RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ZNF592Q92610 1267 aa10.85□□□□□ -0.67
PRDM9-201ENST00000296682 ZNF396Q96N95 335 aaPredicted RBP10.85□□□□□ -0.67
PRDM9-201ENST00000296682 ZNF219Q9P2Y4 722 aaPredicted RBP10.85□□□□□ -0.67
PRDM9-201ENST00000296682 TYRO3Q06418 890 aa10.85□□□□□ -0.67
PRDM9-201ENST00000296682 AGXT2Q9BYV1 514 aa10.85□□□□□ -0.67
PRDM9-201ENST00000296682 ZBTB43O43298 467 aa10.85□□□□□ -0.67
PRDM9-201ENST00000296682 UQCRFS1P1P0C7P4 283 aa10.85□□□□□ -0.67
PRDM9-201ENST00000296682 CLCN1P35523 988 aa10.85□□□□□ -0.67
PRDM9-201ENST00000296682 IARSP41252 1262 aaKnown RBP10.85□□□□□ -0.67
PRDM9-201ENST00000296682 CDC5LQ99459 802 aaKnown RBP10.85□□□□□ -0.67
PRDM9-201ENST00000296682 GNL3LQ9NVN8 582 aaKnown RBP10.85□□□□□ -0.67
PRDM9-201ENST00000296682 SMIM22K7EJ46 135 aa10.84□□□□□ -0.67
PRDM9-201ENST00000296682 LETM1O95202 739 aaPredicted RBP10.84□□□□□ -0.67
PRDM9-201ENST00000296682 CCNL1Q9UK58 526 aaPredicted RBP10.84□□□□□ -0.67
PRDM9-201ENST00000296682 RFC4P35249 363 aa10.84□□□□□ -0.67
PRDM9-201ENST00000296682 TBC1D10CQ8IV04 446 aa10.84□□□□□ -0.67
PRDM9-201ENST00000296682 NLRP3Q96P20 1036 aa10.84□□□□□ -0.67
PRDM9-201ENST00000296682 MYO5AQ9Y4I1 1855 aaKnown RBP10.84□□□□□ -0.67
PRDM9-201ENST00000296682 PFKFB2O60825 505 aa10.83□□□□□ -0.67
PRDM9-201ENST00000296682 CSF1RP07333 972 aa10.83□□□□□ -0.67
PRDM9-201ENST00000296682 ADD2P35612 726 aa10.83□□□□□ -0.67
PRDM9-201ENST00000296682 DYNLL1P63167 89 aaKnown RBP10.83□□□□□ -0.67
PRDM9-201ENST00000296682 SART3Q15020 963 aaKnown RBP10.83□□□□□ -0.67
PRDM9-201ENST00000296682 LCORLQ8N3X6 602 aa10.83□□□□□ -0.67
PRDM9-201ENST00000296682 KCNJ14Q9UNX9 436 aa10.83□□□□□ -0.67
PRDM9-201ENST00000296682 IFNL3Q8IZI9 196 aa10.83□□□□□ -0.68
PRDM9-201ENST00000296682 CELF1Q92879 486 aaKnown RBP10.83□□□□□ -0.68
PRDM9-201ENST00000296682 PGBD1Q96JS3 809 aa10.83□□□□□ -0.68
PRDM9-201ENST00000296682 EIF5P55010 431 aaKnown RBP10.83□□□□□ -0.68
PRDM9-201ENST00000296682 INTS5Q6P9B9 1019 aaKnown RBP10.83□□□□□ -0.68
PRDM9-201ENST00000296682 C3orf67Q6ZVT6 689 aa10.83□□□□□ -0.68
PRDM9-201ENST00000296682 CYB5R4Q7L1T6 521 aa10.83□□□□□ -0.68
PRDM9-201ENST00000296682 AATFQ9NY61 560 aaKnown RBP eCLIP10.83□□□□□ -0.68
PRDM9-201ENST00000296682 USP21Q9UK80 565 aa10.83□□□□□ -0.68
PRDM9-201ENST00000296682 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.83□□□□□ -0.68
PRDM9-201ENST00000296682 BCL9O00512 1426 aa10.83□□□□□ -0.68
PRDM9-201ENST00000296682 CTDNEP1O95476 244 aa10.82□□□□□ -0.68
PRDM9-201ENST00000296682 CLIC4Q9Y696 253 aa10.82□□□□□ -0.68
PRDM9-201ENST00000296682 ANGEL1Q9UNK9 670 aaKnown RBP10.82□□□□□ -0.68
PRDM9-201ENST00000296682 F8W031 263 aaPredicted RBP10.82□□□□□ -0.68
PRDM9-201ENST00000296682 SAFBQ15424 915 aaKnown RBP eCLIP10.82□□□□□ -0.68
PRDM9-201ENST00000296682 NAA16Q6N069 864 aaPredicted RBP10.82□□□□□ -0.68
PRDM9-201ENST00000296682 ZSCAN16Q9H4T2 348 aaPredicted RBP10.82□□□□□ -0.68
PRDM9-201ENST00000296682 ZSWIM5Q9P217 1185 aa10.82□□□□□ -0.68
PRDM9-201ENST00000296682 TULP1O00294 542 aaPredicted RBP10.81□□□□□ -0.68
PRDM9-201ENST00000296682 EVCP57679 992 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 WTAPQ15007 396 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 TBC1D9BQ66K14 1250 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 ZNF512BQ96KM6 892 aaPredicted RBP10.81□□□□□ -0.68
PRDM9-201ENST00000296682 RTCBQ9Y3I0 505 aaKnown RBP10.81□□□□□ -0.68
PRDM9-201ENST00000296682 LY75O60449 1722 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 MAGEB6P1A0A0J9YX57 407 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 G3V3G9 751 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 FAM47AQ5JRC9 791 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 DCAF8Q5TAQ9 597 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 NKX2-3Q8TAU0 364 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 BCL9LQ86UU0 1499 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 SMC2O95347 1197 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 PTPN21Q16825 1174 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 SLC51AQ86UW1 340 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 TRIM22Q8IYM9 498 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 CDHR2Q9BYE9 1310 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 MAST2Q6P0Q8 1798 aa10.81□□□□□ -0.68
PRDM9-201ENST00000296682 KLRK1P26718 216 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 RESTQ13127 1097 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 CCDC186Q7Z3E2 898 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 DZIP1Q86YF9 867 aaKnown RBP10.8□□□□□ -0.68
PRDM9-201ENST00000296682 ZNF34Q8IZ26 560 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 RASSF8Q8NHQ8 419 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 AK7Q96M32 723 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 STRBPQ96SI9 672 aaKnown RBP10.8□□□□□ -0.68
PRDM9-201ENST00000296682 SPATA31A1Q5TZJ5 1347 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 EXOSC10Q01780 885 aaKnown RBP10.8□□□□□ -0.68
PRDM9-201ENST00000296682 SSRP1Q08945 709 aaKnown RBP10.8□□□□□ -0.68
PRDM9-201ENST00000296682 TSC1Q92574 1164 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 SMARCC1Q92922 1105 aaPredicted RBP10.8□□□□□ -0.68
PRDM9-201ENST00000296682 FUCA2Q9BTY2 467 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 CBX8Q9HC52 389 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 ELP1O95163 1332 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 MROH5Q6ZUA9 1318 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 RIC1Q4ADV7 1423 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 CAMTA2O94983 1202 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 PTGS1P23219 599 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 RPS8P62241 208 aaKnown RBP10.8□□□□□ -0.68
PRDM9-201ENST00000296682 PARP10Q53GL7 1025 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 TPTE2Q6XPS3 522 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 LINC00116Q8NCU8 138 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 CLIC6Q96NY7 704 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 DDX19AQ9NUU7 478 aaKnown RBP10.8□□□□□ -0.68
PRDM9-201ENST00000296682 ZKSCAN5Q9Y2L8 839 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 NEDD4P46934 1319 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 THSD7AQ9UPZ6 1657 aa10.8□□□□□ -0.68
PRDM9-201ENST00000296682 GOLGA6L6A8MZA4 724 aa10.79□□□□□ -0.68
PRDM9-201ENST00000296682 ERVV-1B6SEH8 477 aa10.79□□□□□ -0.68
PRDM9-201ENST00000296682 USP17L12C9JPN9 530 aa10.79□□□□□ -0.68
PRDM9-201ENST00000296682 USP17L21D6R901 530 aa10.79□□□□□ -0.68
PRDM9-201ENST00000296682 C6orf229H3BNL8 230 aa10.79□□□□□ -0.68
PRDM9-201ENST00000296682 SPTLC2O15270 562 aa10.79□□□□□ -0.68
PRDM9-201ENST00000296682 USP5P45974 858 aa10.79□□□□□ -0.68
PRDM9-201ENST00000296682 ANTXR2P58335 489 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms