RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 SPECC1LQ69YQ0 1117 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 JMYQ8N9B5 988 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 KIFC2Q96AC6 838 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 DRC1Q96MC2 740 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 TECPR2O15040 1411 aa11.76□□□□□ -0.53
LMX1A-201ENST00000294816 A0A0U1RQJ8 604 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 A0A1B0GUL7 405 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 STX10O60499 249 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 LONRF3Q496Y0 759 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 KLHL10Q6JEL2 608 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 SHC4Q6S5L8 630 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 SRGAP1Q7Z6B7 1085 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 ATRIPQ8WXE1 791 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 PNKPQ96T60 521 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 ALG1Q9BT22 464 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 DSCC1Q9BVC3 393 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 LRRC37A3O60309 1634 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 NRXN3Q9Y4C0 1643 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 CDC27P30260 824 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 SLC39A14Q15043 492 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 TC2NQ8N9U0 490 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 MAST3O60307 1309 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 A0A087WZG4 1122 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 CUTAO60888 179 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 IFIT1P09914 478 aaKnown RBP11.75□□□□□ -0.53
LMX1A-201ENST00000294816 LTKP29376 864 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 PAXIP1Q6ZW49 1069 aaPredicted RBP11.75□□□□□ -0.53
LMX1A-201ENST00000294816 PPFIBP1Q86W92 1011 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 C19orf44Q9H6X5 657 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 COPRSQ9NQ92 184 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 HELLSQ9NRZ9 838 aa11.75□□□□□ -0.53
LMX1A-201ENST00000294816 NOP2P46087 812 aaKnown RBP11.74□□□□□ -0.53
LMX1A-201ENST00000294816 LMBR1LQ6UX01 489 aa11.74□□□□□ -0.53
LMX1A-201ENST00000294816 METTL16Q86W50 562 aaKnown RBP11.74□□□□□ -0.53
LMX1A-201ENST00000294816 VPS37DQ86XT2 251 aa11.74□□□□□ -0.53
LMX1A-201ENST00000294816 TUBE1Q9UJT0 475 aa11.74□□□□□ -0.53
LMX1A-201ENST00000294816 KCNH3Q9ULD8 1083 aa11.74□□□□□ -0.53
LMX1A-201ENST00000294816 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
LMX1A-201ENST00000294816 M0R2C6 588 aa11.74□□□□□ -0.53
LMX1A-201ENST00000294816 IMMTQ16891 758 aaKnown RBP11.74□□□□□ -0.53
LMX1A-201ENST00000294816 GRAMD1CQ8IYS0 662 aa11.74□□□□□ -0.53
LMX1A-201ENST00000294816 PHKBQ93100 1093 aa11.74□□□□□ -0.53
LMX1A-201ENST00000294816 PSD3Q9NYI0 1048 aa11.74□□□□□ -0.53
LMX1A-201ENST00000294816 EIF3CLB5ME19 914 aaKnown RBP11.73□□□□□ -0.53
LMX1A-201ENST00000294816 BEND6Q5SZJ8 279 aaPredicted RBP11.73□□□□□ -0.53
LMX1A-201ENST00000294816 ICE2Q659A1 982 aa11.73□□□□□ -0.53
LMX1A-201ENST00000294816 FOXP4Q8IVH2 680 aaPredicted RBP11.73□□□□□ -0.53
LMX1A-201ENST00000294816 CEP112Q8N8E3 955 aa11.73□□□□□ -0.53
LMX1A-201ENST00000294816 RGS22Q8NE09 1264 aa11.73□□□□□ -0.53
LMX1A-201ENST00000294816 EIF3CQ99613 913 aaKnown RBP11.73□□□□□ -0.53
LMX1A-201ENST00000294816 ANKZF1Q9H8Y5 726 aa11.73□□□□□ -0.53
LMX1A-201ENST00000294816 SAMSN1Q9NSI8 373 aaKnown RBP11.73□□□□□ -0.53
LMX1A-201ENST00000294816 RAI14Q9P0K7 980 aa11.73□□□□□ -0.53
LMX1A-201ENST00000294816 AGLP35573 1532 aa11.73□□□□□ -0.53
LMX1A-201ENST00000294816 N4BP2Q86UW6 1770 aaPredicted RBP11.73□□□□□ -0.53
LMX1A-201ENST00000294816 STX17P56962 302 aa11.73□□□□□ -0.53
LMX1A-201ENST00000294816 AKAP17AQ02040 695 aaKnown RBP11.73□□□□□ -0.53
LMX1A-201ENST00000294816 FMR1Q06787 632 aaKnown RBP eCLIP11.73□□□□□ -0.53
LMX1A-201ENST00000294816 TRIM29Q14134 588 aa11.73□□□□□ -0.53
LMX1A-201ENST00000294816 ZMYM1Q5SVZ6 1142 aa11.73□□□□□ -0.53
LMX1A-201ENST00000294816 AGXT2Q9BYV1 514 aa11.73□□□□□ -0.53
LMX1A-201ENST00000294816 HOOK1Q9UJC3 728 aaKnown RBP11.73□□□□□ -0.53
LMX1A-201ENST00000294816 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.73□□□□□ -0.53
LMX1A-201ENST00000294816 AKR1B15C9JRZ8 316 aaPredicted RBP11.73□□□□□ -0.53
LMX1A-201ENST00000294816 MAP2K7O14733 419 aa11.73□□□□□ -0.53
LMX1A-201ENST00000294816 RNF113AO15541 343 aaKnown RBP11.73□□□□□ -0.53
LMX1A-201ENST00000294816 GPATCH11Q8N954 259 aa11.73□□□□□ -0.53
LMX1A-201ENST00000294816 ATG3Q9NT62 314 aa11.73□□□□□ -0.53
LMX1A-201ENST00000294816 CDC23Q9UJX2 597 aa11.73□□□□□ -0.53
LMX1A-201ENST00000294816 NCAPD2Q15021 1401 aa11.73□□□□□ -0.53
LMX1A-201ENST00000294816 VSNL1P62760 191 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 FAM69CQ0P6D2 419 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 TRDNQ13061 729 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 KRT40Q6A162 431 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 CTR9Q6PD62 1173 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 ANKRD13DQ6ZTN6 518 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 PACS2Q86VP3 889 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 MICU3Q86XE3 530 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 IP6K1Q92551 441 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 GDAP1L1Q96MZ0 367 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 CDC5LQ99459 802 aaKnown RBP11.72□□□□□ -0.53
LMX1A-201ENST00000294816 JRKLQ9Y4A0 524 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 NALCNQ8IZF0 1738 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 UTYO14607 1347 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 RICTORQ6R327 1708 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 CTAGE9A4FU28 777 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 CASP8Q14790 479 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 NFXL1Q6ZNB6 911 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 SLC35F6Q8N357 371 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 METTL22Q9BUU2 404 aaPredicted RBP11.72□□□□□ -0.53
LMX1A-201ENST00000294816 PTPRUQ92729 1446 aa11.72□□□□□ -0.53
LMX1A-201ENST00000294816 CTAGE15A4D2H0 777 aa11.71□□□□□ -0.53
LMX1A-201ENST00000294816 POTEB2H3BUK9 544 aa11.71□□□□□ -0.53
LMX1A-201ENST00000294816 CTAGE8P0CG41 777 aa11.71□□□□□ -0.53
LMX1A-201ENST00000294816 TTC39AQ5SRH9 613 aa11.71□□□□□ -0.53
LMX1A-201ENST00000294816 CTAGE6Q86UF2 777 aa11.71□□□□□ -0.53
LMX1A-201ENST00000294816 CTAGE4Q8IX94 777 aa11.71□□□□□ -0.53
LMX1A-201ENST00000294816 OSBP2Q969R2 916 aa11.71□□□□□ -0.53
LMX1A-201ENST00000294816 RABEP2Q9H5N1 569 aa11.71□□□□□ -0.53
LMX1A-201ENST00000294816 FAM204AQ9H8W3 233 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms