RNA–Protein interactions for RNA: ENST00000293362.7

PSME3-201, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-201ENST00000293362 ZNF804BA4D1E1 1349 aa11.94□□□□□ -0.5
PSME3-201ENST00000293362 ONECUT3O60422 494 aaPredicted RBP11.94□□□□□ -0.5
PSME3-201ENST00000293362 FDPSP14324 419 aaKnown RBP11.94□□□□□ -0.5
PSME3-201ENST00000293362 HIBADHP31937 336 aaKnown RBP11.94□□□□□ -0.5
PSME3-201ENST00000293362 HPS5Q9UPZ3 1129 aa11.94□□□□□ -0.5
PSME3-201ENST00000293362 MBD3O95983 291 aa11.93□□□□□ -0.5
PSME3-201ENST00000293362 SERPINB2P05120 415 aa11.93□□□□□ -0.5
PSME3-201ENST00000293362 GRIK5Q16478 980 aa11.93□□□□□ -0.5
PSME3-201ENST00000293362 NAA16Q6N069 864 aaPredicted RBP11.93□□□□□ -0.5
PSME3-201ENST00000293362 MAGEB6P1A0A0J9YX57 407 aa11.93□□□□□ -0.5
PSME3-201ENST00000293362 KRT85P78386 507 aa11.93□□□□□ -0.5
PSME3-201ENST00000293362 TXNRD1Q16881 649 aa11.93□□□□□ -0.5
PSME3-201ENST00000293362 COL5A3P25940 1745 aaPredicted RBP11.93□□□□□ -0.5
PSME3-201ENST00000293362 IFIT3O14879 490 aaKnown RBP11.93□□□□□ -0.5
PSME3-201ENST00000293362 LIG1P18858 919 aa11.93□□□□□ -0.5
PSME3-201ENST00000293362 TMEM67Q5HYA8 995 aa11.93□□□□□ -0.5
PSME3-201ENST00000293362 SPATA32Q96LK8 384 aa11.93□□□□□ -0.5
PSME3-201ENST00000293362 CDC27P30260 824 aa11.92□□□□□ -0.5
PSME3-201ENST00000293362 MECOMQ03112 1051 aa11.92□□□□□ -0.5
PSME3-201ENST00000293362 MFSD6Q6ZSS7 791 aa11.92□□□□□ -0.5
PSME3-201ENST00000293362 RPGRQ92834 1020 aaKnown RBP11.92□□□□□ -0.5
PSME3-201ENST00000293362 AGXT2Q9BYV1 514 aa11.92□□□□□ -0.5
PSME3-201ENST00000293362 CARMIL3Q8ND23 1372 aa11.92□□□□□ -0.5
PSME3-201ENST00000293362 RTL9Q8NET4 1388 aa11.92□□□□□ -0.5
PSME3-201ENST00000293362 APBA3O96018 575 aa11.92□□□□□ -0.5
PSME3-201ENST00000293362 DIXDC1Q155Q3 683 aa11.92□□□□□ -0.5
PSME3-201ENST00000293362 SMARCC2Q8TAQ2 1214 aa11.92□□□□□ -0.5
PSME3-201ENST00000293362 ORC3Q9UBD5 711 aaPredicted RBP11.92□□□□□ -0.5
PSME3-201ENST00000293362 LAMA4Q16363 1823 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 GOLGA6L4A6NEF3 574 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 ZNF445P59923 1031 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 UBE2HP62256 183 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 DDR1Q08345 913 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 NUP133Q8WUM0 1156 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 ANGEL1Q9UNK9 670 aaKnown RBP11.91□□□□□ -0.5
PSME3-201ENST00000293362 FBXO33Q7Z6M2 555 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 CKAP2LQ8IYA6 745 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 ZNF274Q96GC6 653 aaPredicted RBP11.91□□□□□ -0.5
PSME3-201ENST00000293362 ZNF219Q9P2Y4 722 aaPredicted RBP11.91□□□□□ -0.5
PSME3-201ENST00000293362 ATRNO75882 1429 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 hCG_1642624A0A1W2PR95 340 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 RIMBP2O15034 1052 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 CYP2D6P10635 497 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 METAP2P50579 478 aaKnown RBP eCLIP11.91□□□□□ -0.5
PSME3-201ENST00000293362 RESTQ13127 1097 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 ZNF827Q17R98 1081 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 AKNAD1Q5T1N1 836 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 LRSAM1Q6UWE0 723 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 BBXQ8WY36 941 aaPredicted RBP11.91□□□□□ -0.5
PSME3-201ENST00000293362 NACAP1Q9BZK3 213 aa11.91□□□□□ -0.5
PSME3-201ENST00000293362 RANBP6O60518 1105 aaKnown RBP11.9□□□□□ -0.5
PSME3-201ENST00000293362 LEO1Q8WVC0 666 aaPredicted RBP11.9□□□□□ -0.5
PSME3-201ENST00000293362 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
PSME3-201ENST00000293362 MTMR7Q9Y216 660 aa11.9□□□□□ -0.5
PSME3-201ENST00000293362 USP17L12C9JPN9 530 aa11.9□□□□□ -0.5
PSME3-201ENST00000293362 USP17L21D6R901 530 aa11.9□□□□□ -0.5
PSME3-201ENST00000293362 SH2B2O14492 632 aaPredicted RBP11.9□□□□□ -0.5
PSME3-201ENST00000293362 GPSM2P81274 684 aa11.9□□□□□ -0.5
PSME3-201ENST00000293362 PPARAQ07869 468 aa11.9□□□□□ -0.5
PSME3-201ENST00000293362 APOA5Q6Q788 366 aa11.9□□□□□ -0.5
PSME3-201ENST00000293362 BICD2Q8TD16 824 aa11.9□□□□□ -0.5
PSME3-201ENST00000293362 IGDCC4Q8TDY8 1250 aa11.9□□□□□ -0.5
PSME3-201ENST00000293362 NSUN4Q96CB9 384 aaKnown RBP11.9□□□□□ -0.5
PSME3-201ENST00000293362 RIOK1Q9BRS2 568 aaKnown RBP11.9□□□□□ -0.5
PSME3-201ENST00000293362 UFL1O94874 794 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 GRAPQ13588 217 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 GRAPLQ8TC17 118 aaPredicted RBP11.89□□□□□ -0.51
PSME3-201ENST00000293362 PIBF1Q8WXW3 757 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 PGBD1Q96JS3 809 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 USP28Q96RU2 1077 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 THSD7AQ9UPZ6 1657 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 LRP5O75197 1615 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 A0A087WWV3 80 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 NMT2O60551 498 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 ERCC4Q92889 916 aaPredicted RBP11.89□□□□□ -0.51
PSME3-201ENST00000293362 C8orf76Q96K31 380 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 LY9Q9HBG7 655 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 RREB1Q92766 1687 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 C6orf229H3BNL8 230 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 FAM47AQ5JRC9 791 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 ILDR1Q86SU0 546 aaPredicted RBP11.89□□□□□ -0.51
PSME3-201ENST00000293362 DZIP1Q86YF9 867 aaKnown RBP11.89□□□□□ -0.51
PSME3-201ENST00000293362 ANKRD2Q9GZV1 360 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 DACT1Q9NYF0 836 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 SLC12A7Q9Y666 1083 aa11.89□□□□□ -0.51
PSME3-201ENST00000293362 CCDC69A6NI79 296 aa11.88□□□□□ -0.51
PSME3-201ENST00000293362 GOLGA8AA7E2F4 631 aa11.88□□□□□ -0.51
PSME3-201ENST00000293362 ZBTB43O43298 467 aa11.88□□□□□ -0.51
PSME3-201ENST00000293362 HMGN5P82970 282 aaKnown RBP11.88□□□□□ -0.51
PSME3-201ENST00000293362 TMEM87AQ8NBN3 555 aa11.88□□□□□ -0.51
PSME3-201ENST00000293362 BAZ2BQ9UIF8 2168 aaKnown RBP11.88□□□□□ -0.51
PSME3-201ENST00000293362 KIF28PB7ZC32 967 aa11.88□□□□□ -0.51
PSME3-201ENST00000293362 F8W031 263 aaPredicted RBP11.88□□□□□ -0.51
PSME3-201ENST00000293362 NR1I2O75469 434 aa11.88□□□□□ -0.51
PSME3-201ENST00000293362 GUCY1A2P33402 732 aa11.88□□□□□ -0.51
PSME3-201ENST00000293362 ST5P78524 1137 aa11.88□□□□□ -0.51
PSME3-201ENST00000293362 COL23A1Q86Y22 540 aaPredicted RBP11.88□□□□□ -0.51
PSME3-201ENST00000293362 SYAP1Q96A49 352 aaPredicted RBP11.88□□□□□ -0.51
PSME3-201ENST00000293362 LLPHQ9BRT6 129 aaKnown RBP11.88□□□□□ -0.51
PSME3-201ENST00000293362 SLC26A6Q9BXS9 759 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms