RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 HNRNPLLQ8WVV9 542 aaKnown RBP18.02■□□□□ 0.48
CTDSP1-201ENST00000273062 EIF3JO75822 258 aaKnown RBP18.02■□□□□ 0.47
CTDSP1-201ENST00000273062 LMOD1P29536 600 aaPredicted RBP18.02■□□□□ 0.47
CTDSP1-201ENST00000273062 JAKMIP3Q5VZ66 844 aa18.02■□□□□ 0.47
CTDSP1-201ENST00000273062 JMYQ8N9B5 988 aa18.02■□□□□ 0.47
CTDSP1-201ENST00000273062 N4BP2L2Q92802 583 aaPredicted RBP18.02■□□□□ 0.47
CTDSP1-201ENST00000273062 EPB41L2O43491 1005 aaKnown RBP18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 NRDCO43847 1150 aa18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 RHOXF2BP0C7M4 288 aa18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 HSP90B2PQ58FF3 399 aa18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 XAGE3Q8WTP9 111 aa18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 RIN2Q8WYP3 895 aaPredicted RBP18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 KAZALD1Q96I82 304 aa18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 SUCLG2Q96I99 432 aa18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 RHOXF2Q9BQY4 288 aa18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 KDM4FA0A1W2PPD8 638 aa18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 BIN1O00499 593 aa18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 IGKV5-2P06315 115 aa18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 RESTQ13127 1097 aa18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 TOGARAM2Q6ZUX3 1019 aa18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 PI4K2BQ8TCG2 481 aa18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 PRDM11Q9NQV5 511 aa18.01■□□□□ 0.47
CTDSP1-201ENST00000273062 LMTK3Q96Q04 1460 aa18■□□□□ 0.47
CTDSP1-201ENST00000273062 CCP110O43303 1012 aa18■□□□□ 0.47
CTDSP1-201ENST00000273062 WDHD1O75717 1129 aaPredicted RBP18■□□□□ 0.47
CTDSP1-201ENST00000273062 USP5P45974 858 aa18■□□□□ 0.47
CTDSP1-201ENST00000273062 FOSBP53539 338 aa18■□□□□ 0.47
CTDSP1-201ENST00000273062 KARSQ15046 597 aaKnown RBP18■□□□□ 0.47
CTDSP1-201ENST00000273062 TMEM139Q8IV31 216 aa18■□□□□ 0.47
CTDSP1-201ENST00000273062 MCM8Q9UJA3 840 aa18■□□□□ 0.47
CTDSP1-201ENST00000273062 RAB11FIP3O75154 756 aa18■□□□□ 0.47
CTDSP1-201ENST00000273062 PDCP20941 246 aa18■□□□□ 0.47
CTDSP1-201ENST00000273062 OS9Q13438 667 aaPredicted RBP18■□□□□ 0.47
CTDSP1-201ENST00000273062 COPS6Q7L5N1 327 aa18■□□□□ 0.47
CTDSP1-201ENST00000273062 RAB21Q9UL25 225 aa18■□□□□ 0.47
CTDSP1-201ENST00000273062 KINO60870 393 aaKnown RBP17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 RIC3Q7Z5B4 369 aa17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 DCAF5Q96JK2 942 aa17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 DESI2Q9BSY9 194 aa17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 SLAIN2Q9P270 581 aa17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 TAF6LQ9Y6J9 622 aa17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 STRCQ7RTU9 1775 aa17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 ALDH1L1O75891 902 aa17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 SYF2O95926 243 aaKnown RBP17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 NCAPHQ15003 741 aa17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 ENGASEQ8NFI3 743 aa17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 AFAP1L1Q8TED9 768 aa17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 TBC1D22AQ8WUA7 517 aa17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 CCDC12Q8WUD4 166 aaPredicted RBP17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 ZKSCAN4Q969J2 545 aaPredicted RBP17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.99■□□□□ 0.47
CTDSP1-201ENST00000273062 CPDO75976 1380 aa17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 A0A0U1RQJ8 604 aa17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 TMEM232C9JQI7 657 aa17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 GRM8O00222 908 aa17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 CTAGE5O15320 804 aa17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 CUTAO60888 179 aa17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 TOM1L2Q6ZVM7 507 aa17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 TTC5Q8N0Z6 440 aa17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 PRPF38AQ8NAV1 312 aaKnown RBP17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 LINS1Q8NG48 757 aa17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 CTCFLQ8NI51 663 aaPredicted RBP17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 ATRIPQ8WXE1 791 aa17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 PRPF6O94906 941 aaKnown RBP17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 FANCCQ00597 558 aa17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 KIRREL3Q8IZU9 778 aa17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 KLHDC4Q8TBB5 520 aa17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 BRF1Q92994 677 aa17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 CAPN7Q9Y6W3 813 aa17.98■□□□□ 0.47
CTDSP1-201ENST00000273062 FRMD3A2A2Y4 597 aa17.97■□□□□ 0.47
CTDSP1-201ENST00000273062 USP8P40818 1118 aa17.97■□□□□ 0.47
CTDSP1-201ENST00000273062 CABP4P57796 275 aa17.97■□□□□ 0.47
CTDSP1-201ENST00000273062 HSD3B7Q9H2F3 369 aa17.97■□□□□ 0.47
CTDSP1-201ENST00000273062 ADD1P35611 737 aaKnown RBP17.97■□□□□ 0.47
CTDSP1-201ENST00000273062 NEDD9Q14511 834 aa17.97■□□□□ 0.47
CTDSP1-201ENST00000273062 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
CTDSP1-201ENST00000273062 SRGAP1Q7Z6B7 1085 aa17.97■□□□□ 0.47
CTDSP1-201ENST00000273062 MYD88Q99836 296 aa17.97■□□□□ 0.47
CTDSP1-201ENST00000273062 NAT10Q9H0A0 1025 aaKnown RBP17.97■□□□□ 0.47
CTDSP1-201ENST00000273062 MTX1Q13505 466 aa17.96■□□□□ 0.47
CTDSP1-201ENST00000273062 CCDC73Q6ZRK6 1079 aa17.96■□□□□ 0.47
CTDSP1-201ENST00000273062 KAT14Q9H8E8 782 aa17.96■□□□□ 0.47
CTDSP1-201ENST00000273062 ZSCAN12O43309 604 aa17.96■□□□□ 0.47
CTDSP1-201ENST00000273062 DDX58O95786 925 aaKnown RBP17.96■□□□□ 0.47
CTDSP1-201ENST00000273062 HSP90B1P14625 803 aaKnown RBP17.96■□□□□ 0.47
CTDSP1-201ENST00000273062 INPP5BP32019 993 aa17.96■□□□□ 0.47
CTDSP1-201ENST00000273062 IGSF22Q8N9C0 903 aa17.96■□□□□ 0.47
CTDSP1-201ENST00000273062 FSIP1Q8NA03 581 aa17.96■□□□□ 0.47
CTDSP1-201ENST00000273062 MSANTD4Q8NCY6 345 aa17.96■□□□□ 0.47
CTDSP1-201ENST00000273062 BORCS6Q96GS4 357 aa17.96■□□□□ 0.47
CTDSP1-201ENST00000273062 STRN4Q9NRL3 753 aa17.96■□□□□ 0.47
CTDSP1-201ENST00000273062 TBC1D8BQ0IIM8 1120 aa17.95■□□□□ 0.46
CTDSP1-201ENST00000273062 EPHA10Q5JZY3 1008 aa17.95■□□□□ 0.46
CTDSP1-201ENST00000273062 SIL1Q9H173 461 aa17.95■□□□□ 0.46
CTDSP1-201ENST00000273062 PKD1L3Q7Z443 1732 aa17.95■□□□□ 0.46
CTDSP1-201ENST00000273062 NEURL1BA8MQ27 555 aa17.95■□□□□ 0.46
CTDSP1-201ENST00000273062 SNRPA1P09661 255 aaKnown RBP17.95■□□□□ 0.46
CTDSP1-201ENST00000273062 CCNHP51946 323 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms