RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 EZH2Q15910 746 aaKnown RBP13.14□□□□□ -0.31
SCLT1-201ENST00000281142 DEFB132Q7Z7B7 95 aa13.14□□□□□ -0.31
SCLT1-201ENST00000281142 KIAA1468Q9P260 1216 aa13.14□□□□□ -0.31
SCLT1-201ENST00000281142 FDPSP14324 419 aaKnown RBP13.14□□□□□ -0.31
SCLT1-201ENST00000281142 ST5P78524 1137 aa13.14□□□□□ -0.31
SCLT1-201ENST00000281142 CAMKK2Q96RR4 588 aa13.14□□□□□ -0.31
SCLT1-201ENST00000281142 CCDC87Q9NVE4 849 aa13.14□□□□□ -0.31
SCLT1-201ENST00000281142 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.14□□□□□ -0.31
SCLT1-201ENST00000281142 ORC3Q9UBD5 711 aaPredicted RBP13.14□□□□□ -0.31
SCLT1-201ENST00000281142 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
SCLT1-201ENST00000281142 ZRANB2O95218 330 aaKnown RBP eCLIP13.13□□□□□ -0.31
SCLT1-201ENST00000281142 TNNI3KQ59H18 835 aa13.13□□□□□ -0.31
SCLT1-201ENST00000281142 ZNF396Q96N95 335 aaPredicted RBP13.13□□□□□ -0.31
SCLT1-201ENST00000281142 CARD6Q9BX69 1037 aa13.13□□□□□ -0.31
SCLT1-201ENST00000281142 NAT10Q9H0A0 1025 aaKnown RBP13.13□□□□□ -0.31
SCLT1-201ENST00000281142 FPGT-TNNI3KV9GXZ4 949 aa13.13□□□□□ -0.31
SCLT1-201ENST00000281142 KIF2AO00139 706 aaPredicted RBP13.13□□□□□ -0.31
SCLT1-201ENST00000281142 URI1O94763 535 aaPredicted RBP13.13□□□□□ -0.31
SCLT1-201ENST00000281142 MCMDC2Q4G0Z9 681 aa13.13□□□□□ -0.31
SCLT1-201ENST00000281142 TRIM65Q6PJ69 517 aa13.13□□□□□ -0.31
SCLT1-201ENST00000281142 SMIM5Q71RC9 77 aa13.13□□□□□ -0.31
SCLT1-201ENST00000281142 DHX32Q7L7V1 743 aaKnown RBP13.13□□□□□ -0.31
SCLT1-201ENST00000281142 AMIGO3Q86WK7 504 aa13.13□□□□□ -0.31
SCLT1-201ENST00000281142 ZNF330Q9Y3S2 320 aaPredicted RBP13.13□□□□□ -0.31
SCLT1-201ENST00000281142 UBR3Q6ZT12 1888 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
SCLT1-201ENST00000281142 SASH3O75995 380 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 ATP5JP18859 108 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 SF3B2Q13435 895 aaKnown RBP13.12□□□□□ -0.31
SCLT1-201ENST00000281142 RIC3Q7Z5B4 369 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 CCDC150Q8NCX0 1101 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 IMPACTQ9P2X3 320 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 CNTNAP4Q9C0A0 1308 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 NUP188Q5SRE5 1749 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 ARFGEF2Q9Y6D5 1785 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 ETF1P62495 437 aaKnown RBP13.12□□□□□ -0.31
SCLT1-201ENST00000281142 RAD51AP2Q09MP3 1159 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 TTLL5Q6EMB2 1281 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 COPS6Q7L5N1 327 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 XAGE3Q8WTP9 111 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 UBXN4Q92575 508 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 LLPHQ9BRT6 129 aaKnown RBP13.12□□□□□ -0.31
SCLT1-201ENST00000281142 HSD3B7Q9H2F3 369 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 SALL1Q9NSC2 1324 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 CARMIL3Q8ND23 1372 aa13.12□□□□□ -0.31
SCLT1-201ENST00000281142 TMEM232C9JQI7 657 aa13.11□□□□□ -0.31
SCLT1-201ENST00000281142 PDIA3P30101 505 aaKnown RBP13.11□□□□□ -0.31
SCLT1-201ENST00000281142 GYS2P54840 703 aa13.11□□□□□ -0.31
SCLT1-201ENST00000281142 FANCCQ00597 558 aa13.11□□□□□ -0.31
SCLT1-201ENST00000281142 STK38Q15208 465 aa13.11□□□□□ -0.31
SCLT1-201ENST00000281142 HSP90AA4PQ58FG1 418 aa13.11□□□□□ -0.31
SCLT1-201ENST00000281142 LINC00301Q8NCQ3 95 aa13.11□□□□□ -0.31
SCLT1-201ENST00000281142 MYD88Q99836 296 aa13.11□□□□□ -0.31
SCLT1-201ENST00000281142 UTYO14607 1347 aa13.11□□□□□ -0.31
SCLT1-201ENST00000281142 SF3A1Q15459 793 aaKnown RBP13.11□□□□□ -0.31
SCLT1-201ENST00000281142 CCDC34Q96HJ3 373 aa13.11□□□□□ -0.31
SCLT1-201ENST00000281142 UTP14AQ9BVJ6 771 aaKnown RBP13.11□□□□□ -0.31
SCLT1-201ENST00000281142 NEURL1BA8MQ27 555 aa13.11□□□□□ -0.31
SCLT1-201ENST00000281142 EXOSC10Q01780 885 aaKnown RBP13.11□□□□□ -0.31
SCLT1-201ENST00000281142 ZRSR1Q15695 479 aaKnown RBP13.11□□□□□ -0.31
SCLT1-201ENST00000281142 ADALQ6DHV7 355 aa13.11□□□□□ -0.31
SCLT1-201ENST00000281142 TMCO3Q6UWJ1 677 aa13.11□□□□□ -0.31
SCLT1-201ENST00000281142 TTLL7Q6ZT98 887 aa13.11□□□□□ -0.31
SCLT1-201ENST00000281142 SMARCE1Q969G3 411 aa13.11□□□□□ -0.31
SCLT1-201ENST00000281142 TSPYL1Q9H0U9 437 aa13.11□□□□□ -0.31
SCLT1-201ENST00000281142 TADA3O75528 432 aa13.1□□□□□ -0.31
SCLT1-201ENST00000281142 SLC3A2P08195 630 aaKnown RBP13.1□□□□□ -0.31
SCLT1-201ENST00000281142 IL6STP40189 918 aaPredicted RBP13.1□□□□□ -0.31
SCLT1-201ENST00000281142 BAG6P46379 1132 aa13.1□□□□□ -0.31
SCLT1-201ENST00000281142 PTPN12Q05209 780 aaKnown RBP13.1□□□□□ -0.31
SCLT1-201ENST00000281142 RC3H1Q5TC82 1133 aaKnown RBP13.1□□□□□ -0.31
SCLT1-201ENST00000281142 UPF1Q92900 1129 aaKnown RBP eCLIP13.1□□□□□ -0.31
SCLT1-201ENST00000281142 C4AP0C0L4 1744 aa13.1□□□□□ -0.31
SCLT1-201ENST00000281142 MROH7-TTC4A0A0A0MT08 1334 aa13.1□□□□□ -0.31
SCLT1-201ENST00000281142 E7EWF7 191 aa13.1□□□□□ -0.31
SCLT1-201ENST00000281142 GOLIM4O00461 696 aa13.1□□□□□ -0.31
SCLT1-201ENST00000281142 GNPATO15228 680 aa13.1□□□□□ -0.31
SCLT1-201ENST00000281142 EIF5P55010 431 aaKnown RBP13.1□□□□□ -0.31
SCLT1-201ENST00000281142 FAM193AP78312 1265 aa13.1□□□□□ -0.31
SCLT1-201ENST00000281142 MNS1Q8NEH6 495 aa13.1□□□□□ -0.31
SCLT1-201ENST00000281142 RTEL1Q9NZ71 1219 aa13.1□□□□□ -0.31
SCLT1-201ENST00000281142 KIF28PB7ZC32 967 aa13.09□□□□□ -0.31
SCLT1-201ENST00000281142 ZNF202O95125 648 aa13.09□□□□□ -0.31
SCLT1-201ENST00000281142 MARCKSP29966 332 aaPredicted RBP13.09□□□□□ -0.31
SCLT1-201ENST00000281142 RFX5P48382 616 aaPredicted RBP13.09□□□□□ -0.31
SCLT1-201ENST00000281142 GCKRQ14397 625 aa13.09□□□□□ -0.31
SCLT1-201ENST00000281142 CCDC125Q86Z20 511 aa13.09□□□□□ -0.31
SCLT1-201ENST00000281142 CREBRFQ8IUR6 639 aa13.09□□□□□ -0.31
SCLT1-201ENST00000281142 REXO1L1PQ8IX06 675 aa13.09□□□□□ -0.31
SCLT1-201ENST00000281142 PARP3Q9Y6F1 533 aa13.09□□□□□ -0.31
SCLT1-201ENST00000281142 EVCP57679 992 aa13.09□□□□□ -0.31
SCLT1-201ENST00000281142 NLRP12P59046 1061 aa13.09□□□□□ -0.31
SCLT1-201ENST00000281142 ZNF827Q17R98 1081 aa13.09□□□□□ -0.31
SCLT1-201ENST00000281142 RGS22Q8NE09 1264 aa13.09□□□□□ -0.31
SCLT1-201ENST00000281142 ZFP91Q96JP5 570 aaPredicted RBP13.09□□□□□ -0.31
SCLT1-201ENST00000281142 WDHD1O75717 1129 aaPredicted RBP13.08□□□□□ -0.32
SCLT1-201ENST00000281142 TBC1D8O95759 1140 aa13.08□□□□□ -0.32
SCLT1-201ENST00000281142 PFKFB1P16118 471 aa13.08□□□□□ -0.32
SCLT1-201ENST00000281142 OAS2P29728 719 aaKnown RBP13.08□□□□□ -0.32
SCLT1-201ENST00000281142 HAND2P61296 217 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms