RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 RELTQ969Z4 430 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 E2F7Q96AV8 911 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 SLC26A8Q96RN1 970 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 LUC7LQ9NQ29 371 aaKnown RBP3.35□□□□□ -1.87
CHD1-201ENST00000284049 NDOR1Q9UHB4 597 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 CFAP43Q8NDM7 1665 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 XPOTO43592 962 aaKnown RBP3.35□□□□□ -1.87
CHD1-201ENST00000284049 LRRC41Q15345 812 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 GLIPR1L2Q4G1C9 344 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 MSS51Q4VC12 460 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 CCDC157Q569K6 752 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 SPATC1Q76KD6 591 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 KRT25Q7Z3Z0 450 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 LILRB2Q8N423 598 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 TMPRSS4Q9NRS4 437 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 MAP3K20Q9NYL2 800 aaKnown RBP3.35□□□□□ -1.87
CHD1-201ENST00000284049 USP25Q9UHP3 1055 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 EVLQ9UI08 416 aaPredicted RBP3.35□□□□□ -1.87
CHD1-201ENST00000284049 ZKSCAN5Q9Y2L8 839 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 HSP90AB1P08238 724 aaKnown RBP3.35□□□□□ -1.87
CHD1-201ENST00000284049 TRIM14Q14142 442 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 DDR2Q16832 855 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 LRRFIP1Q32MZ4 808 aaKnown RBP3.35□□□□□ -1.87
CHD1-201ENST00000284049 SV2CQ496J9 727 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 BRDTQ58F21 947 aaPredicted RBP3.35□□□□□ -1.87
CHD1-201ENST00000284049 RSRC2Q7L4I2 434 aaKnown RBP3.35□□□□□ -1.87
CHD1-201ENST00000284049 STK11IPQ8N1F8 1099 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 TTC8Q8TAM2 541 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 GGNBP2Q9H3C7 697 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 OSBPL3Q9H4L5 887 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 HDAC9Q9UKV0 1011 aa3.35□□□□□ -1.87
CHD1-201ENST00000284049 PDE1CQ14123 709 aaPredicted RBP3.34□□□□□ -1.87
CHD1-201ENST00000284049 VPS72Q15906 364 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 ADAT2Q7Z6V5 191 aaKnown RBP3.34□□□□□ -1.87
CHD1-201ENST00000284049 CELF2-AS1Q8N7Q2 184 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 YIPF4Q9BSR8 244 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 SELENOOQ9BVL4 669 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 RUSC1Q9BVN2 902 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 CCDC113Q9H0I3 377 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 PRDM9Q9NQV7 894 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 ANKIB1Q9P2G1 1089 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 IP6K2Q9UHH9 426 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 VSTM5A8MXK1 200 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 EML1O00423 815 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 APLP1P51693 650 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 PTPN12Q05209 780 aaKnown RBP3.34□□□□□ -1.87
CHD1-201ENST00000284049 SQSTM1Q13501 440 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 ECM1Q16610 540 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 CFAP100Q494V2 611 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 TMEM67Q5HYA8 995 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 PRPF40BQ6NWY9 871 aaKnown RBP3.34□□□□□ -1.87
CHD1-201ENST00000284049 UBE2R2Q712K3 238 aaPredicted RBP3.34□□□□□ -1.87
CHD1-201ENST00000284049 SUV39H2Q9H5I1 410 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 SLC5A4Q9NY91 659 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 LZTS1Q9Y250 596 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 ZNF652Q9Y2D9 606 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 AKNAQ7Z591 1439 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 BRINP1O60477 761 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 LIG3P49916 1009 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 TRIM32Q13049 653 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 EFHC2Q5JST6 749 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 VHLLQ6RSH7 139 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 C14orf80Q86SX3 495 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 MYLK4Q86YV6 388 aaPredicted RBP3.34□□□□□ -1.87
CHD1-201ENST00000284049 FAM178BQ8IXR5 827 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 RPUSD2Q8IZ73 545 aaKnown RBP3.34□□□□□ -1.87
CHD1-201ENST00000284049 OR2W6PQ8NHA6 318 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 CXorf38Q8TB03 319 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 RUNDC1Q96C34 613 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 TRIM11Q96F44 468 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 NT5C1AQ9BXI3 368 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 KLHL3Q9UH77 587 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 TSR3Q9UJK0 312 aaKnown RBP3.34□□□□□ -1.87
CHD1-201ENST00000284049 NEURL4Q96JN8 1562 aa3.34□□□□□ -1.87
CHD1-201ENST00000284049 TNFRSF10BO14763 440 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 VIL1P09327 827 aaKnown RBP3.34□□□□□ -1.88
CHD1-201ENST00000284049 IRS1P35568 1242 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 SERINC3Q13530 473 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 NCAPHQ15003 741 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 TAF12Q16514 161 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 SH3PXD2AQ5TCZ1 1133 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 TTC17Q96AE7 1141 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 IGFLR1Q9H665 355 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 KHNYNO15037 678 aaKnown RBP3.34□□□□□ -1.88
CHD1-201ENST00000284049 KLF4O43474 513 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 XYLBO75191 536 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 TCEA3O75764 348 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 ZRANB2O95218 330 aaKnown RBP eCLIP3.34□□□□□ -1.88
CHD1-201ENST00000284049 MAN1A1P33908 653 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 LRRTM3Q86VH5 581 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 PPM1KQ8N3J5 372 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 APBA2Q99767 749 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 KANSL3Q9P2N6 904 aa3.34□□□□□ -1.88
CHD1-201ENST00000284049 PLCG1P19174 1290 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 SH3BP5LQ7L8J4 393 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 TRIM22Q8IYM9 498 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 RHBDD1Q8TEB9 315 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 PMEPA1Q969W9 287 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 EAF1Q96JC9 268 aaPredicted RBP3.33□□□□□ -1.88
CHD1-201ENST00000284049 TMEM260Q9NX78 707 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms