RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 CLMNQ96JQ2 1002 aa13.91□□□□□ -0.18
CLCC1-201ENST00000302500 MYO1BO43795 1136 aa13.9□□□□□ -0.18
CLCC1-201ENST00000302500 SURF6O75683 361 aaKnown RBP13.9□□□□□ -0.18
CLCC1-201ENST00000302500 WDHD1O75717 1129 aaPredicted RBP13.9□□□□□ -0.18
CLCC1-201ENST00000302500 MS4A1P11836 297 aa13.9□□□□□ -0.18
CLCC1-201ENST00000302500 TM4SF4P48230 202 aa13.9□□□□□ -0.18
CLCC1-201ENST00000302500 LBX1P52954 281 aa13.9□□□□□ -0.18
CLCC1-201ENST00000302500 G3BP1Q13283 466 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLCC1-201ENST00000302500 SH3BP5LQ7L8J4 393 aa13.9□□□□□ -0.18
CLCC1-201ENST00000302500 RPAP2Q8IXW5 612 aaPredicted RBP13.9□□□□□ -0.18
CLCC1-201ENST00000302500 SPATA5Q8NB90 893 aa13.9□□□□□ -0.18
CLCC1-201ENST00000302500 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLCC1-201ENST00000302500 IDI2Q9BXS1 227 aa13.9□□□□□ -0.18
CLCC1-201ENST00000302500 VEZTQ9HBM0 779 aa13.9□□□□□ -0.18
CLCC1-201ENST00000302500 GNL3LQ9NVN8 582 aaKnown RBP13.9□□□□□ -0.18
CLCC1-201ENST00000302500 COL2A1P02458 1487 aaPredicted RBP13.9□□□□□ -0.18
CLCC1-201ENST00000302500 TCP10L2B9ZVM9 353 aa13.9□□□□□ -0.19
CLCC1-201ENST00000302500 FRAT2O75474 233 aaPredicted RBP13.9□□□□□ -0.19
CLCC1-201ENST00000302500 CYP2E1P05181 493 aaPredicted RBP13.9□□□□□ -0.19
CLCC1-201ENST00000302500 LDHBP07195 334 aaKnown RBP13.9□□□□□ -0.19
CLCC1-201ENST00000302500 RBM5P52756 815 aaKnown RBP eCLIP13.9□□□□□ -0.19
CLCC1-201ENST00000302500 MAP3K10Q02779 954 aa13.9□□□□□ -0.19
CLCC1-201ENST00000302500 MECOMQ03112 1051 aa13.9□□□□□ -0.19
CLCC1-201ENST00000302500 TNFAIP1Q13829 316 aa13.9□□□□□ -0.19
CLCC1-201ENST00000302500 SPRYD7Q5W111 196 aa13.9□□□□□ -0.19
CLCC1-201ENST00000302500 ZFPM1Q8IX07 1006 aa13.9□□□□□ -0.19
CLCC1-201ENST00000302500 CFHR5Q9BXR6 569 aa13.9□□□□□ -0.19
CLCC1-201ENST00000302500 SAGE1Q9NXZ1 904 aa13.9□□□□□ -0.19
CLCC1-201ENST00000302500 EXOC6BQ9Y2D4 811 aa13.9□□□□□ -0.19
CLCC1-201ENST00000302500 MROH7-TTC4A0A0A0MT08 1334 aa13.89□□□□□ -0.19
CLCC1-201ENST00000302500 GPR75-ASB3A0A0A6YYF3 556 aa13.89□□□□□ -0.19
CLCC1-201ENST00000302500 GRM1Q13255 1194 aa13.89□□□□□ -0.19
CLCC1-201ENST00000302500 IFFO2Q5TF58 517 aa13.89□□□□□ -0.19
CLCC1-201ENST00000302500 TBC1D9Q6ZT07 1266 aa13.89□□□□□ -0.19
CLCC1-201ENST00000302500 PAXIP1Q6ZW49 1069 aaPredicted RBP13.89□□□□□ -0.19
CLCC1-201ENST00000302500 ADGRA1Q86SQ6 560 aa13.89□□□□□ -0.19
CLCC1-201ENST00000302500 DDX4Q9NQI0 724 aaKnown RBP13.89□□□□□ -0.19
CLCC1-201ENST00000302500 RNF186Q9NXI6 227 aa13.89□□□□□ -0.19
CLCC1-201ENST00000302500 ZNF112Q9UJU3 913 aa13.89□□□□□ -0.19
CLCC1-201ENST00000302500 ANGEL1Q9UNK9 670 aaKnown RBP13.89□□□□□ -0.19
CLCC1-201ENST00000302500 TESPA1A2RU30 521 aaPredicted RBP13.88□□□□□ -0.19
CLCC1-201ENST00000302500 CA12O43570 354 aa13.88□□□□□ -0.19
CLCC1-201ENST00000302500 SUPT20HL1Q3ZLR7 823 aa13.88□□□□□ -0.19
CLCC1-201ENST00000302500 ZGPATQ8N5A5 531 aaKnown RBP13.88□□□□□ -0.19
CLCC1-201ENST00000302500 RHPN1Q8TCX5 695 aa13.88□□□□□ -0.19
CLCC1-201ENST00000302500 FAM151AQ8WW52 585 aa13.88□□□□□ -0.19
CLCC1-201ENST00000302500 MS4A4AQ96JQ5 239 aa13.88□□□□□ -0.19
CLCC1-201ENST00000302500 NEUROD6Q96NK8 337 aa13.88□□□□□ -0.19
CLCC1-201ENST00000302500 TSKSQ9UJT2 592 aa13.88□□□□□ -0.19
CLCC1-201ENST00000302500 DOCK1Q14185 1865 aa13.87□□□□□ -0.19
CLCC1-201ENST00000302500 MYH7P12883 1935 aa13.87□□□□□ -0.19
CLCC1-201ENST00000302500 ZBTB48P10074 688 aaPredicted RBP13.87□□□□□ -0.19
CLCC1-201ENST00000302500 NF2P35240 595 aa13.87□□□□□ -0.19
CLCC1-201ENST00000302500 PRKG1Q13976 671 aa13.87□□□□□ -0.19
CLCC1-201ENST00000302500 ARMC9Q7Z3E5 817 aa13.87□□□□□ -0.19
CLCC1-201ENST00000302500 WNK4Q96J92 1243 aa13.87□□□□□ -0.19
CLCC1-201ENST00000302500 SNCAIPQ9Y6H5 919 aa13.87□□□□□ -0.19
CLCC1-201ENST00000302500 ATAD5Q96QE3 1844 aa13.86□□□□□ -0.19
CLCC1-201ENST00000302500 UQCRFS1P1P0C7P4 283 aa13.86□□□□□ -0.19
CLCC1-201ENST00000302500 VGLL4Q14135 290 aa13.86□□□□□ -0.19
CLCC1-201ENST00000302500 REM2Q8IYK8 340 aaPredicted RBP13.86□□□□□ -0.19
CLCC1-201ENST00000302500 PTPN18Q99952 460 aa13.86□□□□□ -0.19
CLCC1-201ENST00000302500 CCDC8Q9H0W5 538 aaPredicted RBP13.86□□□□□ -0.19
CLCC1-201ENST00000302500 PIH1D3Q9NQM4 214 aaKnown RBP13.86□□□□□ -0.19
CLCC1-201ENST00000302500 MKI67P46013 3256 aaKnown RBP13.85□□□□□ -0.19
CLCC1-201ENST00000302500 AK9Q5TCS8 1911 aa13.85□□□□□ -0.19
CLCC1-201ENST00000302500 PHF20L1A8MW92 1017 aa13.85□□□□□ -0.19
CLCC1-201ENST00000302500 IGF2BP3O00425 579 aaKnown RBP eCLIP13.85□□□□□ -0.19
CLCC1-201ENST00000302500 PPP1R12BO60237 982 aaPredicted RBP13.85□□□□□ -0.19
CLCC1-201ENST00000302500 IGSF3O75054 1194 aa13.85□□□□□ -0.19
CLCC1-201ENST00000302500 SLURP2P0DP57 97 aa13.85□□□□□ -0.19
CLCC1-201ENST00000302500 ZAP70P43403 619 aa13.85□□□□□ -0.19
CLCC1-201ENST00000302500 RRP1P56182 461 aaKnown RBP13.85□□□□□ -0.19
CLCC1-201ENST00000302500 NOM1Q5C9Z4 860 aaKnown RBP13.85□□□□□ -0.19
CLCC1-201ENST00000302500 ANKRD13AQ8IZ07 590 aa13.85□□□□□ -0.19
CLCC1-201ENST00000302500 R3HDMLQ9H3Y0 253 aa13.85□□□□□ -0.19
CLCC1-201ENST00000302500 ABCF2Q9UG63 623 aa13.85□□□□□ -0.19
CLCC1-201ENST00000302500 DDTLA6NHG4 134 aaPredicted RBP13.84□□□□□ -0.19
CLCC1-201ENST00000302500 ENTPD3O75355 529 aa13.84□□□□□ -0.19
CLCC1-201ENST00000302500 BTDP43251 543 aa13.84□□□□□ -0.19
CLCC1-201ENST00000302500 TNNI2P48788 182 aa13.84□□□□□ -0.19
CLCC1-201ENST00000302500 PPP4CP60510 307 aa13.84□□□□□ -0.19
CLCC1-201ENST00000302500 ERC1Q8IUD2 1116 aa13.84□□□□□ -0.19
CLCC1-201ENST00000302500 AIDAQ96BJ3 306 aa13.84□□□□□ -0.19
CLCC1-201ENST00000302500 ANTXR1Q9H6X2 564 aa13.84□□□□□ -0.19
CLCC1-201ENST00000302500 SNRKQ9NRH2 765 aa13.84□□□□□ -0.19
CLCC1-201ENST00000302500 USP40Q9NVE5 1235 aa13.84□□□□□ -0.19
CLCC1-201ENST00000302500 PCDHB15Q9Y5E8 787 aa13.84□□□□□ -0.19
CLCC1-201ENST00000302500 NDUFB9Q9Y6M9 179 aa13.84□□□□□ -0.19
CLCC1-201ENST00000302500 SPDYE5A6NIY4 337 aa13.83□□□□□ -0.2
CLCC1-201ENST00000302500 RGS3P49796 1198 aa13.83□□□□□ -0.2
CLCC1-201ENST00000302500 CAP1Q01518 475 aa13.83□□□□□ -0.2
CLCC1-201ENST00000302500 MOGSQ13724 837 aa13.83□□□□□ -0.2
CLCC1-201ENST00000302500 SPTY2D1Q68D10 685 aaPredicted RBP13.83□□□□□ -0.2
CLCC1-201ENST00000302500 ERICH6Q7L0X2 663 aa13.83□□□□□ -0.2
CLCC1-201ENST00000302500 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.83□□□□□ -0.2
CLCC1-201ENST00000302500 KIF1BPQ96EK5 621 aa13.83□□□□□ -0.2
CLCC1-201ENST00000302500 IL1RAPL2Q9NP60 686 aa13.83□□□□□ -0.2
CLCC1-201ENST00000302500 MYH1P12882 1939 aa13.82□□□□□ -0.2
CLCC1-201ENST00000302500 IREB2P48200 963 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms