RNA–Protein interactions for RNA: ENST00000298282.13

PKNOX2-201, Transcript of PBX/knotted 1 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX2, Length 3,687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-201ENST00000298282 ITPK1Q13572 414 aa12.41□□□□□ -0.42
PKNOX2-201ENST00000298282 CLEC4GQ6UXB4 293 aa12.41□□□□□ -0.42
PKNOX2-201ENST00000298282 SMARCC1Q92922 1105 aaPredicted RBP12.41□□□□□ -0.42
PKNOX2-201ENST00000298282 CNNM1Q9NRU3 951 aa12.41□□□□□ -0.42
PKNOX2-201ENST00000298282 RCOR1Q9UKL0 485 aa12.41□□□□□ -0.42
PKNOX2-201ENST00000298282 STK3Q13188 491 aa12.41□□□□□ -0.42
PKNOX2-201ENST00000298282 TTLL5Q6EMB2 1281 aa12.41□□□□□ -0.42
PKNOX2-201ENST00000298282 UTP14AQ9BVJ6 771 aaKnown RBP12.41□□□□□ -0.42
PKNOX2-201ENST00000298282 TAF1LQ8IZX4 1826 aa12.41□□□□□ -0.42
PKNOX2-201ENST00000298282 CARMIL3Q8ND23 1372 aa12.41□□□□□ -0.42
PKNOX2-201ENST00000298282 PLA2G4AP47712 749 aa12.4□□□□□ -0.42
PKNOX2-201ENST00000298282 ANTXR2P58335 489 aa12.4□□□□□ -0.42
PKNOX2-201ENST00000298282 CACTINQ8WUQ7 758 aaKnown RBP12.4□□□□□ -0.42
PKNOX2-201ENST00000298282 PIH1D3Q9NQM4 214 aaKnown RBP12.4□□□□□ -0.42
PKNOX2-201ENST00000298282 DDX19AQ9NUU7 478 aaKnown RBP12.4□□□□□ -0.42
PKNOX2-201ENST00000298282 CFAP45Q9UL16 551 aa12.4□□□□□ -0.42
PKNOX2-201ENST00000298282 TBC1D2BQ9UPU7 963 aa12.4□□□□□ -0.42
PKNOX2-201ENST00000298282 HPS5Q9UPZ3 1129 aa12.4□□□□□ -0.42
PKNOX2-201ENST00000298282 ZNF330Q9Y3S2 320 aaPredicted RBP12.4□□□□□ -0.42
PKNOX2-201ENST00000298282 DLEC1Q9Y238 1755 aa12.4□□□□□ -0.42
PKNOX2-201ENST00000298282 PTPDC1A2A3K4 754 aa12.4□□□□□ -0.42
PKNOX2-201ENST00000298282 DHX16O60231 1041 aaKnown RBP12.4□□□□□ -0.43
PKNOX2-201ENST00000298282 FDPSP14324 419 aaKnown RBP12.4□□□□□ -0.43
PKNOX2-201ENST00000298282 NCOA7Q8NI08 942 aa12.4□□□□□ -0.43
PKNOX2-201ENST00000298282 PGBD1Q96JS3 809 aa12.4□□□□□ -0.43
PKNOX2-201ENST00000298282 BTAF1O14981 1849 aa12.39□□□□□ -0.43
PKNOX2-201ENST00000298282 PI16Q6UXB8 463 aa12.39□□□□□ -0.43
PKNOX2-201ENST00000298282 ZNF397Q8NF99 534 aaPredicted RBP12.39□□□□□ -0.43
PKNOX2-201ENST00000298282 SPATA32Q96LK8 384 aa12.39□□□□□ -0.43
PKNOX2-201ENST00000298282 ZCCHC17Q9NP64 241 aaKnown RBP12.39□□□□□ -0.43
PKNOX2-201ENST00000298282 CCDC9Q9Y3X0 531 aaKnown RBP12.39□□□□□ -0.43
PKNOX2-201ENST00000298282 CACNA1SQ13698 1873 aa12.39□□□□□ -0.43
PKNOX2-201ENST00000298282 KAT6BQ8WYB5 2073 aa12.39□□□□□ -0.43
PKNOX2-201ENST00000298282 PHKA1P46020 1223 aa12.39□□□□□ -0.43
PKNOX2-201ENST00000298282 CCDC112Q8NEF3 446 aa12.39□□□□□ -0.43
PKNOX2-201ENST00000298282 LRRC2Q9BYS8 371 aa12.39□□□□□ -0.43
PKNOX2-201ENST00000298282 CLSTN2Q9H4D0 955 aa12.39□□□□□ -0.43
PKNOX2-201ENST00000298282 MAST2Q6P0Q8 1798 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 ZNF804BA4D1E1 1349 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 CNTNAP4Q9C0A0 1308 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 PDE6AP16499 860 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 ATP6V1AP38606 617 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 FERMT3Q86UX7 667 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 STRBPQ96SI9 672 aaKnown RBP12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 MTA3Q9BTC8 594 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 PNPLA7Q6ZV29 1317 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 SLC5A1P13866 664 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 LIG1P18858 919 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 MMP14P50281 582 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 WASHC4Q2M389 1173 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 CCDC85AQ96PX6 553 aaPredicted RBP12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 NOL10Q9BSC4 688 aaKnown RBP12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 ZNF213O14771 459 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 CCDC152Q4G0S7 254 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 FAM173BQ6P4H8 233 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 C10orf67Q8IYJ2 551 aa12.38□□□□□ -0.43
PKNOX2-201ENST00000298282 PRC1O43663 620 aa12.37□□□□□ -0.43
PKNOX2-201ENST00000298282 SLC9C2Q5TAH2 1124 aa12.37□□□□□ -0.43
PKNOX2-201ENST00000298282 SPATA5Q8NB90 893 aa12.37□□□□□ -0.43
PKNOX2-201ENST00000298282 SBF2Q86WG5 1849 aa12.37□□□□□ -0.43
PKNOX2-201ENST00000298282 MYH13Q9UKX3 1938 aa12.37□□□□□ -0.43
PKNOX2-201ENST00000298282 ZNF532Q9HCE3 1301 aa12.37□□□□□ -0.43
PKNOX2-201ENST00000298282 SF3B3Q15393 1217 aaKnown RBP12.37□□□□□ -0.43
PKNOX2-201ENST00000298282 SLC10A5Q5PT55 438 aa12.37□□□□□ -0.43
PKNOX2-201ENST00000298282 SMARCE1Q969G3 411 aa12.37□□□□□ -0.43
PKNOX2-201ENST00000298282 NUP62CLQ9H1M0 184 aa12.37□□□□□ -0.43
PKNOX2-201ENST00000298282 CCDC192P0DO97 292 aa12.36□□□□□ -0.43
PKNOX2-201ENST00000298282 MAP3K11Q16584 847 aa12.36□□□□□ -0.43
PKNOX2-201ENST00000298282 H3BQV1 296 aa12.36□□□□□ -0.43
PKNOX2-201ENST00000298282 IFFO2Q5TF58 517 aa12.36□□□□□ -0.43
PKNOX2-201ENST00000298282 SGMS1Q86VZ5 419 aa12.36□□□□□ -0.43
PKNOX2-201ENST00000298282 PATL2C9JE40 543 aaKnown RBP12.36□□□□□ -0.43
PKNOX2-201ENST00000298282 CAVIN2O95810 425 aa12.36□□□□□ -0.43
PKNOX2-201ENST00000298282 ERCC6LQ2NKX8 1250 aa12.36□□□□□ -0.43
PKNOX2-201ENST00000298282 TMEM87BQ96K49 555 aa12.36□□□□□ -0.43
PKNOX2-201ENST00000298282 POLR3GO15318 223 aaPredicted RBP12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 RASGRF1Q13972 1273 aa12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 CAMK4Q16566 473 aa12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 RC3H1Q5TC82 1133 aaKnown RBP12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 CEP135Q66GS9 1140 aa12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 RTEL1Q9NZ71 1219 aa12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 WWC3Q9ULE0 1092 aa12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 ZNF652Q9Y2D9 606 aa12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 MRVI1Q9Y6F6 885 aa12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 SH2B2O14492 632 aaPredicted RBP12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 VPS72Q15906 364 aa12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 TBC1D10CQ8IV04 446 aa12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 ZNF396Q96N95 335 aaPredicted RBP12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 CDC5LQ99459 802 aaKnown RBP12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 TOMM22Q9NS69 142 aa12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 PDS5AQ29RF7 1337 aaKnown RBP12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 LAMB1P07942 1786 aa12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 ENGASEQ8NFI3 743 aa12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 DDX11Q96FC9 970 aa12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 TFIP11Q9UBB9 837 aaKnown RBP12.35□□□□□ -0.43
PKNOX2-201ENST00000298282 GNAT2P19087 354 aa12.34□□□□□ -0.43
PKNOX2-201ENST00000298282 CLCN6P51797 869 aa12.34□□□□□ -0.43
PKNOX2-201ENST00000298282 TPD52L1Q16890 204 aaPredicted RBP12.34□□□□□ -0.43
PKNOX2-201ENST00000298282 KRBA2Q6ZNG9 492 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms