LETM1-201ENST00000302787 HS2ST1Q7LGA3 356 aa23.72■■□□□ 1.39
LETM1-201ENST00000302787 STMN4Q9H169 189 aaPredicted RBP23.72■■□□□ 1.39
LETM1-201ENST00000302787 TBX22Q9Y458 520 aa23.72■■□□□ 1.39
LETM1-201ENST00000302787 ABCC4O15439 1325 aa23.72■■□□□ 1.39
LETM1-201ENST00000302787 PLCD1P51178 756 aa23.72■■□□□ 1.39
LETM1-201ENST00000302787 VAV2P52735 878 aa23.72■■□□□ 1.39
LETM1-201ENST00000302787 HDXQ7Z353 690 aa23.72■■□□□ 1.39
LETM1-201ENST00000302787 HDAC9Q9UKV0 1011 aa23.72■■□□□ 1.39
LETM1-201ENST00000302787 RIOK3O14730 519 aaKnown RBP23.72■■□□□ 1.39
LETM1-201ENST00000302787 LETM2Q2VYF4 491 aa23.72■■□□□ 1.39
LETM1-201ENST00000302787 KIAA0232Q92628 1395 aa23.71■■□□□ 1.39
LETM1-201ENST00000302787 PAIP2Q9BPZ3 127 aaKnown RBP23.71■■□□□ 1.39
LETM1-201ENST00000302787 C17orf53Q8N3J3 647 aaPredicted RBP23.71■■□□□ 1.39
LETM1-201ENST00000302787 BRD1O95696 1058 aa23.71■■□□□ 1.39
LETM1-201ENST00000302787 PPP1R14CQ8TAE6 165 aa23.71■■□□□ 1.39
LETM1-201ENST00000302787 IPO4Q8TEX9 1081 aaKnown RBP23.71■■□□□ 1.39
LETM1-201ENST00000302787 VPS16Q9H269 839 aa23.71■■□□□ 1.39
LETM1-201ENST00000302787 PPP1R9BQ96SB3 815 aa23.7■■□□□ 1.39
LETM1-201ENST00000302787 NOC4LQ9BVI4 516 aaKnown RBP23.7■■□□□ 1.39
LETM1-201ENST00000302787 ATP7AQ04656 1500 aa23.7■■□□□ 1.38
LETM1-201ENST00000302787 GSPT1P15170 499 aaKnown RBP23.7■■□□□ 1.38
LETM1-201ENST00000302787 NLRP12P59046 1061 aa23.7■■□□□ 1.38
LETM1-201ENST00000302787 TRIM14Q14142 442 aa23.7■■□□□ 1.38
LETM1-201ENST00000302787 DIS3L2Q8IYB7 885 aaKnown RBP23.7■■□□□ 1.38
LETM1-201ENST00000302787 GTF3C6Q969F1 213 aa23.7■■□□□ 1.38
LETM1-201ENST00000302787 MPHOSPH6Q99547 160 aaKnown RBP23.7■■□□□ 1.38
LETM1-201ENST00000302787 DTNBO60941 627 aa23.7■■□□□ 1.38
LETM1-201ENST00000302787 C6orf163Q5TEZ5 329 aa23.7■■□□□ 1.38
LETM1-201ENST00000302787 NDUFB9Q9Y6M9 179 aa23.7■■□□□ 1.38
LETM1-201ENST00000302787 POLR2DO15514 142 aaKnown RBP23.7■■□□□ 1.38
LETM1-201ENST00000302787 PPP1R2P41236 205 aa23.7■■□□□ 1.38
LETM1-201ENST00000302787 PIK3AP1Q6ZUJ8 805 aa23.7■■□□□ 1.38
LETM1-201ENST00000302787 ZNF202O95125 648 aa23.7■■□□□ 1.38
LETM1-201ENST00000302787 GCKRQ14397 625 aa23.7■■□□□ 1.38
LETM1-201ENST00000302787 DISP1Q96F81 1524 aa23.7■■□□□ 1.38
LETM1-201ENST00000302787 ZC3H12CQ9C0D7 883 aaKnown RBP23.69■■□□□ 1.38
LETM1-201ENST00000302787 GJC1P36383 396 aa23.69■■□□□ 1.38
LETM1-201ENST00000302787 TNNC1P63316 161 aa23.69■■□□□ 1.38
LETM1-201ENST00000302787 GPATCH11Q8N954 259 aa23.69■■□□□ 1.38
LETM1-201ENST00000302787 SLC52A2Q9HAB3 445 aa23.69■■□□□ 1.38
LETM1-201ENST00000302787 TMEM63CQ9P1W3 806 aa23.69■■□□□ 1.38
LETM1-201ENST00000302787 U2AF2P26368 475 aaKnown RBP eCLIP23.69■■□□□ 1.38
LETM1-201ENST00000302787 RTCBQ9Y3I0 505 aaKnown RBP23.69■■□□□ 1.38
LETM1-201ENST00000302787 V9GY48 417 aaPredicted RBP23.69■■□□□ 1.38
LETM1-201ENST00000302787 JAK2O60674 1132 aa23.69■■□□□ 1.38
LETM1-201ENST00000302787 IGSF3O75054 1194 aa23.69■■□□□ 1.38
LETM1-201ENST00000302787 SELENOSQ9BQE4 189 aa23.69■■□□□ 1.38
LETM1-201ENST00000302787 ARHGEF10O15013 1369 aa23.68■■□□□ 1.38
LETM1-201ENST00000302787 SYNRGQ9UMZ2 1314 aa23.68■■□□□ 1.38
LETM1-201ENST00000302787 PLXNC1O60486 1568 aa23.68■■□□□ 1.38
LETM1-201ENST00000302787 WDHD1O75717 1129 aaPredicted RBP23.68■■□□□ 1.38
LETM1-201ENST00000302787 IMPACTQ9P2X3 320 aa23.68■■□□□ 1.38
LETM1-201ENST00000302787 ABCC2Q92887 1545 aa23.68■■□□□ 1.38
LETM1-201ENST00000302787 PDE4DQ08499 809 aa23.68■■□□□ 1.38
LETM1-201ENST00000302787 TBC1D8BQ0IIM8 1120 aa23.68■■□□□ 1.38
LETM1-201ENST00000302787 GSTA5Q7RTV2 222 aa23.68■■□□□ 1.38
LETM1-201ENST00000302787 CCDC65Q8IXS2 484 aa23.68■■□□□ 1.38
LETM1-201ENST00000302787 NAPGQ99747 312 aaPredicted RBP23.68■■□□□ 1.38
LETM1-201ENST00000302787 TM6SF1Q9BZW5 370 aa23.68■■□□□ 1.38
LETM1-201ENST00000302787 EBAG9O00559 213 aa23.68■■□□□ 1.38
LETM1-201ENST00000302787 GRIPAP1Q4V328 841 aa23.68■■□□□ 1.38
LETM1-201ENST00000302787 OGFOD1Q8N543 542 aa23.68■■□□□ 1.38
LETM1-201ENST00000302787 NAP1L4Q99733 375 aaKnown RBP23.68■■□□□ 1.38
LETM1-201ENST00000302787 TTF2Q9UNY4 1162 aaKnown RBP23.68■■□□□ 1.38
LETM1-201ENST00000302787 EEF2P13639 858 aaKnown RBP23.67■■□□□ 1.38
LETM1-201ENST00000302787 CYP26C1Q6V0L0 522 aa23.67■■□□□ 1.38
LETM1-201ENST00000302787 MLKLQ8NB16 471 aa23.67■■□□□ 1.38
LETM1-201ENST00000302787 IQCGQ9H095 443 aaKnown RBP23.67■■□□□ 1.38
LETM1-201ENST00000302787 PDE8AO60658 829 aa23.67■■□□□ 1.38
LETM1-201ENST00000302787 DNAJC21Q5F1R6 531 aaKnown RBP23.67■■□□□ 1.38
LETM1-201ENST00000302787 IMPG2Q9BZV3 1241 aa23.67■■□□□ 1.38
LETM1-201ENST00000302787 TRAF5O00463 557 aa23.67■■□□□ 1.38
LETM1-201ENST00000302787 TSNARE1Q96NA8 513 aa23.67■■□□□ 1.38
LETM1-201ENST00000302787 RAPGEF1Q13905 1077 aa23.66■■□□□ 1.38
LETM1-201ENST00000302787 DCAF17Q5H9S7 520 aaPredicted RBP23.66■■□□□ 1.38
LETM1-201ENST00000302787 SAP30BPQ9UHR5 308 aaKnown RBP23.66■■□□□ 1.38
LETM1-201ENST00000302787 KDM5AP29375 1690 aaKnown RBP23.66■■□□□ 1.38
LETM1-201ENST00000302787 RPL13P26373 211 aaKnown RBP23.66■■□□□ 1.38
LETM1-201ENST00000302787 EIF4A1P60842 406 aaKnown RBP23.66■■□□□ 1.38
LETM1-201ENST00000302787 ANKS4BQ8N8V4 417 aa23.66■■□□□ 1.38
LETM1-201ENST00000302787 MYRIPQ8NFW9 859 aa23.66■■□□□ 1.38
LETM1-201ENST00000302787 FBF1Q8TES7 1133 aa23.66■■□□□ 1.38
LETM1-201ENST00000302787 ZEB2O60315 1214 aa23.66■■□□□ 1.38
LETM1-201ENST00000302787 MICALL1Q8N3F8 863 aa23.66■■□□□ 1.38
LETM1-201ENST00000302787 SH3TC1Q8TE82 1336 aa23.66■■□□□ 1.38
LETM1-201ENST00000302787 CCDC121Q6ZUS5 278 aa23.66■■□□□ 1.38
LETM1-201ENST00000302787 CCDC50Q8IVM0 306 aa23.66■■□□□ 1.38
LETM1-201ENST00000302787 FAM76AQ8TAV0 307 aa23.66■■□□□ 1.38
LETM1-201ENST00000302787 KRT40Q6A162 431 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms