RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 SH2B2O14492 632 aaPredicted RBP11.26□□□□□ -0.61
TRIM55-201ENST00000276573 FDPSP14324 419 aaKnown RBP11.26□□□□□ -0.61
TRIM55-201ENST00000276573 MFSD6Q6ZSS7 791 aa11.26□□□□□ -0.61
TRIM55-201ENST00000276573 SYAP1Q96A49 352 aaPredicted RBP11.26□□□□□ -0.61
TRIM55-201ENST00000276573 RBM17Q96I25 401 aaKnown RBP11.26□□□□□ -0.61
TRIM55-201ENST00000276573 KRT23Q9C075 422 aa11.26□□□□□ -0.61
TRIM55-201ENST00000276573 ZSWIM5Q9P217 1185 aa11.26□□□□□ -0.61
TRIM55-201ENST00000276573 GOLGA8BA8MQT2 603 aa11.25□□□□□ -0.61
TRIM55-201ENST00000276573 POLRMTO00411 1230 aaKnown RBP11.25□□□□□ -0.61
TRIM55-201ENST00000276573 DYNLL1P63167 89 aaKnown RBP11.25□□□□□ -0.61
TRIM55-201ENST00000276573 MECOMQ03112 1051 aa11.25□□□□□ -0.61
TRIM55-201ENST00000276573 DDR1Q08345 913 aa11.25□□□□□ -0.61
TRIM55-201ENST00000276573 CHAF1AQ13111 956 aaPredicted RBP11.25□□□□□ -0.61
TRIM55-201ENST00000276573 C15orf52Q6ZUT6 534 aaKnown RBP11.25□□□□□ -0.61
TRIM55-201ENST00000276573 STAG1Q8WVM7 1258 aa11.25□□□□□ -0.61
TRIM55-201ENST00000276573 NSUN4Q96CB9 384 aaKnown RBP11.25□□□□□ -0.61
TRIM55-201ENST00000276573 TFIP11Q9UBB9 837 aaKnown RBP11.25□□□□□ -0.61
TRIM55-201ENST00000276573 XDHP47989 1333 aa11.25□□□□□ -0.61
TRIM55-201ENST00000276573 KLRG2A4D1S0 409 aaPredicted RBP11.25□□□□□ -0.61
TRIM55-201ENST00000276573 BBOX1O75936 387 aa11.25□□□□□ -0.61
TRIM55-201ENST00000276573 HOXA10P31260 410 aaPredicted RBP11.25□□□□□ -0.61
TRIM55-201ENST00000276573 TMED8Q6PL24 325 aaPredicted RBP11.25□□□□□ -0.61
TRIM55-201ENST00000276573 LRSAM1Q6UWE0 723 aa11.25□□□□□ -0.61
TRIM55-201ENST00000276573 TTC6Q86TZ1 520 aa11.25□□□□□ -0.61
TRIM55-201ENST00000276573 SDR42E1Q8WUS8 393 aa11.25□□□□□ -0.61
TRIM55-201ENST00000276573 SCAND2PQ9GZW5 306 aaPredicted RBP11.25□□□□□ -0.61
TRIM55-201ENST00000276573 ANAPC4Q9UJX5 808 aa11.25□□□□□ -0.61
TRIM55-201ENST00000276573 CACNA1SQ13698 1873 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 SYCE3A1L190 88 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 KDM4AO75164 1064 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 APBA3O96018 575 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 LIFRP42702 1097 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 GPSM2P81274 684 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 PPARAQ07869 468 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 TMEM67Q5HYA8 995 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 SPTY2D1Q68D10 685 aaPredicted RBP11.24□□□□□ -0.61
TRIM55-201ENST00000276573 GIMAP6Q6P9H5 292 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 SLC51AQ86UW1 340 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 SGMS1Q86VZ5 419 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 TDRD7Q8NHU6 1098 aaKnown RBP11.24□□□□□ -0.61
TRIM55-201ENST00000276573 BRIP1Q9BX63 1249 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 PANK2Q9BZ23 570 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 RNF41Q9H4P4 317 aaPredicted RBP11.24□□□□□ -0.61
TRIM55-201ENST00000276573 LY9Q9HBG7 655 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 SENP2Q9HC62 589 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 ELP1O95163 1332 aa11.24□□□□□ -0.61
TRIM55-201ENST00000276573 MINDY4BA8MYZ0 360 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 IFIT3O14879 490 aaKnown RBP11.23□□□□□ -0.61
TRIM55-201ENST00000276573 IGSF3O75054 1194 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 PPFIA3O75145 1194 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 APOA5Q6Q788 366 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 RAB11FIP4Q86YS3 637 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 CRAMP1Q96RY5 1269 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 MTA3Q9BTC8 594 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 ORC3Q9UBD5 711 aaPredicted RBP11.23□□□□□ -0.61
TRIM55-201ENST00000276573 CPLX1O14810 134 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 ATP2B4P23634 1241 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 PRDX5P30044 214 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 ADD1P35611 737 aaKnown RBP11.23□□□□□ -0.61
TRIM55-201ENST00000276573 FOSBP53539 338 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 ZNF827Q17R98 1081 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 RRP12Q5JTH9 1297 aaKnown RBP11.23□□□□□ -0.61
TRIM55-201ENST00000276573 NLGN1Q8N2Q7 840 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 WDR66Q8TBY9 1149 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 LEO1Q8WVC0 666 aaPredicted RBP11.23□□□□□ -0.61
TRIM55-201ENST00000276573 RBSNQ9H1K0 784 aa11.23□□□□□ -0.61
TRIM55-201ENST00000276573 ZBTB43O43298 467 aa11.22□□□□□ -0.61
TRIM55-201ENST00000276573 LETM1O95202 739 aaPredicted RBP11.22□□□□□ -0.61
TRIM55-201ENST00000276573 METAP2P50579 478 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRIM55-201ENST00000276573 TPRNQ4KMQ1 711 aa11.22□□□□□ -0.61
TRIM55-201ENST00000276573 CCDC183Q5T5S1 534 aa11.22□□□□□ -0.61
TRIM55-201ENST00000276573 NFXL1Q6ZNB6 911 aa11.22□□□□□ -0.61
TRIM55-201ENST00000276573 ZNF804AQ7Z570 1209 aa11.22□□□□□ -0.61
TRIM55-201ENST00000276573 COL23A1Q86Y22 540 aaPredicted RBP11.22□□□□□ -0.61
TRIM55-201ENST00000276573 SPATA32Q96LK8 384 aa11.22□□□□□ -0.61
TRIM55-201ENST00000276573 TOMM22Q9NS69 142 aa11.22□□□□□ -0.61
TRIM55-201ENST00000276573 CFAP45Q9UL16 551 aa11.22□□□□□ -0.61
TRIM55-201ENST00000276573 TIAM2Q8IVF5 1701 aa11.22□□□□□ -0.61
TRIM55-201ENST00000276573 RXRBP28702 533 aa11.21□□□□□ -0.61
TRIM55-201ENST00000276573 GUCY1B3Q02153 619 aa11.21□□□□□ -0.61
TRIM55-201ENST00000276573 CTR9Q6PD62 1173 aa11.21□□□□□ -0.61
TRIM55-201ENST00000276573 STK11IPQ8N1F8 1099 aa11.21□□□□□ -0.61
TRIM55-201ENST00000276573 TMTC2Q8N394 836 aa11.21□□□□□ -0.61
TRIM55-201ENST00000276573 RGS22Q8NE09 1264 aa11.21□□□□□ -0.61
TRIM55-201ENST00000276573 FAM217BQ9NTX9 383 aaPredicted RBP11.21□□□□□ -0.61
TRIM55-201ENST00000276573 PODXL2Q9NZ53 605 aa11.21□□□□□ -0.61
TRIM55-201ENST00000276573 CCDC69A6NI79 296 aa11.21□□□□□ -0.62
TRIM55-201ENST00000276573 UFL1O94874 794 aa11.21□□□□□ -0.62
TRIM55-201ENST00000276573 FGRP09769 529 aa11.21□□□□□ -0.62
TRIM55-201ENST00000276573 CDC27P30260 824 aa11.21□□□□□ -0.62
TRIM55-201ENST00000276573 SART3Q15020 963 aaKnown RBP11.21□□□□□ -0.62
TRIM55-201ENST00000276573 ATL3Q6DD88 541 aa11.21□□□□□ -0.62
TRIM55-201ENST00000276573 CPLX2Q6PUV4 134 aaKnown RBP11.21□□□□□ -0.62
TRIM55-201ENST00000276573 SYNE3Q6ZMZ3 975 aa11.21□□□□□ -0.62
TRIM55-201ENST00000276573 FLAD1Q8NFF5 587 aa11.21□□□□□ -0.62
TRIM55-201ENST00000276573 FBXO18Q8NFZ0 1043 aa11.21□□□□□ -0.62
TRIM55-201ENST00000276573 C8orf76Q96K31 380 aa11.21□□□□□ -0.62
TRIM55-201ENST00000276573 GPR101Q96P66 508 aaPredicted RBP11.21□□□□□ -0.62
TRIM55-201ENST00000276573 CRNKL1Q9BZJ0 848 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms