RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 ZNF500O60304 480 aaPredicted RBP14.44□□□□□ -0.1
UBXN4-201ENST00000272638 SIK1P57059 783 aa14.44□□□□□ -0.1
UBXN4-201ENST00000272638 GOLGA8FQ08AF8 430 aa14.44□□□□□ -0.1
UBXN4-201ENST00000272638 GOLGA8DPQ0D2H9 430 aa14.44□□□□□ -0.1
UBXN4-201ENST00000272638 UIMC1Q96RL1 719 aa14.44□□□□□ -0.1
UBXN4-201ENST00000272638 KRT23Q9C075 422 aa14.44□□□□□ -0.1
UBXN4-201ENST00000272638 PDCL3Q9H2J4 239 aa14.44□□□□□ -0.1
UBXN4-201ENST00000272638 IKQ13123 557 aaPredicted RBP14.44□□□□□ -0.1
UBXN4-201ENST00000272638 RASGRF1Q13972 1273 aa14.44□□□□□ -0.1
UBXN4-201ENST00000272638 TBC1D10CQ8IV04 446 aa14.44□□□□□ -0.1
UBXN4-201ENST00000272638 GOLPH3LQ9H4A5 285 aa14.44□□□□□ -0.1
UBXN4-201ENST00000272638 POLR2DO15514 142 aaKnown RBP14.43□□□□□ -0.1
UBXN4-201ENST00000272638 SSBP05455 408 aaKnown RBP eCLIP14.43□□□□□ -0.1
UBXN4-201ENST00000272638 PFKFB1P16118 471 aa14.43□□□□□ -0.1
UBXN4-201ENST00000272638 TSR1Q2NL82 804 aaKnown RBP14.43□□□□□ -0.1
UBXN4-201ENST00000272638 DPCR1Q3MIW9 517 aa14.43□□□□□ -0.1
UBXN4-201ENST00000272638 NRXN3Q9Y4C0 1643 aa14.43□□□□□ -0.1
UBXN4-201ENST00000272638 UBE2Q2LH0YL09 131 aa14.43□□□□□ -0.1
UBXN4-201ENST00000272638 DYNC1I1O14576 645 aa14.43□□□□□ -0.1
UBXN4-201ENST00000272638 KCNQ2O43526 872 aa14.43□□□□□ -0.1
UBXN4-201ENST00000272638 SENP2Q9HC62 589 aa14.43□□□□□ -0.1
UBXN4-201ENST00000272638 DYNLL1P63167 89 aaKnown RBP14.43□□□□□ -0.1
UBXN4-201ENST00000272638 CHRNDQ07001 517 aa14.43□□□□□ -0.1
UBXN4-201ENST00000272638 LCORLQ8N3X6 602 aa14.43□□□□□ -0.1
UBXN4-201ENST00000272638 SMARCE1Q969G3 411 aa14.43□□□□□ -0.1
UBXN4-201ENST00000272638 ANKRD26Q9UPS8 1709 aa14.43□□□□□ -0.1
UBXN4-201ENST00000272638 ANKRD20A12PQ8NF67 263 aa14.42□□□□□ -0.1
UBXN4-201ENST00000272638 SAP30BPQ9UHR5 308 aaKnown RBP14.42□□□□□ -0.1
UBXN4-201ENST00000272638 ADD2P35612 726 aa14.42□□□□□ -0.1
UBXN4-201ENST00000272638 PDE4CQ08493 712 aa14.42□□□□□ -0.1
UBXN4-201ENST00000272638 APOA5Q6Q788 366 aa14.42□□□□□ -0.1
UBXN4-201ENST00000272638 PPFIBP1Q86W92 1011 aa14.42□□□□□ -0.1
UBXN4-201ENST00000272638 GPIHBP1Q8IV16 184 aa14.42□□□□□ -0.1
UBXN4-201ENST00000272638 RFC4P35249 363 aa14.42□□□□□ -0.1
UBXN4-201ENST00000272638 NR5A1Q13285 461 aa14.42□□□□□ -0.1
UBXN4-201ENST00000272638 CYB5R4Q7L1T6 521 aa14.42□□□□□ -0.1
UBXN4-201ENST00000272638 TMEM87AQ8NBN3 555 aa14.42□□□□□ -0.1
UBXN4-201ENST00000272638 KIF18AQ8NI77 898 aa14.42□□□□□ -0.1
UBXN4-201ENST00000272638 CACTINQ8WUQ7 758 aaKnown RBP14.42□□□□□ -0.1
UBXN4-201ENST00000272638 MAP7D2Q96T17 732 aa14.42□□□□□ -0.1
UBXN4-201ENST00000272638 ZSWIM5Q9P217 1185 aa14.42□□□□□ -0.1
UBXN4-201ENST00000272638 USP17L12C9JPN9 530 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 USP17L21D6R901 530 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 CLSTN1O94985 981 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 MCM7P33993 719 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 AKNAD1Q5T1N1 836 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 BRAPQ7Z569 592 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 XPO4Q9C0E2 1151 aaKnown RBP14.41□□□□□ -0.1
UBXN4-201ENST00000272638 ZHX3Q9H4I2 956 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 MED23Q9ULK4 1368 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 VWA3AA6NCI4 1184 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 CIAO1O76071 339 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 RBM5P52756 815 aaKnown RBP eCLIP14.41□□□□□ -0.1
UBXN4-201ENST00000272638 SNW1Q13573 536 aaKnown RBP14.41□□□□□ -0.1
UBXN4-201ENST00000272638 GRAMD1CQ8IYS0 662 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 ZNF444Q8N0Y2 327 aaPredicted RBP14.41□□□□□ -0.1
UBXN4-201ENST00000272638 ISCA1Q9BUE6 129 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 DNAI1Q9UI46 699 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 KCNH3Q9ULD8 1083 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 UBR1Q8IWV7 1749 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 CNNM2Q9H8M5 875 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 KNDC1Q76NI1 1749 aa14.41□□□□□ -0.1
UBXN4-201ENST00000272638 C3P01024 1663 aa14.4□□□□□ -0.1
UBXN4-201ENST00000272638 TNS3Q68CZ2 1445 aa14.4□□□□□ -0.1
UBXN4-201ENST00000272638 EEF2KMTQ96G04 330 aa14.4□□□□□ -0.1
UBXN4-201ENST00000272638 RGPD8O14715 1765 aaPredicted RBP14.4□□□□□ -0.1
UBXN4-201ENST00000272638 PATL2C9JE40 543 aaKnown RBP14.4□□□□□ -0.1
UBXN4-201ENST00000272638 TXLNAP40222 546 aa14.4□□□□□ -0.1
UBXN4-201ENST00000272638 GPR108Q9NPR9 543 aa14.4□□□□□ -0.1
UBXN4-201ENST00000272638 KIAA1468Q9P260 1216 aa14.4□□□□□ -0.1
UBXN4-201ENST00000272638 UBAP1LF5GYI3 381 aa14.4□□□□□ -0.1
UBXN4-201ENST00000272638 MPHOSPH10O00566 681 aaKnown RBP14.4□□□□□ -0.1
UBXN4-201ENST00000272638 CTDNEP1O95476 244 aa14.4□□□□□ -0.1
UBXN4-201ENST00000272638 FILIP1LQ4L180 1135 aa14.4□□□□□ -0.1
UBXN4-201ENST00000272638 SYT10Q6XYQ8 523 aa14.4□□□□□ -0.1
UBXN4-201ENST00000272638 ZSCAN29Q8IWY8 852 aaPredicted RBP14.4□□□□□ -0.1
UBXN4-201ENST00000272638 UTYO14607 1347 aa14.4□□□□□ -0.1
UBXN4-201ENST00000272638 LMTK3Q96Q04 1460 aa14.39□□□□□ -0.11
UBXN4-201ENST00000272638 PICALMQ13492 652 aa14.39□□□□□ -0.11
UBXN4-201ENST00000272638 ADALQ6DHV7 355 aa14.39□□□□□ -0.11
UBXN4-201ENST00000272638 RCOR1Q9UKL0 485 aa14.39□□□□□ -0.11
UBXN4-201ENST00000272638 PRIMPOLQ96LW4 560 aa14.39□□□□□ -0.11
UBXN4-201ENST00000272638 GPR101Q96P66 508 aaPredicted RBP14.39□□□□□ -0.11
UBXN4-201ENST00000272638 SRP68Q9UHB9 627 aaKnown RBP14.39□□□□□ -0.11
UBXN4-201ENST00000272638 TRIM75PA6NK02 468 aa14.39□□□□□ -0.11
UBXN4-201ENST00000272638 AP5Z1O43299 807 aa14.39□□□□□ -0.11
UBXN4-201ENST00000272638 CBFA2T2O43439 604 aa14.39□□□□□ -0.11
UBXN4-201ENST00000272638 KRI1Q8N9T8 703 aaKnown RBP14.39□□□□□ -0.11
UBXN4-201ENST00000272638 LINC00301Q8NCQ3 95 aa14.39□□□□□ -0.11
UBXN4-201ENST00000272638 TRIM34Q9BYJ4 488 aa14.39□□□□□ -0.11
UBXN4-201ENST00000272638 KAT14Q9H8E8 782 aa14.39□□□□□ -0.11
UBXN4-201ENST00000272638 PXDNLA1KZ92 1463 aa14.39□□□□□ -0.11
UBXN4-201ENST00000272638 CCDC194A0A1B0GVG4 234 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 CYP19A1P11511 503 aaPredicted RBP14.38□□□□□ -0.11
UBXN4-201ENST00000272638 ERCC3P19447 782 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 CDC27P30260 824 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 EIF6P56537 245 aaKnown RBP14.38□□□□□ -0.11
UBXN4-201ENST00000272638 HEATR3Q7Z4Q2 680 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 TMEM87BQ96K49 555 aa14.38□□□□□ -0.11
UBXN4-201ENST00000272638 CRNKL1Q9BZJ0 848 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms