RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 NFE2L3Q9Y4A8 694 aa16.89■□□□□ 0.29
CCNF-201ENST00000293968 PHLPP2Q6ZVD8 1323 aa16.89■□□□□ 0.29
CCNF-201ENST00000293968 UBE2Q2LH0YL09 131 aa16.89■□□□□ 0.29
CCNF-201ENST00000293968 ANTXR2P58335 489 aa16.89■□□□□ 0.29
CCNF-201ENST00000293968 SAFBQ15424 915 aaKnown RBP eCLIP16.89■□□□□ 0.29
CCNF-201ENST00000293968 VSTM4Q8IW00 320 aa16.89■□□□□ 0.29
CCNF-201ENST00000293968 GRAMD1CQ8IYS0 662 aa16.89■□□□□ 0.29
CCNF-201ENST00000293968 ARFGAP3Q9NP61 516 aa16.89■□□□□ 0.29
CCNF-201ENST00000293968 SLIT1O75093 1534 aa16.89■□□□□ 0.29
CCNF-201ENST00000293968 CCDC93Q567U6 631 aa16.89■□□□□ 0.29
CCNF-201ENST00000293968 SRRTQ9BXP5 876 aaKnown RBP16.89■□□□□ 0.29
CCNF-201ENST00000293968 CRYBG1Q9Y4K1 1723 aa16.88■□□□□ 0.29
CCNF-201ENST00000293968 RFX7Q2KHR2 1363 aa16.88■□□□□ 0.29
CCNF-201ENST00000293968 PALLDQ8WX93 1383 aa16.88■□□□□ 0.29
CCNF-201ENST00000293968 METTL24Q5JXM2 366 aa16.88■□□□□ 0.29
CCNF-201ENST00000293968 TOGARAM2Q6ZUX3 1019 aa16.88■□□□□ 0.29
CCNF-201ENST00000293968 INCENPQ9NQS7 918 aa16.88■□□□□ 0.29
CCNF-201ENST00000293968 ARHGAP6O43182 974 aa16.88■□□□□ 0.29
CCNF-201ENST00000293968 STX17P56962 302 aa16.88■□□□□ 0.29
CCNF-201ENST00000293968 TMEM67Q5HYA8 995 aa16.88■□□□□ 0.29
CCNF-201ENST00000293968 ZBTB43O43298 467 aa16.88■□□□□ 0.29
CCNF-201ENST00000293968 TUBB4AP04350 444 aa16.88■□□□□ 0.29
CCNF-201ENST00000293968 TPM1P09493 284 aa16.88■□□□□ 0.29
CCNF-201ENST00000293968 IRX5P78411 483 aaPredicted RBP16.88■□□□□ 0.29
CCNF-201ENST00000293968 MB21D2Q8IYB1 491 aaPredicted RBP16.88■□□□□ 0.29
CCNF-201ENST00000293968 FAM89AQ96GI7 184 aa16.88■□□□□ 0.29
CCNF-201ENST00000293968 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.88■□□□□ 0.292e-6■■■□□ 18.4
CCNF-201ENST00000293968 ANGEL1Q9UNK9 670 aaKnown RBP16.88■□□□□ 0.29
CCNF-201ENST00000293968 EFCAB8A8MWE9 144 aa16.87■□□□□ 0.29
CCNF-201ENST00000293968 TADA3O75528 432 aa16.87■□□□□ 0.29
CCNF-201ENST00000293968 LMAN1P49257 510 aa16.87■□□□□ 0.29
CCNF-201ENST00000293968 MCM6Q14566 821 aa16.87■□□□□ 0.29
CCNF-201ENST00000293968 APPBP2Q92624 585 aa16.87■□□□□ 0.29
CCNF-201ENST00000293968 DCAF5Q96JK2 942 aa16.87■□□□□ 0.29
CCNF-201ENST00000293968 PDE4BQ07343 736 aa16.87■□□□□ 0.29
CCNF-201ENST00000293968 CMTR1Q8N1G2 835 aaKnown RBP16.87■□□□□ 0.29
CCNF-201ENST00000293968 NUP133Q8WUM0 1156 aa16.87■□□□□ 0.29
CCNF-201ENST00000293968 SENP2Q9HC62 589 aa16.87■□□□□ 0.29
CCNF-201ENST00000293968 KCNJ14Q9UNX9 436 aa16.87■□□□□ 0.29
CCNF-201ENST00000293968 POLR2DO15514 142 aaKnown RBP16.87■□□□□ 0.29
CCNF-201ENST00000293968 SMC1AQ14683 1233 aaKnown RBP16.87■□□□□ 0.29
CCNF-201ENST00000293968 AKAP2Q9Y2D5 859 aa16.87■□□□□ 0.29
CCNF-201ENST00000293968 H7C1W4 665 aa16.86■□□□□ 0.29
CCNF-201ENST00000293968 TNNT3P45378 269 aaPredicted RBP16.86■□□□□ 0.29
CCNF-201ENST00000293968 TRIM65Q6PJ69 517 aa16.86■□□□□ 0.29
CCNF-201ENST00000293968 KRBA2Q6ZNG9 492 aa16.86■□□□□ 0.29
CCNF-201ENST00000293968 IRX2Q9BZI1 471 aaPredicted RBP16.86■□□□□ 0.29
CCNF-201ENST00000293968 CNNM1Q9NRU3 951 aa16.86■□□□□ 0.29
CCNF-201ENST00000293968 PARP3Q9Y6F1 533 aa16.86■□□□□ 0.29
CCNF-201ENST00000293968 IFIT3O14879 490 aaKnown RBP16.86■□□□□ 0.29
CCNF-201ENST00000293968 ZFYP08048 801 aaPredicted RBP16.86■□□□□ 0.29
CCNF-201ENST00000293968 ST5P78524 1137 aa16.86■□□□□ 0.29
CCNF-201ENST00000293968 METTL16Q86W50 562 aaKnown RBP16.86■□□□□ 0.29
CCNF-201ENST00000293968 REXO1L1PQ8IX06 675 aa16.86■□□□□ 0.29
CCNF-201ENST00000293968 SMARCE1Q969G3 411 aa16.86■□□□□ 0.29
CCNF-201ENST00000293968 ZKSCAN3Q9BRR0 538 aa16.86■□□□□ 0.29
CCNF-201ENST00000293968 NBPF26B4DH59 902 aa16.86■□□□□ 0.29
CCNF-201ENST00000293968 CYP27B1O15528 508 aa16.86■□□□□ 0.29
CCNF-201ENST00000293968 NBPF14Q5TI25 921 aa16.86■□□□□ 0.29
CCNF-201ENST00000293968 NBPF10Q6P3W6 841 aaKnown RBP16.86■□□□□ 0.29
CCNF-201ENST00000293968 PPFIBP1Q86W92 1011 aa16.86■□□□□ 0.29
CCNF-201ENST00000293968 NBPF15Q8N660 670 aa16.86■□□□□ 0.29
CCNF-201ENST00000293968 SLC12A7Q9Y666 1083 aa16.86■□□□□ 0.29
CCNF-201ENST00000293968 VWA3AA6NCI4 1184 aa16.85■□□□□ 0.29
CCNF-201ENST00000293968 AFMP43652 599 aa16.85■□□□□ 0.29
CCNF-201ENST00000293968 DHX58Q96C10 678 aa16.85■□□□□ 0.29
CCNF-201ENST00000293968 GPTP24298 496 aa16.85■□□□□ 0.29
CCNF-201ENST00000293968 CDC27P30260 824 aa16.85■□□□□ 0.29
CCNF-201ENST00000293968 CYP2C19P33261 490 aa16.85■□□□□ 0.29
CCNF-201ENST00000293968 SSRP1Q08945 709 aaKnown RBP16.85■□□□□ 0.29
CCNF-201ENST00000293968 IFIT5Q13325 482 aaKnown RBP16.85■□□□□ 0.29
CCNF-201ENST00000293968 CYB5R4Q7L1T6 521 aa16.85■□□□□ 0.29
CCNF-201ENST00000293968 KRI1Q8N9T8 703 aaKnown RBP16.85■□□□□ 0.29
CCNF-201ENST00000293968 MPHOSPH8Q99549 860 aa16.85■□□□□ 0.29
CCNF-201ENST00000293968 SERTAD1Q9UHV2 236 aa16.85■□□□□ 0.29
CCNF-201ENST00000293968 MTF1Q14872 753 aa16.85■□□□□ 0.29
CCNF-201ENST00000293968 PROSER2Q86WR7 435 aaPredicted RBP16.85■□□□□ 0.29
CCNF-201ENST00000293968 AIDAQ96BJ3 306 aa16.85■□□□□ 0.29
CCNF-201ENST00000293968 PARD6BQ9BYG5 372 aa16.85■□□□□ 0.29
CCNF-201ENST00000293968 KCND1Q9NSA2 647 aa16.85■□□□□ 0.29
CCNF-201ENST00000293968 BTBD18B2RXH4 712 aa16.84■□□□□ 0.29
CCNF-201ENST00000293968 CASP7P55210 303 aa16.84■□□□□ 0.29
CCNF-201ENST00000293968 SAMSN1Q9NSI8 373 aaKnown RBP16.84■□□□□ 0.29
CCNF-201ENST00000293968 SKIDA1Q1XH10 827 aa16.84■□□□□ 0.29
CCNF-201ENST00000293968 KIF4BQ2VIQ3 1234 aa16.84■□□□□ 0.29
CCNF-201ENST00000293968 TBC1D10CQ8IV04 446 aa16.84■□□□□ 0.29
CCNF-201ENST00000293968 SPECC1LQ69YQ0 1117 aa16.84■□□□□ 0.29
CCNF-201ENST00000293968 LDHAL6AQ6ZMR3 332 aa16.84■□□□□ 0.29
CCNF-201ENST00000293968 GOLGA1Q92805 767 aa16.84■□□□□ 0.29
CCNF-201ENST00000293968 MED1Q15648 1581 aaPredicted RBP16.83■□□□□ 0.29
CCNF-201ENST00000293968 PES1O00541 588 aaKnown RBP16.83■□□□□ 0.29
CCNF-201ENST00000293968 COBLO75128 1261 aa16.83■□□□□ 0.29
CCNF-201ENST00000293968 HSD3B7Q9H2F3 369 aa16.83■□□□□ 0.29
CCNF-201ENST00000293968 ZMYM6O95789 1325 aa16.83■□□□□ 0.29
CCNF-201ENST00000293968 FANCGO15287 622 aa16.83■□□□□ 0.28
CCNF-201ENST00000293968 PRR29P0C7W0 189 aa16.83■□□□□ 0.28
CCNF-201ENST00000293968 POSTNQ15063 836 aa16.83■□□□□ 0.28
CCNF-201ENST00000293968 CC2D1AQ6P1N0 951 aaPredicted RBP16.83■□□□□ 0.28
CCNF-201ENST00000293968 APOA5Q6Q788 366 aa16.83■□□□□ 0.28
CCNF-201ENST00000293968 FOXP4Q8IVH2 680 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms