RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 RIC1Q4ADV7 1423 aa14.98□□□□□ -0.01
ZIC3-201ENST00000287538 IFIT3O14879 490 aaKnown RBP14.98□□□□□ -0.01
ZIC3-201ENST00000287538 MSL1Q68DK7 614 aa14.98□□□□□ -0.01
ZIC3-201ENST00000287538 FNBP4Q8N3X1 1017 aaPredicted RBP14.98□□□□□ -0.01
ZIC3-201ENST00000287538 CNBD1Q8NA66 436 aa14.98□□□□□ -0.01
ZIC3-201ENST00000287538 NKX2-3Q8TAU0 364 aa14.98□□□□□ -0.01
ZIC3-201ENST00000287538 SENP2Q9HC62 589 aa14.98□□□□□ -0.01
ZIC3-201ENST00000287538 TRPC5Q9UL62 973 aaPredicted RBP14.98□□□□□ -0.01
ZIC3-201ENST00000287538 BCL9LQ86UU0 1499 aa14.98□□□□□ -0.01
ZIC3-201ENST00000287538 HMGB1P09429 215 aaKnown RBP14.97□□□□□ -0.01
ZIC3-201ENST00000287538 ADD1P35611 737 aaKnown RBP14.97□□□□□ -0.01
ZIC3-201ENST00000287538 IRX5P78411 483 aaPredicted RBP14.97□□□□□ -0.01
ZIC3-201ENST00000287538 TBC1D10CQ8IV04 446 aa14.97□□□□□ -0.01
ZIC3-201ENST00000287538 CKAP2LQ8IYA6 745 aa14.97□□□□□ -0.01
ZIC3-201ENST00000287538 PTGS1P23219 599 aa14.97□□□□□ -0.01
ZIC3-201ENST00000287538 LTBP4Q8N2S1 1624 aa14.97□□□□□ -0.01
ZIC3-201ENST00000287538 PHKBQ93100 1093 aa14.97□□□□□ -0.01
ZIC3-201ENST00000287538 COL16A1Q07092 1604 aaPredicted RBP14.97□□□□□ -0.01
ZIC3-201ENST00000287538 PLEKHG2Q9H7P9 1386 aa14.97□□□□□ -0.01
ZIC3-201ENST00000287538 RANBP6O60518 1105 aaKnown RBP14.97□□□□□ -0.01
ZIC3-201ENST00000287538 TXNRD3Q86VQ6 643 aa14.97□□□□□ -0.01
ZIC3-201ENST00000287538 ABCC12Q96J65 1359 aa14.96□□□□□ -0.01
ZIC3-201ENST00000287538 PDIA4P13667 645 aaKnown RBP14.96□□□□□ -0.01
ZIC3-201ENST00000287538 PDIA3P30101 505 aaKnown RBP14.96□□□□□ -0.01
ZIC3-201ENST00000287538 TMEM67Q5HYA8 995 aa14.96□□□□□ -0.01
ZIC3-201ENST00000287538 RPGRQ92834 1020 aaKnown RBP14.96□□□□□ -0.01
ZIC3-201ENST00000287538 AIFM3Q96NN9 605 aa14.96□□□□□ -0.01
ZIC3-201ENST00000287538 AATFQ9NY61 560 aaKnown RBP eCLIP14.96□□□□□ -0.01
ZIC3-201ENST00000287538 ORC3Q9UBD5 711 aaPredicted RBP14.96□□□□□ -0.01
ZIC3-201ENST00000287538 DDX41Q9UJV9 622 aaKnown RBP14.96□□□□□ -0.01
ZIC3-201ENST00000287538 CCDC66A2RUB6 948 aa14.96□□□□□ -0.01
ZIC3-201ENST00000287538 NFIXQ14938 502 aa14.96□□□□□ -0.01
ZIC3-201ENST00000287538 IFNL3Q8IZI9 196 aa14.96□□□□□ -0.01
ZIC3-201ENST00000287538 KCNB2Q92953 911 aa14.96□□□□□ -0.01
ZIC3-201ENST00000287538 SF3A1Q15459 793 aaKnown RBP14.96□□□□□ -0.02
ZIC3-201ENST00000287538 NAA16Q6N069 864 aaPredicted RBP14.96□□□□□ -0.02
ZIC3-201ENST00000287538 NACAP1Q9BZK3 213 aa14.96□□□□□ -0.02
ZIC3-201ENST00000287538 GLI3P10071 1580 aa14.95□□□□□ -0.02
ZIC3-201ENST00000287538 hCG_1642624A0A1W2PR95 340 aa14.95□□□□□ -0.02
ZIC3-201ENST00000287538 ERICH4A6NGS2 130 aa14.95□□□□□ -0.02
ZIC3-201ENST00000287538 C6orf229H3BNL8 230 aa14.95□□□□□ -0.02
ZIC3-201ENST00000287538 RIMBP2O15034 1052 aa14.95□□□□□ -0.02
ZIC3-201ENST00000287538 CLEC4GQ6UXB4 293 aa14.95□□□□□ -0.02
ZIC3-201ENST00000287538 STRBPQ96SI9 672 aaKnown RBP14.95□□□□□ -0.02
ZIC3-201ENST00000287538 MYH14Q7Z406 1995 aaKnown RBP14.95□□□□□ -0.02
ZIC3-201ENST00000287538 DOT1LQ8TEK3 1739 aa14.95□□□□□ -0.02
ZIC3-201ENST00000287538 SHANK3Q9BYB0 1731 aa14.95□□□□□ -0.02
ZIC3-201ENST00000287538 CYB5R4Q7L1T6 521 aa14.95□□□□□ -0.02
ZIC3-201ENST00000287538 TTC6Q86TZ1 520 aa14.95□□□□□ -0.02
ZIC3-201ENST00000287538 NYXQ9GZU5 481 aa14.95□□□□□ -0.02
ZIC3-201ENST00000287538 F8W031 263 aaPredicted RBP14.94□□□□□ -0.02
ZIC3-201ENST00000287538 FOXP2O15409 715 aa14.94□□□□□ -0.02
ZIC3-201ENST00000287538 UBE2HP62256 183 aa14.94□□□□□ -0.02
ZIC3-201ENST00000287538 MFSD6Q6ZSS7 791 aa14.94□□□□□ -0.02
ZIC3-201ENST00000287538 FGFR2P21802 821 aa14.94□□□□□ -0.02
ZIC3-201ENST00000287538 DRC7Q8IY82 874 aa14.94□□□□□ -0.02
ZIC3-201ENST00000287538 SLIT2O94813 1529 aa14.94□□□□□ -0.02
ZIC3-201ENST00000287538 MAGEB6P1A0A0J9YX57 407 aa14.94□□□□□ -0.02
ZIC3-201ENST00000287538 SMTNL1A8MU46 457 aa14.94□□□□□ -0.02
ZIC3-201ENST00000287538 TNNT1P13805 278 aa14.94□□□□□ -0.02
ZIC3-201ENST00000287538 PRDX5P30044 214 aa14.94□□□□□ -0.02
ZIC3-201ENST00000287538 HIBADHP31937 336 aaKnown RBP14.94□□□□□ -0.02
ZIC3-201ENST00000287538 ADGRA1Q86SQ6 560 aa14.94□□□□□ -0.02
ZIC3-201ENST00000287538 UBE2Q2LH0YL09 131 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 TERF2Q15554 542 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 KRT27Q7Z3Y8 459 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 CCDC112Q8NEF3 446 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 FAM84BQ96KN1 310 aaPredicted RBP14.93□□□□□ -0.02
ZIC3-201ENST00000287538 N4BP2Q86UW6 1770 aaPredicted RBP14.93□□□□□ -0.02
ZIC3-201ENST00000287538 AHDC1Q5TGY3 1603 aaPredicted RBP14.93□□□□□ -0.02
ZIC3-201ENST00000287538 LAMB4A4D0S4 1761 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 CCDC69A6NI79 296 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 ME1P48163 572 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 SYNE3Q6ZMZ3 975 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 DZIP1Q86YF9 867 aaKnown RBP14.93□□□□□ -0.02
ZIC3-201ENST00000287538 NSUN7Q8NE18 718 aaKnown RBP14.93□□□□□ -0.02
ZIC3-201ENST00000287538 ERCC4Q92889 916 aaPredicted RBP14.93□□□□□ -0.02
ZIC3-201ENST00000287538 C8orf76Q96K31 380 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 SRCAPQ6ZRS2 3230 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 METAP2P50579 478 aaKnown RBP eCLIP14.93□□□□□ -0.02
ZIC3-201ENST00000287538 LRMPQ12912 555 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 UBE3CQ15386 1083 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 TMEM87AQ8NBN3 555 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 KIF18AQ8NI77 898 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.93□□□□□ -0.02
ZIC3-201ENST00000287538 ZNF592Q92610 1267 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 TIGD1Q96MW7 591 aa14.93□□□□□ -0.02
ZIC3-201ENST00000287538 NEDD4P46934 1319 aa14.92□□□□□ -0.02
ZIC3-201ENST00000287538 ERICH2A1L162 156 aa14.92□□□□□ -0.02
ZIC3-201ENST00000287538 APBA3O96018 575 aa14.92□□□□□ -0.02
ZIC3-201ENST00000287538 ARID4AP29374 1257 aaPredicted RBP14.92□□□□□ -0.02
ZIC3-201ENST00000287538 MORC2Q9Y6X9 1032 aaPredicted RBP14.92□□□□□ -0.02
ZIC3-201ENST00000287538 LIG1P18858 919 aa14.92□□□□□ -0.02
ZIC3-201ENST00000287538 EXOSC10Q01780 885 aaKnown RBP14.92□□□□□ -0.02
ZIC3-201ENST00000287538 EVX2Q03828 476 aa14.92□□□□□ -0.02
ZIC3-201ENST00000287538 TSGA10IPQ3SY00 556 aa14.92□□□□□ -0.02
ZIC3-201ENST00000287538 CCDC186Q7Z3E2 898 aa14.92□□□□□ -0.02
ZIC3-201ENST00000287538 KRT222Q8N1A0 295 aa14.92□□□□□ -0.02
ZIC3-201ENST00000287538 EPB41L4AQ9HCS5 686 aaPredicted RBP14.92□□□□□ -0.02
ZIC3-201ENST00000287538 BSDC1Q9NW68 430 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms