RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 ZBTB22O15209 634 aa11.83□□□□□ -0.52
HMHB1-201ENST00000289448 LDHBP07195 334 aaKnown RBP11.83□□□□□ -0.52
HMHB1-201ENST00000289448 TMOD2Q9NZR1 351 aa11.83□□□□□ -0.52
HMHB1-201ENST00000289448 DENND2AQ9ULE3 1009 aa11.83□□□□□ -0.52
HMHB1-201ENST00000289448 OTOFQ9HC10 1997 aa11.83□□□□□ -0.52
HMHB1-201ENST00000289448 ALDH1A1P00352 501 aa11.82□□□□□ -0.52
HMHB1-201ENST00000289448 MIGA2Q7L4E1 593 aa11.82□□□□□ -0.52
HMHB1-201ENST00000289448 ZFPM1Q8IX07 1006 aa11.82□□□□□ -0.52
HMHB1-201ENST00000289448 BRI3BPQ8WY22 251 aa11.82□□□□□ -0.52
HMHB1-201ENST00000289448 ZKSCAN4Q969J2 545 aaPredicted RBP11.82□□□□□ -0.52
HMHB1-201ENST00000289448 FAM198AQ9UFP1 575 aa11.82□□□□□ -0.52
HMHB1-201ENST00000289448 SNCAIPQ9Y6H5 919 aa11.82□□□□□ -0.52
HMHB1-201ENST00000289448 BRCA2P51587 3418 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 FKTNO75072 461 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 CAP1Q01518 475 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 TCP10Q12799 353 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 CRHR2Q13324 411 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 POLA2Q14181 598 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 PI16Q6UXB8 463 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 ZNF384Q8TF68 577 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 FAM151AQ8WW52 585 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 OTUD5Q96G74 571 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 NEUROD6Q96NK8 337 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 WRNIP1Q96S55 665 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 C1orf115Q9H7X2 142 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 USP40Q9NVE5 1235 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 HPS5Q9UPZ3 1129 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 AKAP2Q9Y2D5 859 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 CSADQ9Y600 493 aa11.81□□□□□ -0.52
HMHB1-201ENST00000289448 MKI67P46013 3256 aaKnown RBP11.81□□□□□ -0.52
HMHB1-201ENST00000289448 PDS5AQ29RF7 1337 aaKnown RBP11.81□□□□□ -0.52
HMHB1-201ENST00000289448 RPAP1Q9BWH6 1393 aaPredicted RBP11.8□□□□□ -0.52
HMHB1-201ENST00000289448 SPDYE5A6NIY4 337 aa11.8□□□□□ -0.52
HMHB1-201ENST00000289448 ZBTB7BO15156 539 aaPredicted RBP11.8□□□□□ -0.52
HMHB1-201ENST00000289448 INPP5BP32019 993 aa11.8□□□□□ -0.52
HMHB1-201ENST00000289448 ATP8B2P98198 1209 aa11.8□□□□□ -0.52
HMHB1-201ENST00000289448 MVPQ14764 893 aaKnown RBP11.8□□□□□ -0.52
HMHB1-201ENST00000289448 HMG20BQ9P0W2 317 aa11.8□□□□□ -0.52
HMHB1-201ENST00000289448 ABCF2Q9UG63 623 aa11.8□□□□□ -0.52
HMHB1-201ENST00000289448 GAKO14976 1311 aa11.8□□□□□ -0.52
HMHB1-201ENST00000289448 ZBED9Q6R2W3 1325 aa11.8□□□□□ -0.52
HMHB1-201ENST00000289448 MYH13Q9UKX3 1938 aa11.8□□□□□ -0.52
HMHB1-201ENST00000289448 LAMB1P07942 1786 aa11.79□□□□□ -0.52
HMHB1-201ENST00000289448 PDE4DIPQ5VU43 2346 aa11.79□□□□□ -0.52
HMHB1-201ENST00000289448 CCL15-CCL14A0A0B4J2E2 113 aa11.79□□□□□ -0.52
HMHB1-201ENST00000289448 GTF2A2P52657 109 aa11.79□□□□□ -0.52
HMHB1-201ENST00000289448 SOX10P56693 466 aa11.79□□□□□ -0.52
HMHB1-201ENST00000289448 G3BP1Q13283 466 aaKnown RBP eCLIP11.79□□□□□ -0.52
HMHB1-201ENST00000289448 PKN2Q16513 984 aaKnown RBP11.79□□□□□ -0.52
HMHB1-201ENST00000289448 CCL15Q16663 113 aa11.79□□□□□ -0.52
HMHB1-201ENST00000289448 TBC1D9Q6ZT07 1266 aa11.79□□□□□ -0.52
HMHB1-201ENST00000289448 SH3BP5LQ7L8J4 393 aa11.79□□□□□ -0.52
HMHB1-201ENST00000289448 FAM43AQ8N2R8 423 aa11.79□□□□□ -0.52
HMHB1-201ENST00000289448 SSH3Q8TE77 659 aa11.79□□□□□ -0.52
HMHB1-201ENST00000289448 FAM163AQ96GL9 167 aaPredicted RBP11.79□□□□□ -0.52
HMHB1-201ENST00000289448 ZNF341Q9BYN7 854 aa11.79□□□□□ -0.52
HMHB1-201ENST00000289448 ZNF112Q9UJU3 913 aa11.79□□□□□ -0.52
HMHB1-201ENST00000289448 RFX7Q2KHR2 1363 aa11.79□□□□□ -0.52
HMHB1-201ENST00000289448 IRF6O14896 467 aa11.78□□□□□ -0.52
HMHB1-201ENST00000289448 SLURP2P0DP57 97 aa11.78□□□□□ -0.52
HMHB1-201ENST00000289448 ARID4AP29374 1257 aaPredicted RBP11.78□□□□□ -0.52
HMHB1-201ENST00000289448 RGS3P49796 1198 aa11.78□□□□□ -0.52
HMHB1-201ENST00000289448 MLLT1Q03111 559 aaPredicted RBP11.78□□□□□ -0.52
HMHB1-201ENST00000289448 MECOMQ03112 1051 aa11.78□□□□□ -0.52
HMHB1-201ENST00000289448 DCAF15Q66K64 600 aa11.78□□□□□ -0.52
HMHB1-201ENST00000289448 OTUD7BQ6GQQ9 843 aa11.78□□□□□ -0.52
HMHB1-201ENST00000289448 ERO1BQ86YB8 467 aa11.78□□□□□ -0.52
HMHB1-201ENST00000289448 DZIP1Q86YF9 867 aaKnown RBP11.78□□□□□ -0.52
HMHB1-201ENST00000289448 ITPRIPQ8IWB1 547 aa11.78□□□□□ -0.52
HMHB1-201ENST00000289448 FTSJ3Q8IY81 847 aaKnown RBP11.78□□□□□ -0.52
HMHB1-201ENST00000289448 ZGPATQ8N5A5 531 aaKnown RBP11.78□□□□□ -0.52
HMHB1-201ENST00000289448 SPATA5Q8NB90 893 aa11.78□□□□□ -0.52
HMHB1-201ENST00000289448 HOOK2Q96ED9 719 aa11.78□□□□□ -0.52
HMHB1-201ENST00000289448 IDI2Q9BXS1 227 aa11.78□□□□□ -0.52
HMHB1-201ENST00000289448 DDX4Q9NQI0 724 aaKnown RBP11.78□□□□□ -0.52
HMHB1-201ENST00000289448 ATRNL1Q5VV63 1379 aa11.78□□□□□ -0.52
HMHB1-201ENST00000289448 PHF20L1A8MW92 1017 aa11.77□□□□□ -0.53
HMHB1-201ENST00000289448 BTBD19C9JJ37 291 aa11.77□□□□□ -0.53
HMHB1-201ENST00000289448 WDHD1O75717 1129 aaPredicted RBP11.77□□□□□ -0.53
HMHB1-201ENST00000289448 MCAMP43121 646 aa11.77□□□□□ -0.53
HMHB1-201ENST00000289448 BTDP43251 543 aa11.77□□□□□ -0.53
HMHB1-201ENST00000289448 RHBDL3P58872 404 aa11.77□□□□□ -0.53
HMHB1-201ENST00000289448 PPIL2Q13356 520 aa11.77□□□□□ -0.53
HMHB1-201ENST00000289448 GORABQ5T7V8 394 aa11.77□□□□□ -0.53
HMHB1-201ENST00000289448 FBXO46Q6PJ61 603 aaPredicted RBP11.77□□□□□ -0.53
HMHB1-201ENST00000289448 OTOP1Q7RTM1 612 aa11.77□□□□□ -0.53
HMHB1-201ENST00000289448 PANK1Q8TE04 598 aa11.77□□□□□ -0.53
HMHB1-201ENST00000289448 DBNDD2Q9BQY9 259 aa11.77□□□□□ -0.53
HMHB1-201ENST00000289448 MROH7-TTC4A0A0A0MT08 1334 aa11.77□□□□□ -0.53
HMHB1-201ENST00000289448 GPR75-ASB3A0A0A6YYF3 556 aa11.76□□□□□ -0.53
HMHB1-201ENST00000289448 DDTLA6NHG4 134 aaPredicted RBP11.76□□□□□ -0.53
HMHB1-201ENST00000289448 ENTPD3O75355 529 aa11.76□□□□□ -0.53
HMHB1-201ENST00000289448 SURF6O75683 361 aaKnown RBP11.76□□□□□ -0.53
HMHB1-201ENST00000289448 CETPP11597 493 aa11.76□□□□□ -0.53
HMHB1-201ENST00000289448 TAF1CQ15572 869 aaPredicted RBP11.76□□□□□ -0.53
HMHB1-201ENST00000289448 TNNI3KQ59H18 835 aa11.76□□□□□ -0.53
HMHB1-201ENST00000289448 SPTY2D1Q68D10 685 aaPredicted RBP11.76□□□□□ -0.53
HMHB1-201ENST00000289448 ERICH6Q7L0X2 663 aa11.76□□□□□ -0.53
HMHB1-201ENST00000289448 CD99L2Q8TCZ2 262 aa11.76□□□□□ -0.53
HMHB1-201ENST00000289448 NSUN4Q96CB9 384 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms