RNA–Protein interactions for RNA: ENST00000302536.2

VAT1L-201, Transcript of vesicle amine transport 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1L, Length 3,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-201ENST00000302536 CHRNDQ07001 517 aa14.84□□□□□ -0.03
VAT1L-201ENST00000302536 SCRN1Q12765 414 aa14.84□□□□□ -0.03
VAT1L-201ENST00000302536 RASGRF1Q13972 1273 aa14.84□□□□□ -0.03
VAT1L-201ENST00000302536 TBC1D9BQ66K14 1250 aa14.84□□□□□ -0.03
VAT1L-201ENST00000302536 DHX32Q7L7V1 743 aaKnown RBP14.84□□□□□ -0.03
VAT1L-201ENST00000302536 CPLX3Q8WVH0 158 aa14.84□□□□□ -0.03
VAT1L-201ENST00000302536 SETDB2Q96T68 719 aa14.84□□□□□ -0.03
VAT1L-201ENST00000302536 ZNF652Q9Y2D9 606 aa14.84□□□□□ -0.03
VAT1L-201ENST00000302536 ERCC6LQ2NKX8 1250 aa14.83□□□□□ -0.03
VAT1L-201ENST00000302536 CFAP100Q494V2 611 aa14.83□□□□□ -0.03
VAT1L-201ENST00000302536 ZNF397Q8NF99 534 aaPredicted RBP14.83□□□□□ -0.03
VAT1L-201ENST00000302536 MED23Q9ULK4 1368 aa14.83□□□□□ -0.04
VAT1L-201ENST00000302536 PRDM1O75626 825 aa14.83□□□□□ -0.04
VAT1L-201ENST00000302536 GTF2A1P52655 376 aaPredicted RBP14.83□□□□□ -0.04
VAT1L-201ENST00000302536 SNW1Q13573 536 aaKnown RBP14.83□□□□□ -0.04
VAT1L-201ENST00000302536 PUM3Q15397 648 aaKnown RBP14.83□□□□□ -0.04
VAT1L-201ENST00000302536 LRRFIP1Q32MZ4 808 aaKnown RBP14.83□□□□□ -0.04
VAT1L-201ENST00000302536 KRBA2Q6ZNG9 492 aa14.83□□□□□ -0.04
VAT1L-201ENST00000302536 ANKRD18AQ8IVF6 992 aa14.83□□□□□ -0.04
VAT1L-201ENST00000302536 CMTR1Q8N1G2 835 aaKnown RBP14.83□□□□□ -0.04
VAT1L-201ENST00000302536 NUP133Q8WUM0 1156 aa14.83□□□□□ -0.04
VAT1L-201ENST00000302536 NAPBQ9H115 298 aa14.83□□□□□ -0.04
VAT1L-201ENST00000302536 USP54Q70EL1 1684 aa14.83□□□□□ -0.04
VAT1L-201ENST00000302536 RPAP1Q9BWH6 1393 aaPredicted RBP14.83□□□□□ -0.04
VAT1L-201ENST00000302536 CIAO1O76071 339 aa14.83□□□□□ -0.04
VAT1L-201ENST00000302536 CAMTA2O94983 1202 aa14.83□□□□□ -0.04
VAT1L-201ENST00000302536 CSF1RP07333 972 aa14.83□□□□□ -0.04
VAT1L-201ENST00000302536 SFPQP23246 707 aaKnown RBP eCLIP14.83□□□□□ -0.04
VAT1L-201ENST00000302536 SDR42E1Q8WUS8 393 aa14.83□□□□□ -0.04
VAT1L-201ENST00000302536 ANKRD7Q92527 254 aa14.83□□□□□ -0.04
VAT1L-201ENST00000302536 PTPDC1A2A3K4 754 aa14.82□□□□□ -0.04
VAT1L-201ENST00000302536 KMT5BQ4FZB7 885 aa14.82□□□□□ -0.04
VAT1L-201ENST00000302536 SPATA5Q8NB90 893 aa14.82□□□□□ -0.04
VAT1L-201ENST00000302536 APPBP2Q92624 585 aa14.82□□□□□ -0.04
VAT1L-201ENST00000302536 CELF1Q92879 486 aaKnown RBP14.82□□□□□ -0.04
VAT1L-201ENST00000302536 HELLSQ9NRZ9 838 aa14.82□□□□□ -0.04
VAT1L-201ENST00000302536 CCDC69A6NI79 296 aa14.82□□□□□ -0.04
VAT1L-201ENST00000302536 PDE6AP16499 860 aa14.82□□□□□ -0.04
VAT1L-201ENST00000302536 RFC4P35249 363 aa14.82□□□□□ -0.04
VAT1L-201ENST00000302536 STK38Q15208 465 aa14.82□□□□□ -0.04
VAT1L-201ENST00000302536 TM6SF1Q9BZW5 370 aa14.82□□□□□ -0.04
VAT1L-201ENST00000302536 AP5Z1O43299 807 aa14.82□□□□□ -0.04
VAT1L-201ENST00000302536 CYP7A1P22680 504 aa14.82□□□□□ -0.04
VAT1L-201ENST00000302536 HSP90B2PQ58FF3 399 aa14.82□□□□□ -0.04
VAT1L-201ENST00000302536 FBXO38Q6PIJ6 1188 aa14.82□□□□□ -0.04
VAT1L-201ENST00000302536 ZNF219Q9P2Y4 722 aaPredicted RBP14.82□□□□□ -0.04
VAT1L-201ENST00000302536 XIRP1Q702N8 1843 aaKnown RBP14.82□□□□□ -0.04
VAT1L-201ENST00000302536 KCPQ6ZWJ8 1503 aa14.82□□□□□ -0.04
VAT1L-201ENST00000302536 SMIM22K7EJ46 135 aa14.81□□□□□ -0.04
VAT1L-201ENST00000302536 TRIM28Q13263 835 aaKnown RBP14.81□□□□□ -0.04
VAT1L-201ENST00000302536 ZNF34Q8IZ26 560 aa14.81□□□□□ -0.04
VAT1L-201ENST00000302536 AOPEPQ8N6M6 819 aa14.81□□□□□ -0.04
VAT1L-201ENST00000302536 ANKIB1Q9P2G1 1089 aa14.81□□□□□ -0.04
VAT1L-201ENST00000302536 LMOD1P29536 600 aaPredicted RBP14.81□□□□□ -0.04
VAT1L-201ENST00000302536 MAP3K12Q12852 859 aa14.81□□□□□ -0.04
VAT1L-201ENST00000302536 LEKR1Q6ZMV7 388 aa14.81□□□□□ -0.04
VAT1L-201ENST00000302536 LPIN2Q92539 896 aa14.81□□□□□ -0.04
VAT1L-201ENST00000302536 SPTLC3Q9NUV7 552 aa14.81□□□□□ -0.04
VAT1L-201ENST00000302536 CBX8Q9HC52 389 aa14.81□□□□□ -0.04
VAT1L-201ENST00000302536 SLC4A4Q9Y6R1 1079 aa14.81□□□□□ -0.04
VAT1L-201ENST00000302536 CYP2D7A0A087X1C5 515 aa14.8□□□□□ -0.04
VAT1L-201ENST00000302536 KLRK1P26718 216 aa14.8□□□□□ -0.04
VAT1L-201ENST00000302536 AMIGO3Q86WK7 504 aa14.8□□□□□ -0.04
VAT1L-201ENST00000302536 SMARCC1Q92922 1105 aaPredicted RBP14.8□□□□□ -0.04
VAT1L-201ENST00000302536 CDCA7Q9BWT1 371 aaPredicted RBP14.8□□□□□ -0.04
VAT1L-201ENST00000302536 RTCBQ9Y3I0 505 aaKnown RBP14.8□□□□□ -0.04
VAT1L-201ENST00000302536 EP400Q96L91 3159 aa14.8□□□□□ -0.04
VAT1L-201ENST00000302536 GYS2P54840 703 aa14.8□□□□□ -0.04
VAT1L-201ENST00000302536 FAM196AQ6ZSG2 479 aa14.8□□□□□ -0.04
VAT1L-201ENST00000302536 AK7Q96M32 723 aa14.8□□□□□ -0.04
VAT1L-201ENST00000302536 AIFM3Q96NN9 605 aa14.8□□□□□ -0.04
VAT1L-201ENST00000302536 PAXBP1Q9Y5B6 917 aa14.8□□□□□ -0.04
VAT1L-201ENST00000302536 CAPN2P17655 700 aa14.8□□□□□ -0.04
VAT1L-201ENST00000302536 PDCP20941 246 aa14.8□□□□□ -0.04
VAT1L-201ENST00000302536 AXDND1Q5T1B0 1012 aaPredicted RBP14.8□□□□□ -0.04
VAT1L-201ENST00000302536 PHKBQ93100 1093 aa14.8□□□□□ -0.04
VAT1L-201ENST00000302536 MRC1P22897 1456 aa14.8□□□□□ -0.04
VAT1L-201ENST00000302536 hCG_1642624A0A1W2PR95 340 aa14.79□□□□□ -0.04
VAT1L-201ENST00000302536 SYNE3Q6ZMZ3 975 aa14.79□□□□□ -0.04
VAT1L-201ENST00000302536 NOC3LQ8WTT2 800 aaKnown RBP14.79□□□□□ -0.04
VAT1L-201ENST00000302536 SENP2Q9HC62 589 aa14.79□□□□□ -0.04
VAT1L-201ENST00000302536 AFDNP55196 1824 aaKnown RBP14.79□□□□□ -0.04
VAT1L-201ENST00000302536 TTC6Q86TZ1 520 aa14.79□□□□□ -0.04
VAT1L-201ENST00000302536 CEP57L1Q8IYX8 460 aa14.79□□□□□ -0.04
VAT1L-201ENST00000302536 CDC5LQ99459 802 aaKnown RBP14.79□□□□□ -0.04
VAT1L-201ENST00000302536 ADD1P35611 737 aaKnown RBP14.79□□□□□ -0.04
VAT1L-201ENST00000302536 ZCCHC17Q9NP64 241 aaKnown RBP14.79□□□□□ -0.04
VAT1L-201ENST00000302536 GPR108Q9NPR9 543 aa14.79□□□□□ -0.04
VAT1L-201ENST00000302536 ERVV-1B6SEH8 477 aa14.78□□□□□ -0.04
VAT1L-201ENST00000302536 TRIM66O15016 1216 aa14.78□□□□□ -0.04
VAT1L-201ENST00000302536 HSPA1LP34931 641 aa14.78□□□□□ -0.04
VAT1L-201ENST00000302536 BMS1Q14692 1282 aaKnown RBP14.78□□□□□ -0.04
VAT1L-201ENST00000302536 FSIP1Q8NA03 581 aa14.78□□□□□ -0.04
VAT1L-201ENST00000302536 NKX2-3Q8TAU0 364 aa14.78□□□□□ -0.04
VAT1L-201ENST00000302536 NLRP3Q96P20 1036 aa14.78□□□□□ -0.04
VAT1L-201ENST00000302536 ROBO1Q9Y6N7 1651 aa14.78□□□□□ -0.04
VAT1L-201ENST00000302536 TRIM37O94972 964 aa14.78□□□□□ -0.04
VAT1L-201ENST00000302536 NCOA7Q8NI08 942 aa14.78□□□□□ -0.04
VAT1L-201ENST00000302536 RASSF4Q9H2L5 321 aa14.78□□□□□ -0.04
VAT1L-201ENST00000302536 ORC3Q9UBD5 711 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms