RNA–Protein interactions for RNA: ENST00000284041.7

SREK1-201, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 3,751 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-201ENST00000284041 MYCLP1P12525 358 aaPredicted RBP5.05□□□□□ -1.6
SREK1-201ENST00000284041 PCBP1Q15365 356 aaKnown RBP eCLIP5.05□□□□□ -1.6
SREK1-201ENST00000284041 FAM43BQ6ZT52 329 aaPredicted RBP5.05□□□□□ -1.6
SREK1-201ENST00000284041 PPFIBP1Q86W92 1011 aa5.05□□□□□ -1.6
SREK1-201ENST00000284041 CBARPQ8N350 705 aaPredicted RBP5.05□□□□□ -1.6
SREK1-201ENST00000284041 SNRNP27Q8WVK2 155 aaKnown RBP5.05□□□□□ -1.6
SREK1-201ENST00000284041 C8orf48Q96LL4 319 aa5.05□□□□□ -1.6
SREK1-201ENST00000284041 RHOBTB2Q9BYZ6 727 aa5.05□□□□□ -1.6
SREK1-201ENST00000284041 NAGPAQ9UK23 515 aa5.05□□□□□ -1.6
SREK1-201ENST00000284041 ARSDP51689 593 aa5.05□□□□□ -1.6
SREK1-201ENST00000284041 VPS37DQ86XT2 251 aa5.05□□□□□ -1.6
SREK1-201ENST00000284041 SLC12A5Q9H2X9 1139 aa5.05□□□□□ -1.6
SREK1-201ENST00000284041 GPAMQ9HCL2 828 aa5.05□□□□□ -1.6
SREK1-201ENST00000284041 HOMER2Q9NSB8 354 aa5.05□□□□□ -1.6
SREK1-201ENST00000284041 FAM86C1Q9NVL1 165 aa5.05□□□□□ -1.6
SREK1-201ENST00000284041 SUSD2Q9UGT4 822 aa5.05□□□□□ -1.6
SREK1-201ENST00000284041 PCDHB14Q9Y5E9 798 aa5.05□□□□□ -1.6
SREK1-201ENST00000284041 TNKSO95271 1327 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 SNPHO15079 494 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 CASP7P55210 303 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 COL9A2Q14055 689 aaPredicted RBP5.04□□□□□ -1.6
SREK1-201ENST00000284041 SLC10A6Q3KNW5 377 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 NBPF10Q6P3W6 841 aaKnown RBP5.04□□□□□ -1.6
SREK1-201ENST00000284041 VN1R5Q7Z5H4 357 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 NBPF15Q8N660 670 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 FRMD6Q96NE9 622 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 SRCIN1Q9C0H9 1055 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 ACTR10Q9NZ32 417 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 FZD9O00144 591 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 EFSO43281 561 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 PTMAP06454 111 aaKnown RBP5.04□□□□□ -1.6
SREK1-201ENST00000284041 BMP1P13497 986 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 TUBB8Q3ZCM7 444 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 C4orf46Q504U0 113 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 ABHD17CQ6PCB6 329 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 MEIOBQ8N635 442 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 ZNF622Q969S3 477 aaKnown RBP eCLIP5.04□□□□□ -1.66e-7■■□□□ 14.3
SREK1-201ENST00000284041 OSMRQ99650 979 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 ARPC5LQ9BPX5 153 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 CCDC189A1A4V9 331 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 J3QW42 95 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 SOGA3Q5TF21 947 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 CYB5RLQ6IPT4 315 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 HFE2Q6ZVN8 426 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 SMC5Q8IY18 1101 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 ARNT2Q9HBZ2 717 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 NCOA5Q9HCD5 579 aaKnown RBP5.04□□□□□ -1.6
SREK1-201ENST00000284041 APEX2Q9UBZ4 518 aa5.04□□□□□ -1.6
SREK1-201ENST00000284041 KIF4AO95239 1232 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 SERPINB3P29508 390 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 DEKP35659 375 aaKnown RBP5.03□□□□□ -1.6
SREK1-201ENST00000284041 AKAP4Q5JQC9 854 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 FBXW10Q5XX13 1052 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 TMEM214Q6NUQ4 689 aaKnown RBP5.03□□□□□ -1.6
SREK1-201ENST00000284041 COL23A1Q86Y22 540 aaPredicted RBP5.03□□□□□ -1.6
SREK1-201ENST00000284041 OR13H1Q8NG92 308 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 NKD1Q969G9 470 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 FAM163AQ96GL9 167 aaPredicted RBP5.03□□□□□ -1.6
SREK1-201ENST00000284041 BRD7Q9NPI1 651 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 PNMA2Q9UL42 364 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 NOB1Q9ULX3 412 aaKnown RBP5.03□□□□□ -1.6
SREK1-201ENST00000284041 GOLGA8CPA6NN73 597 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 AXDND1Q5T1B0 1012 aaPredicted RBP5.03□□□□□ -1.6
SREK1-201ENST00000284041 NCAPG2Q86XI2 1143 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 TTC8Q8TAM2 541 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 SCLYQ96I15 445 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 POP1Q99575 1024 aaKnown RBP5.03□□□□□ -1.6
SREK1-201ENST00000284041 NRSN2Q9GZP1 204 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 PRKAB1Q9Y478 270 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 DNAJC8O75937 253 aaPredicted RBP5.03□□□□□ -1.6
SREK1-201ENST00000284041 SMPD1P17405 629 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 SLC20A2Q08357 652 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 ZNF252P-AS1Q0IIN9 211 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 SNAP47Q5SQN1 464 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 LSM14AQ8ND56 463 aaKnown RBP5.03□□□□□ -1.6
SREK1-201ENST00000284041 NINJ1Q92982 152 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 SMAD5Q99717 465 aaKnown RBP5.03□□□□□ -1.6
SREK1-201ENST00000284041 CACNA2D2Q9NY47 1150 aa5.03□□□□□ -1.6
SREK1-201ENST00000284041 A0A1W2PNR3 127 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 WNT7AO00755 349 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 NBPF1Q3BBV0 1214 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 HOMER1Q86YM7 354 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 NIM1KQ8IY84 436 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 TMTC2Q8N394 836 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 THAP3Q8WTV1 239 aaPredicted RBP5.02□□□□□ -1.61
SREK1-201ENST00000284041 MPHOSPH6Q99547 160 aaKnown RBP5.02□□□□□ -1.61
SREK1-201ENST00000284041 GFRA2O00451 464 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 PSAPP07602 524 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 MCM4P33991 863 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 RNF144AP50876 292 aaPredicted RBP5.02□□□□□ -1.61
SREK1-201ENST00000284041 SSRP1Q08945 709 aaKnown RBP5.02□□□□□ -1.61
SREK1-201ENST00000284041 SETDB1Q15047 1291 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 CCDC184Q52MB2 194 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 PKN3Q6P5Z2 889 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 UBE3DQ7Z6J8 389 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 TPH2Q8IWU9 490 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 SLC9A7Q96T83 725 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 MAF1Q9H063 256 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 RASSF4Q9H2L5 321 aa5.02□□□□□ -1.61
SREK1-201ENST00000284041 TYW1Q9NV66 732 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms