RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 STX17P56962 302 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 NBPF11Q86T75 865 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 MIGA1Q8NAN2 632 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 ARHGEF2Q92974 986 aaKnown RBP14.09□□□□□ -0.15
CDH11-201ENST00000268603 VCXQ9H320 206 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 ANKRD50Q9ULJ7 1429 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 CALML3P27482 149 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 ACRBPQ8NEB7 543 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 SSFA2P28290 1259 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 ATP5DP30049 168 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 TTC30AQ86WT1 665 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 HACE1Q8IYU2 909 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 KIF9Q9HAQ2 790 aa14.09□□□□□ -0.15
CDH11-201ENST00000268603 TOM1O60784 492 aa14.08□□□□□ -0.15
CDH11-201ENST00000268603 RBM28Q9NW13 759 aaKnown RBP14.08□□□□□ -0.15
CDH11-201ENST00000268603 C11orf95C9JLR9 678 aaPredicted RBP14.08□□□□□ -0.16
CDH11-201ENST00000268603 BUB1BO60566 1050 aaPredicted RBP14.08□□□□□ -0.16
CDH11-201ENST00000268603 PLCG2P16885 1265 aa14.08□□□□□ -0.16
CDH11-201ENST00000268603 GPR162Q16538 588 aa14.08□□□□□ -0.16
CDH11-201ENST00000268603 TTC30BQ8N4P2 665 aa14.08□□□□□ -0.16
CDH11-201ENST00000268603 PDE6AP16499 860 aa14.08□□□□□ -0.16
CDH11-201ENST00000268603 RPL13P26373 211 aaKnown RBP14.08□□□□□ -0.16
CDH11-201ENST00000268603 DNM2P50570 870 aa14.08□□□□□ -0.16
CDH11-201ENST00000268603 SPAG1Q07617 926 aa14.08□□□□□ -0.16
CDH11-201ENST00000268603 KARSQ15046 597 aaKnown RBP14.08□□□□□ -0.16
CDH11-201ENST00000268603 TSHZ3Q63HK5 1081 aa14.08□□□□□ -0.16
CDH11-201ENST00000268603 SMCR8Q8TEV9 937 aaPredicted RBP14.08□□□□□ -0.16
CDH11-201ENST00000268603 NECAB1Q8N987 351 aa14.08□□□□□ -0.16
CDH11-201ENST00000268603 CCDC61Q9Y6R9 512 aa14.08□□□□□ -0.16
CDH11-201ENST00000268603 RNF217Q8TC41 542 aa14.08□□□□□ -0.16
CDH11-201ENST00000268603 ATAD2Q6PL18 1390 aa14.08□□□□□ -0.16
CDH11-201ENST00000268603 ERBINQ96RT1 1412 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 GOLGA6CA6NDK9 693 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 GOLGA6BA6NDN3 693 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 LDHBP07195 334 aaKnown RBP14.07□□□□□ -0.16
CDH11-201ENST00000268603 GOLGA6DP0CG33 693 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 IL1RL1Q01638 556 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 POMGNT1Q8WZA1 660 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 BRF1Q92994 677 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 RBM17Q96I25 401 aaKnown RBP14.07□□□□□ -0.16
CDH11-201ENST00000268603 GOLGA6AQ9NYA3 693 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 SFMBT1Q9UHJ3 866 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 ZNF365Q70YC5 407 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 NBPF3Q9H094 633 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 DTHD1Q6ZMT9 781 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 LCA5Q86VQ0 697 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 RAPGEF3O95398 923 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 PARP1P09874 1014 aaKnown RBP14.07□□□□□ -0.16
CDH11-201ENST00000268603 RNASE9P60153 205 aaKnown RBP14.07□□□□□ -0.16
CDH11-201ENST00000268603 TNNC1P63316 161 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 SPATA17Q96L03 361 aa14.07□□□□□ -0.16
CDH11-201ENST00000268603 TRIM56Q9BRZ2 755 aaKnown RBP14.07□□□□□ -0.16
CDH11-201ENST00000268603 FBXW4P57775 412 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 SLC9C2Q5TAH2 1124 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 MAGEB6Q8N7X4 407 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 HVCN1Q96D96 273 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 SLC52A1Q9NWF4 448 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 STK32BQ9NY57 414 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 RBM27Q9P2N5 1060 aaKnown RBP14.06□□□□□ -0.16
CDH11-201ENST00000268603 TOP2BQ02880 1626 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 RHOXF2BP0C7M4 288 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 GIMAP6Q6P9H5 292 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 RHOXF2Q9BQY4 288 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 ARHGEF10LQ9HCE6 1279 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 PRKAG2Q9UGJ0 569 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 FNDC3AQ9Y2H6 1198 aaKnown RBP14.06□□□□□ -0.16
CDH11-201ENST00000268603 RTL9Q8NET4 1388 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 SNRPA1P09661 255 aaKnown RBP14.06□□□□□ -0.16
CDH11-201ENST00000268603 TPTE2Q6XPS3 522 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 C10orf67Q8IYJ2 551 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 MCUR1Q96AQ8 359 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 ZKSCAN3Q9BRR0 538 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 XPAP23025 273 aaPredicted RBP14.06□□□□□ -0.16
CDH11-201ENST00000268603 CLNS1AP54105 237 aaKnown RBP14.06□□□□□ -0.16
CDH11-201ENST00000268603 PPARDQ03181 441 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 DCUN1D2Q6PH85 259 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 RUFY3Q7L099 469 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 AOPEPQ8N6M6 819 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 A0A1B0GUL7 405 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 HMGB1P1B2RPK0 211 aaPredicted RBP14.06□□□□□ -0.16
CDH11-201ENST00000268603 GNA11P29992 359 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDH11-201ENST00000268603 CCDC26Q8TAB7 109 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 CXorf38Q8TB03 319 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 ZSCAN16Q9H4T2 348 aaPredicted RBP14.06□□□□□ -0.16
CDH11-201ENST00000268603 NXNQ6DKJ4 435 aa14.06□□□□□ -0.16
CDH11-201ENST00000268603 KRT3P12035 628 aa14.05□□□□□ -0.16
CDH11-201ENST00000268603 CD19P15391 556 aa14.05□□□□□ -0.16
CDH11-201ENST00000268603 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
CDH11-201ENST00000268603 HMG20BQ9P0W2 317 aa14.05□□□□□ -0.16
CDH11-201ENST00000268603 A0A1B0GUA9 196 aa14.05□□□□□ -0.16
CDH11-201ENST00000268603 FAM170AA1A519 330 aa14.05□□□□□ -0.16
CDH11-201ENST00000268603 TRIM75PA6NK02 468 aa14.05□□□□□ -0.16
CDH11-201ENST00000268603 HPDP32754 393 aaPredicted RBP14.05□□□□□ -0.16
CDH11-201ENST00000268603 ACBD5Q5T8D3 534 aaPredicted RBP14.05□□□□□ -0.16
CDH11-201ENST00000268603 CCDC62Q6P9F0 684 aa14.05□□□□□ -0.16
CDH11-201ENST00000268603 LZTFL1Q9NQ48 299 aa14.05□□□□□ -0.16
CDH11-201ENST00000268603 TAOK1Q7L7X3 1001 aa14.05□□□□□ -0.16
CDH11-201ENST00000268603 NUCKS1Q9H1E3 243 aaKnown RBP14.05□□□□□ -0.16
CDH11-201ENST00000268603 ANO6Q4KMQ2 910 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms