RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 ECHDC1Q9NTX5 307 aa8.82□□□□□ -1
DEPDC1B-201ENST00000265036 AATFQ9NY61 560 aaKnown RBP eCLIP8.82□□□□□ -1
DEPDC1B-201ENST00000265036 PGAP2Q9UHJ9 254 aa8.82□□□□□ -1
DEPDC1B-201ENST00000265036 MROH7-TTC4A0A0A0MT08 1334 aa8.82□□□□□ -1
DEPDC1B-201ENST00000265036 SLURP2P0DP57 97 aa8.82□□□□□ -1
DEPDC1B-201ENST00000265036 AAMPQ13685 434 aa8.82□□□□□ -1
DEPDC1B-201ENST00000265036 RASA3Q14644 834 aa8.82□□□□□ -1
DEPDC1B-201ENST00000265036 NAA16Q6N069 864 aaPredicted RBP8.82□□□□□ -1
DEPDC1B-201ENST00000265036 CDC42EP5Q6NZY7 148 aa8.82□□□□□ -1
DEPDC1B-201ENST00000265036 PAG1Q9NWQ8 432 aa8.82□□□□□ -1
DEPDC1B-201ENST00000265036 SSC5DA1L4H1 1573 aa8.82□□□□□ -1
DEPDC1B-201ENST00000265036 TTLL12Q14166 644 aaPredicted RBP8.81□□□□□ -1
DEPDC1B-201ENST00000265036 SPTY2D1Q68D10 685 aaPredicted RBP8.81□□□□□ -1
DEPDC1B-201ENST00000265036 APOBEC3FQ8IUX4 373 aaKnown RBP8.81□□□□□ -1
DEPDC1B-201ENST00000265036 MTMR14Q8NCE2 650 aa8.81□□□□□ -1
DEPDC1B-201ENST00000265036 ZNF512BQ96KM6 892 aaPredicted RBP8.81□□□□□ -1
DEPDC1B-201ENST00000265036 SUGT1Q9Y2Z0 365 aa8.81□□□□□ -1
DEPDC1B-201ENST00000265036 ATP5JP18859 108 aa8.81□□□□□ -1
DEPDC1B-201ENST00000265036 CYP7A1P22680 504 aa8.81□□□□□ -1
DEPDC1B-201ENST00000265036 DYNLL1P63167 89 aaKnown RBP8.81□□□□□ -1
DEPDC1B-201ENST00000265036 NBPF12Q5TAG4 269 aaPredicted RBP8.81□□□□□ -1
DEPDC1B-201ENST00000265036 HHIPL2Q6UWX4 724 aa8.81□□□□□ -1
DEPDC1B-201ENST00000265036 CHD1LQ86WJ1 897 aa8.81□□□□□ -1
DEPDC1B-201ENST00000265036 GPATCH3Q96I76 525 aa8.81□□□□□ -1
DEPDC1B-201ENST00000265036 USP40Q9NVE5 1235 aa8.81□□□□□ -1
DEPDC1B-201ENST00000265036 TMOD2Q9NZR1 351 aa8.81□□□□□ -1
DEPDC1B-201ENST00000265036 GAKO14976 1311 aa8.81□□□□□ -1
DEPDC1B-201ENST00000265036 PITPNM2Q9BZ72 1349 aa8.81□□□□□ -1
DEPDC1B-201ENST00000265036 TMEM88BA6NKF7 163 aa8.8□□□□□ -1
DEPDC1B-201ENST00000265036 SLC9C2Q5TAH2 1124 aa8.8□□□□□ -1
DEPDC1B-201ENST00000265036 ZFPM1Q8IX07 1006 aa8.8□□□□□ -1
DEPDC1B-201ENST00000265036 PI4K2BQ8TCG2 481 aa8.8□□□□□ -1
DEPDC1B-201ENST00000265036 CNTNAP1P78357 1384 aa8.8□□□□□ -1
DEPDC1B-201ENST00000265036 OTOFQ9HC10 1997 aa8.8□□□□□ -1
DEPDC1B-201ENST00000265036 SALL3Q9BXA9 1300 aa8.8□□□□□ -1
DEPDC1B-201ENST00000265036 PDE6AP16499 860 aa8.8□□□□□ -1
DEPDC1B-201ENST00000265036 HDLBPQ00341 1268 aaKnown RBP8.8□□□□□ -1
DEPDC1B-201ENST00000265036 SH3RF3Q8TEJ3 882 aaPredicted RBP8.8□□□□□ -1
DEPDC1B-201ENST00000265036 HAUS7Q99871 368 aa8.8□□□□□ -1
DEPDC1B-201ENST00000265036 DDX4Q9NQI0 724 aaKnown RBP8.8□□□□□ -1
DEPDC1B-201ENST00000265036 CENPFP49454 3210 aa8.8□□□□□ -1
DEPDC1B-201ENST00000265036 ZNF532Q9HCE3 1301 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 RGS3P49796 1198 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 PDE1AP54750 535 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 HUNKP57058 714 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 NUCB1Q02818 461 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 MAP3K12Q12852 859 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 GBA2Q9HCG7 927 aaPredicted RBP8.79□□□□□ -1
DEPDC1B-201ENST00000265036 FAM198AQ9UFP1 575 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 BAZ2AQ9UIF9 1905 aaKnown RBP8.79□□□□□ -1
DEPDC1B-201ENST00000265036 FAM196BA6NMK8 535 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 WDHD1O75717 1129 aaPredicted RBP8.79□□□□□ -1
DEPDC1B-201ENST00000265036 PDE4AP27815 886 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 RHBDL3P58872 404 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 TNFAIP1Q13829 316 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 CYP4F22Q6NT55 531 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 MIGA2Q7L4E1 593 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 MAPKAPK5Q8IW41 473 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 ZSCAN29Q8IWY8 852 aaPredicted RBP8.79□□□□□ -1
DEPDC1B-201ENST00000265036 TEX11Q8IYF3 940 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 CREBZFQ9NS37 354 aa8.79□□□□□ -1
DEPDC1B-201ENST00000265036 GPR75-ASB3A0A0A6YYF3 556 aa8.78□□□□□ -1
DEPDC1B-201ENST00000265036 UBE2Q2LH0YL09 131 aa8.78□□□□□ -1
DEPDC1B-201ENST00000265036 GSTO1P78417 241 aa8.78□□□□□ -1
DEPDC1B-201ENST00000265036 MKRN3Q13064 507 aaKnown RBP8.78□□□□□ -1
DEPDC1B-201ENST00000265036 SAPCD2Q86UD0 394 aa8.78□□□□□ -1
DEPDC1B-201ENST00000265036 SLF2Q8IX21 1173 aa8.78□□□□□ -1
DEPDC1B-201ENST00000265036 CCDC136Q96JN2 1154 aa8.78□□□□□ -1
DEPDC1B-201ENST00000265036 TEPSINQ96N21 525 aa8.78□□□□□ -1
DEPDC1B-201ENST00000265036 NOL10Q9BSC4 688 aaKnown RBP8.78□□□□□ -1
DEPDC1B-201ENST00000265036 ANGEL1Q9UNK9 670 aaKnown RBP8.78□□□□□ -1
DEPDC1B-201ENST00000265036 FOCADQ5VW36 1801 aa8.78□□□□□ -1
DEPDC1B-201ENST00000265036 RFX7Q2KHR2 1363 aa8.78□□□□□ -1
DEPDC1B-201ENST00000265036 MYH1P12882 1939 aa8.78□□□□□ -1
DEPDC1B-201ENST00000265036 TTC41PQ6P2S7 1318 aa8.78□□□□□ -1
DEPDC1B-201ENST00000265036 NAV1Q8NEY1 1877 aa8.78□□□□□ -1
DEPDC1B-201ENST00000265036 GLRX3O76003 335 aaKnown RBP8.78□□□□□ -1
DEPDC1B-201ENST00000265036 TTF1Q15361 905 aaPredicted RBP8.78□□□□□ -1
DEPDC1B-201ENST00000265036 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.78□□□□□ -1
DEPDC1B-201ENST00000265036 TGFBRAP1Q8WUH2 860 aa8.78□□□□□ -1
DEPDC1B-201ENST00000265036 FSD1Q9BTV5 496 aa8.78□□□□□ -1
DEPDC1B-201ENST00000265036 SAP30BPQ9UHR5 308 aaKnown RBP8.78□□□□□ -1
DEPDC1B-201ENST00000265036 PAPPA2Q9BXP8 1791 aa8.78□□□□□ -1
DEPDC1B-201ENST00000265036 TRIM6-TRIM34B2RNG4 842 aa8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 ERC2O15083 957 aa8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 LDHCP07864 332 aa8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 NF2P35240 595 aa8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 TNNI2P48788 182 aa8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 MMP14P50281 582 aa8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 PLEKHM2Q8IWE5 1019 aa8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 LCORLQ8N3X6 602 aa8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 SDR42E1Q8WUS8 393 aa8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 CLMNQ96JQ2 1002 aa8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 CSRNP1Q96S65 589 aa8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 ARMT1Q9H993 441 aa8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 DDTLA6NHG4 134 aaPredicted RBP8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 MBD4O95243 580 aa8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 EVX2Q03828 476 aa8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 SH3BP5LQ7L8J4 393 aa8.77□□□□□ -1.01
DEPDC1B-201ENST00000265036 C2orf69Q8N8R5 385 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms