RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 PCDHB15Q9Y5E8 787 aa11.09□□□□□ -0.63
PDCD4-201ENST00000280154 SBF1O95248 1867 aa11.09□□□□□ -0.63
PDCD4-201ENST00000280154 RAVER1Q8IY67 606 aaKnown RBP11.09□□□□□ -0.63
PDCD4-201ENST00000280154 MEIS3Q99687 375 aa11.09□□□□□ -0.63
PDCD4-201ENST00000280154 BCL2L13Q9BXK5 485 aa11.09□□□□□ -0.63
PDCD4-201ENST00000280154 AS3MTQ9HBK9 375 aa11.09□□□□□ -0.63
PDCD4-201ENST00000280154 DDX60LQ5H9U9 1706 aaKnown RBP11.09□□□□□ -0.63
PDCD4-201ENST00000280154 SLX4Q8IY92 1834 aa11.08□□□□□ -0.63
PDCD4-201ENST00000280154 IGBP1P78318 339 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 CCDC92Q53HC0 331 aaPredicted RBP11.08□□□□□ -0.64
PDCD4-201ENST00000280154 ARHGAP27Q6ZUM4 889 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 TAX1BP1Q86VP1 789 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 DCTPP1Q9H773 170 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 MYL6BP14649 208 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 ZSCAN20P17040 1043 aaPredicted RBP11.08□□□□□ -0.64
PDCD4-201ENST00000280154 PTGER2P43116 358 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 NFIXQ14938 502 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 TSNAXIP1Q2TAA8 658 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 ZNF396Q96N95 335 aaPredicted RBP11.08□□□□□ -0.64
PDCD4-201ENST00000280154 CD248Q9HCU0 757 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 UBAP1Q9NZ09 502 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 INTUQ9ULD6 942 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 ECM29Q5VYK3 1845 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 NBPF7P0C2Y1 421 aaPredicted RBP11.08□□□□□ -0.64
PDCD4-201ENST00000280154 FAM117BQ6P1L5 589 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 EXOC6Q8TAG9 804 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 NLRP7Q8WX94 980 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 JDP2Q8WYK2 163 aa11.08□□□□□ -0.64
PDCD4-201ENST00000280154 AK9Q5TCS8 1911 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 SHTN1A0MZ66 631 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 CFAP69A5D8W1 941 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 USPL1Q5W0Q7 1092 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 C15orf52Q6ZUT6 534 aaKnown RBP11.07□□□□□ -0.64
PDCD4-201ENST00000280154 VGLL2Q8N8G2 317 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 ATRIPQ8WXE1 791 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 GPR108Q9NPR9 543 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 MKS1Q9NXB0 559 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 TCEAL9Q9UHQ7 104 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 DMGDHQ9UI17 866 aaKnown RBP11.07□□□□□ -0.64
PDCD4-201ENST00000280154 LAMB1P07942 1786 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 SUCLG2Q96I99 432 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 HIP1RO75146 1068 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 GNAI2P04899 355 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 TNPO1Q92973 898 aaKnown RBP11.07□□□□□ -0.64
PDCD4-201ENST00000280154 MYD88Q99836 296 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 IRF2BPLQ9H1B7 796 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 ANO2Q9NQ90 1003 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 STK32BQ9NY57 414 aa11.07□□□□□ -0.64
PDCD4-201ENST00000280154 ARIH1Q9Y4X5 557 aaPredicted RBP11.07□□□□□ -0.64
PDCD4-201ENST00000280154 CWF19L2Q2TBE0 894 aaKnown RBP11.06□□□□□ -0.64
PDCD4-201ENST00000280154 PPP1R42Q7Z4L9 355 aa11.06□□□□□ -0.64
PDCD4-201ENST00000280154 RIC3Q7Z5B4 369 aa11.06□□□□□ -0.64
PDCD4-201ENST00000280154 PPP4R2Q9NY27 417 aa11.06□□□□□ -0.64
PDCD4-201ENST00000280154 EPHA10Q5JZY3 1008 aa11.06□□□□□ -0.64
PDCD4-201ENST00000280154 SYCP2LQ5T4T6 812 aa11.06□□□□□ -0.64
PDCD4-201ENST00000280154 NBPF3Q9H094 633 aa11.06□□□□□ -0.64
PDCD4-201ENST00000280154 PDE8AO60658 829 aa11.05□□□□□ -0.64
PDCD4-201ENST00000280154 LIG1P18858 919 aa11.05□□□□□ -0.64
PDCD4-201ENST00000280154 TTC19Q6DKK2 380 aaPredicted RBP11.05□□□□□ -0.64
PDCD4-201ENST00000280154 TTLL11Q8NHH1 800 aa11.05□□□□□ -0.64
PDCD4-201ENST00000280154 VMP1Q96GC9 406 aa11.05□□□□□ -0.64
PDCD4-201ENST00000280154 DDX27Q96GQ7 796 aaKnown RBP11.05□□□□□ -0.64
PDCD4-201ENST00000280154 NCAPGQ9BPX3 1015 aa11.05□□□□□ -0.64
PDCD4-201ENST00000280154 UTP14AQ9BVJ6 771 aaKnown RBP11.05□□□□□ -0.64
PDCD4-201ENST00000280154 TIAM2Q8IVF5 1701 aa11.05□□□□□ -0.64
PDCD4-201ENST00000280154 TMEM165Q9HC07 324 aa11.05□□□□□ -0.64
PDCD4-201ENST00000280154 COG6Q9Y2V7 657 aa11.05□□□□□ -0.64
PDCD4-201ENST00000280154 SH3TC1Q8TE82 1336 aa11.05□□□□□ -0.64
PDCD4-201ENST00000280154 CTSWP56202 376 aa11.05□□□□□ -0.64
PDCD4-201ENST00000280154 DEFB132Q7Z7B7 95 aa11.05□□□□□ -0.64
PDCD4-201ENST00000280154 OGFOD1Q8N543 542 aa11.05□□□□□ -0.64
PDCD4-201ENST00000280154 UBA5Q9GZZ9 404 aa11.05□□□□□ -0.64
PDCD4-201ENST00000280154 SRP68Q9UHB9 627 aaKnown RBP11.05□□□□□ -0.64
PDCD4-201ENST00000280154 CCP110O43303 1012 aa11.04□□□□□ -0.64
PDCD4-201ENST00000280154 PRR5LQ6MZQ0 368 aa11.04□□□□□ -0.64
PDCD4-201ENST00000280154 GCC1Q96CN9 775 aa11.04□□□□□ -0.64
PDCD4-201ENST00000280154 CDC5LQ99459 802 aaKnown RBP11.04□□□□□ -0.64
PDCD4-201ENST00000280154 MTFR1LQ9H019 292 aa11.04□□□□□ -0.64
PDCD4-201ENST00000280154 OSBPL3Q9H4L5 887 aa11.04□□□□□ -0.64
PDCD4-201ENST00000280154 TRMT1Q9NXH9 659 aaKnown RBP11.04□□□□□ -0.64
PDCD4-201ENST00000280154 AOX1Q06278 1338 aa11.04□□□□□ -0.64
PDCD4-201ENST00000280154 SETDB1Q15047 1291 aa11.04□□□□□ -0.64
PDCD4-201ENST00000280154 CRAMP1Q96RY5 1269 aa11.04□□□□□ -0.64
PDCD4-201ENST00000280154 SUFUQ9UMX1 484 aa11.04□□□□□ -0.64
PDCD4-201ENST00000280154 CHMP3Q9Y3E7 222 aa11.04□□□□□ -0.64
PDCD4-201ENST00000280154 LAMA4Q16363 1823 aa11.04□□□□□ -0.64
PDCD4-201ENST00000280154 CDK5RAP2Q96SN8 1893 aa11.04□□□□□ -0.64
PDCD4-201ENST00000280154 PIP4K2AP48426 406 aaPredicted RBP11.04□□□□□ -0.64
PDCD4-201ENST00000280154 KCNQ4P56696 695 aa11.04□□□□□ -0.64
PDCD4-201ENST00000280154 ZNF512BQ96KM6 892 aaPredicted RBP11.04□□□□□ -0.64
PDCD4-201ENST00000280154 BRIP1Q9BX63 1249 aa11.04□□□□□ -0.64
PDCD4-201ENST00000280154 DNAI2Q9GZS0 605 aa11.04□□□□□ -0.64
PDCD4-201ENST00000280154 PDS5AQ29RF7 1337 aaKnown RBP11.04□□□□□ -0.64
PDCD4-201ENST00000280154 SKILP12757 684 aa11.03□□□□□ -0.64
PDCD4-201ENST00000280154 PTPN12Q05209 780 aaKnown RBP11.03□□□□□ -0.64
PDCD4-201ENST00000280154 AKNAD1Q5T1N1 836 aa11.03□□□□□ -0.64
PDCD4-201ENST00000280154 STYK1Q6J9G0 422 aa11.03□□□□□ -0.64
PDCD4-201ENST00000280154 TMC4Q7Z404 712 aa11.03□□□□□ -0.64
PDCD4-201ENST00000280154 SNX32Q86XE0 403 aa11.03□□□□□ -0.64
PDCD4-201ENST00000280154 C7orf43Q8WVR3 580 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms