RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 PDE4DQ08499 809 aa17.41■□□□□ 0.38
FNDC1-201ENST00000297267 MGARPQ8TDB4 240 aa17.41■□□□□ 0.38
FNDC1-201ENST00000297267 PPANQ9NQ55 473 aaKnown RBP17.41■□□□□ 0.38
FNDC1-201ENST00000297267 CCDC169A6NNP5 214 aa17.41■□□□□ 0.38
FNDC1-201ENST00000297267 POTEB2H3BUK9 544 aa17.41■□□□□ 0.38
FNDC1-201ENST00000297267 TACC1O75410 805 aa17.41■□□□□ 0.38
FNDC1-201ENST00000297267 IL15P40933 162 aaPredicted RBP17.41■□□□□ 0.38
FNDC1-201ENST00000297267 KIF5AQ12840 1032 aa17.41■□□□□ 0.38
FNDC1-201ENST00000297267 MTX1Q13505 466 aa17.41■□□□□ 0.38
FNDC1-201ENST00000297267 PRAG1Q86YV5 1406 aa17.41■□□□□ 0.38
FNDC1-201ENST00000297267 KLHL7Q8IXQ5 586 aa17.41■□□□□ 0.38
FNDC1-201ENST00000297267 CKAP4Q07065 602 aaKnown RBP17.4■□□□□ 0.38
FNDC1-201ENST00000297267 DHX32Q7L7V1 743 aaKnown RBP17.4■□□□□ 0.38
FNDC1-201ENST00000297267 ADAT2Q7Z6V5 191 aaKnown RBP17.4■□□□□ 0.38
FNDC1-201ENST00000297267 CTAGE1Q96RT6 745 aa17.4■□□□□ 0.38
FNDC1-201ENST00000297267 SNX21Q969T3 373 aa17.4■□□□□ 0.38
FNDC1-201ENST00000297267 CNNM2Q9H8M5 875 aa17.4■□□□□ 0.38
FNDC1-201ENST00000297267 LDHBP07195 334 aaKnown RBP17.4■□□□□ 0.38
FNDC1-201ENST00000297267 TNNI3KQ59H18 835 aa17.4■□□□□ 0.38
FNDC1-201ENST00000297267 GIGYF2Q6Y7W6 1299 aaKnown RBP17.4■□□□□ 0.38
FNDC1-201ENST00000297267 FPGT-TNNI3KV9GXZ4 949 aa17.4■□□□□ 0.38
FNDC1-201ENST00000297267 GPATCH8Q9UKJ3 1502 aaKnown RBP17.4■□□□□ 0.38
FNDC1-201ENST00000297267 TRAF5O00463 557 aa17.39■□□□□ 0.38
FNDC1-201ENST00000297267 CSPG5O95196 566 aa17.39■□□□□ 0.38
FNDC1-201ENST00000297267 LDHCP07864 332 aa17.39■□□□□ 0.38
FNDC1-201ENST00000297267 DDB1Q16531 1140 aa17.39■□□□□ 0.38
FNDC1-201ENST00000297267 C6orf50Q9HD87 102 aa17.39■□□□□ 0.38
FNDC1-201ENST00000297267 IGSF22Q8N9C0 903 aa17.39■□□□□ 0.37
FNDC1-201ENST00000297267 VPS54Q9P1Q0 977 aa17.39■□□□□ 0.37
FNDC1-201ENST00000297267 ATXN8OSP0DMR3 200 aa17.39■□□□□ 0.37
FNDC1-201ENST00000297267 PARP1P09874 1014 aaKnown RBP17.39■□□□□ 0.37
FNDC1-201ENST00000297267 NAA25Q14CX7 972 aa17.39■□□□□ 0.37
FNDC1-201ENST00000297267 IQCGQ9H095 443 aaKnown RBP17.39■□□□□ 0.37
FNDC1-201ENST00000297267 ZBTB16Q05516 673 aa17.38■□□□□ 0.37
FNDC1-201ENST00000297267 BACH1O14867 736 aa17.38■□□□□ 0.37
FNDC1-201ENST00000297267 ZAP70P43403 619 aa17.38■□□□□ 0.37
FNDC1-201ENST00000297267 TSNARE1Q96NA8 513 aa17.38■□□□□ 0.37
FNDC1-201ENST00000297267 MYO1AQ9UBC5 1043 aa17.38■□□□□ 0.37
FNDC1-201ENST00000297267 TRIM35Q9UPQ4 493 aa17.38■□□□□ 0.37
FNDC1-201ENST00000297267 RALGAPBQ86X10 1494 aa17.38■□□□□ 0.37
FNDC1-201ENST00000297267 RIMS2Q9UQ26 1411 aa17.38■□□□□ 0.37
FNDC1-201ENST00000297267 HSPA4P34932 840 aa17.38■□□□□ 0.37
FNDC1-201ENST00000297267 SPECC1LQ69YQ0 1117 aa17.38■□□□□ 0.37
FNDC1-201ENST00000297267 ERMNQ8TAM6 284 aa17.38■□□□□ 0.37
FNDC1-201ENST00000297267 IL16Q14005 1332 aa17.38■□□□□ 0.37
FNDC1-201ENST00000297267 NPHP3Q7Z494 1330 aa17.38■□□□□ 0.37
FNDC1-201ENST00000297267 AKR1B15C9JRZ8 316 aaPredicted RBP17.38■□□□□ 0.37
FNDC1-201ENST00000297267 BIN2Q9UBW5 565 aaPredicted RBP17.38■□□□□ 0.37
FNDC1-201ENST00000297267 UFL1O94874 794 aa17.37■□□□□ 0.37
FNDC1-201ENST00000297267 VIMP08670 466 aaKnown RBP17.37■□□□□ 0.37
FNDC1-201ENST00000297267 KRT79Q5XKE5 535 aa17.37■□□□□ 0.37
FNDC1-201ENST00000297267 URB2Q14146 1524 aaKnown RBP17.37■□□□□ 0.37
FNDC1-201ENST00000297267 ACTN2P35609 894 aa17.37■□□□□ 0.37
FNDC1-201ENST00000297267 STXBP4Q6ZWJ1 553 aa17.37■□□□□ 0.37
FNDC1-201ENST00000297267 CCDC94Q9BW85 323 aaPredicted RBP17.37■□□□□ 0.37
FNDC1-201ENST00000297267 PTH1RQ03431 593 aa17.37■□□□□ 0.37
FNDC1-201ENST00000297267 SMC5Q8IY18 1101 aa17.37■□□□□ 0.37
FNDC1-201ENST00000297267 DESI2Q9BSY9 194 aa17.37■□□□□ 0.37
FNDC1-201ENST00000297267 BBXQ8WY36 941 aaPredicted RBP17.37■□□□□ 0.37
FNDC1-201ENST00000297267 CPLX4Q7Z7G2 160 aa17.37■□□□□ 0.37
FNDC1-201ENST00000297267 PARD3Q8TEW0 1356 aa17.37■□□□□ 0.37
FNDC1-201ENST00000297267 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
FNDC1-201ENST00000297267 SOS1Q07889 1333 aaPredicted RBP17.36■□□□□ 0.37
FNDC1-201ENST00000297267 TNRQ92752 1358 aa17.36■□□□□ 0.37
FNDC1-201ENST00000297267 IL2RBP14784 551 aa17.36■□□□□ 0.37
FNDC1-201ENST00000297267 CFAP58Q5T655 872 aa17.36■□□□□ 0.37
FNDC1-201ENST00000297267 CAPN12Q6ZSI9 719 aa17.36■□□□□ 0.37
FNDC1-201ENST00000297267 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.36■□□□□ 0.37
FNDC1-201ENST00000297267 ORAI2Q96SN7 254 aa17.36■□□□□ 0.37
FNDC1-201ENST00000297267 KCNQ4P56696 695 aa17.36■□□□□ 0.37
FNDC1-201ENST00000297267 MAPKAPK5Q8IW41 473 aa17.36■□□□□ 0.37
FNDC1-201ENST00000297267 TGFBRAP1Q8WUH2 860 aa17.36■□□□□ 0.37
FNDC1-201ENST00000297267 AGTPBP1Q9UPW5 1226 aa17.36■□□□□ 0.37
FNDC1-201ENST00000297267 GOLGA6L9A6NEM1 432 aa17.36■□□□□ 0.37
FNDC1-201ENST00000297267 GPAA1O43292 621 aa17.36■□□□□ 0.37
FNDC1-201ENST00000297267 CCDC121Q6ZUS5 278 aa17.36■□□□□ 0.37
FNDC1-201ENST00000297267 ZNF827Q17R98 1081 aa17.36■□□□□ 0.37
FNDC1-201ENST00000297267 FANCCQ00597 558 aa17.35■□□□□ 0.37
FNDC1-201ENST00000297267 RASAL2Q9UJF2 1139 aa17.35■□□□□ 0.37
FNDC1-201ENST00000297267 NR1I2O75469 434 aa17.35■□□□□ 0.37
FNDC1-201ENST00000297267 FERP16591 822 aa17.35■□□□□ 0.37
FNDC1-201ENST00000297267 SLF1Q9BQI6 1058 aa17.35■□□□□ 0.37
FNDC1-201ENST00000297267 UBAP1LF5GYI3 381 aa17.35■□□□□ 0.37
FNDC1-201ENST00000297267 GOLGA8HP0CJ92 632 aa17.35■□□□□ 0.37
FNDC1-201ENST00000297267 BIRC3Q13489 604 aa17.35■□□□□ 0.37
FNDC1-201ENST00000297267 LEO1Q8WVC0 666 aaPredicted RBP17.35■□□□□ 0.37
FNDC1-201ENST00000297267 TRAPPC8Q9Y2L5 1435 aa17.35■□□□□ 0.37
FNDC1-201ENST00000297267 MAP3K19Q56UN5 1328 aa17.35■□□□□ 0.37
FNDC1-201ENST00000297267 SYNRGQ9UMZ2 1314 aa17.35■□□□□ 0.37
FNDC1-201ENST00000297267 SDR42E1Q8WUS8 393 aa17.35■□□□□ 0.37
FNDC1-201ENST00000297267 CLIC6Q96NY7 704 aa17.35■□□□□ 0.37
FNDC1-201ENST00000297267 PALD1Q9ULE6 856 aa17.35■□□□□ 0.37
FNDC1-201ENST00000297267 ATP6V0A2Q9Y487 856 aa17.35■□□□□ 0.37
FNDC1-201ENST00000297267 TTC21AQ8NDW8 1320 aa17.34■□□□□ 0.37
FNDC1-201ENST00000297267 MAP3K9P80192 1104 aa17.34■□□□□ 0.37
FNDC1-201ENST00000297267 ME3Q16798 604 aa17.34■□□□□ 0.37
FNDC1-201ENST00000297267 TEX11Q8IYF3 940 aa17.34■□□□□ 0.37
FNDC1-201ENST00000297267 CPXCR1Q8N123 301 aa17.34■□□□□ 0.37
FNDC1-201ENST00000297267 RTL9Q8NET4 1388 aa17.34■□□□□ 0.37
FNDC1-201ENST00000297267 IFI16Q16666 785 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms